RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 IFT74Q96LB3 600 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 CLIP2Q9UDT6 1046 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
SRSF4-208ENST00000634348 TOP1P11387 765 aaKnown RBP13.05□□□□□ -0.32
SRSF4-208ENST00000634348 ZNF76P36508 570 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 SNW1Q13573 536 aaKnown RBP13.05□□□□□ -0.32
SRSF4-208ENST00000634348 PPFIA3O75145 1194 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 CIB2O75838 187 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 KRBA2Q6ZNG9 492 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 SLC12A5Q9H2X9 1139 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 TRIM21P19474 475 aaKnown RBP13.04□□□□□ -0.32
SRSF4-208ENST00000634348 MCM6Q14566 821 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 TRMT1Q9NXH9 659 aaKnown RBP13.04□□□□□ -0.32
SRSF4-208ENST00000634348 IDH1O75874 414 aaKnown RBP13.04□□□□□ -0.32
SRSF4-208ENST00000634348 GSDMDP57764 484 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 TXNDC2Q86VQ3 553 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 CCDC170Q8IYT3 715 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 SRGAP3O43295 1099 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 CABP4P57796 275 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 SATB1Q01826 763 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 NUTM1Q86Y26 1132 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 SPATS2LQ9NUQ6 558 aaKnown RBP13.04□□□□□ -0.32
SRSF4-208ENST00000634348 CCDC57Q2TAC2 916 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 POTEDQ86YR6 584 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.32
SRSF4-208ENST00000634348 IQCGQ9H095 443 aaKnown RBP13.04□□□□□ -0.32
SRSF4-208ENST00000634348 MKL2Q9ULH7 1088 aa13.04□□□□□ -0.32
SRSF4-208ENST00000634348 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
SRSF4-208ENST00000634348 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
SRSF4-208ENST00000634348 NUF2Q9BZD4 464 aa13.03□□□□□ -0.32
SRSF4-208ENST00000634348 BAZ1AQ9NRL2 1556 aaPredicted RBP13.03□□□□□ -0.32
SRSF4-208ENST00000634348 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
SRSF4-208ENST00000634348 CPLX4Q7Z7G2 160 aa13.03□□□□□ -0.32
SRSF4-208ENST00000634348 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
SRSF4-208ENST00000634348 CCDC38Q502W7 563 aa13.03□□□□□ -0.32
SRSF4-208ENST00000634348 TOM1L2Q6ZVM7 507 aa13.02□□□□□ -0.32
SRSF4-208ENST00000634348 PDRG1Q9NUG6 133 aa13.02□□□□□ -0.32
SRSF4-208ENST00000634348 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.32
SRSF4-208ENST00000634348 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.32
SRSF4-208ENST00000634348 GBP5Q96PP8 586 aa13.02□□□□□ -0.32
SRSF4-208ENST00000634348 GNL3LQ9NVN8 582 aaKnown RBP13.02□□□□□ -0.32
SRSF4-208ENST00000634348 PRC1O43663 620 aa13.02□□□□□ -0.32
SRSF4-208ENST00000634348 UBA5Q9GZZ9 404 aa13.02□□□□□ -0.32
SRSF4-208ENST00000634348 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.32
SRSF4-208ENST00000634348 CNTLNQ9NXG0 1405 aa13.02□□□□□ -0.32
SRSF4-208ENST00000634348 HIP1O00291 1037 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.33
SRSF4-208ENST00000634348 RRS1Q15050 365 aaKnown RBP13.02□□□□□ -0.33
SRSF4-208ENST00000634348 NACAP1Q9BZK3 213 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 TRIM7Q9C029 511 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 EXOC6BQ9Y2D4 811 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 PPP2R1AP30153 589 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 CTNNA2P26232 953 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 LRP2BPQ9P2M1 347 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 SMARCA5O60264 1052 aaPredicted RBP13.02□□□□□ -0.33
SRSF4-208ENST00000634348 FKBP15Q5T1M5 1219 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 PRAM1Q96QH2 718 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.33
SRSF4-208ENST00000634348 PLEKHO1Q53GL0 409 aaPredicted RBP13.01□□□□□ -0.33
SRSF4-208ENST00000634348 LCA5Q86VQ0 697 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 SAMD15Q9P1V8 674 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 SATB2Q9UPW6 733 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 CACNA2D4Q7Z3S7 1137 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 PHLDB2Q86SQ0 1253 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 XAB2Q9HCS7 855 aaKnown RBP13.01□□□□□ -0.33
SRSF4-208ENST00000634348 VPS18Q9P253 973 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 FAM69CQ0P6D2 419 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 CPLX3Q8WVH0 158 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 EPSTI1Q96J88 318 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 MINDY4BA8MYZ0 360 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 USP6NLQ92738 828 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
SRSF4-208ENST00000634348 NEDD9Q14511 834 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 CCDC96Q2M329 555 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 SLC4A8Q2Y0W8 1093 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 PABPN1LA6NDY0 278 aaKnown RBP13□□□□□ -0.33
SRSF4-208ENST00000634348 MTUS1Q9ULD2 1270 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13□□□□□ -0.33
SRSF4-208ENST00000634348 SLMAPQ14BN4 828 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 CEP85LQ5SZL2 805 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 ISM2Q6H9L7 571 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 TRIM4Q9C037 500 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 OGFRQ9NZT2 677 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 ZNF530Q6P9A1 599 aaPredicted RBP13□□□□□ -0.33
SRSF4-208ENST00000634348 GSDMBQ8TAX9 411 aa13□□□□□ -0.33
SRSF4-208ENST00000634348 COG7P83436 770 aa12.99□□□□□ -0.33
SRSF4-208ENST00000634348 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
SRSF4-208ENST00000634348 CHD1LQ86WJ1 897 aa12.99□□□□□ -0.33
SRSF4-208ENST00000634348 ANO10Q9NW15 660 aa12.99□□□□□ -0.33
SRSF4-208ENST00000634348 VPS41P49754 854 aa12.99□□□□□ -0.33
SRSF4-208ENST00000634348 MRFAP1L1Q96HT8 127 aa12.99□□□□□ -0.33
SRSF4-208ENST00000634348 CCDC183Q5T5S1 534 aa12.99□□□□□ -0.33
SRSF4-208ENST00000634348 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
SRSF4-208ENST00000634348 NBPF8Q3BBV2 869 aa12.99□□□□□ -0.33
SRSF4-208ENST00000634348 SMC1BQ8NDV3 1235 aa12.99□□□□□ -0.33
SRSF4-208ENST00000634348 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
SRSF4-208ENST00000634348 RLBP1P12271 317 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms