RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 HYPKQ9NX55 129 aa25■■□□□ 1.59
CROCCP4-202ENST00000633627 ERVV-1B6SEH8 477 aa24.99■■□□□ 1.59
CROCCP4-202ENST00000633627 MMP10P09238 476 aa24.99■■□□□ 1.59
CROCCP4-202ENST00000633627 CLEC4GQ6UXB4 293 aa24.99■■□□□ 1.59
CROCCP4-202ENST00000633627 MAP3K15Q6ZN16 1313 aa24.99■■□□□ 1.59
CROCCP4-202ENST00000633627 COPS6Q7L5N1 327 aa24.99■■□□□ 1.59
CROCCP4-202ENST00000633627 XAGE3Q8WTP9 111 aa24.99■■□□□ 1.59
CROCCP4-202ENST00000633627 NFIXQ14938 502 aa24.97■■□□□ 1.59
CROCCP4-202ENST00000633627 HLFQ16534 295 aa24.97■■□□□ 1.59
CROCCP4-202ENST00000633627 TCERG1O14776 1098 aaKnown RBP24.96■■□□□ 1.59
CROCCP4-202ENST00000633627 DDR1Q08345 913 aa24.96■■□□□ 1.59
CROCCP4-202ENST00000633627 KIF6Q6ZMV9 814 aa24.96■■□□□ 1.59
CROCCP4-202ENST00000633627 CACNA1FO60840 1977 aa24.96■■□□□ 1.59
CROCCP4-202ENST00000633627 AIMP1Q12904 312 aaKnown RBP24.95■■□□□ 1.58
CROCCP4-202ENST00000633627 TBC1D9BQ66K14 1250 aa24.95■■□□□ 1.58
CROCCP4-202ENST00000633627 STK31Q9BXU1 1019 aa24.95■■□□□ 1.58
CROCCP4-202ENST00000633627 PHAXQ9H814 394 aaKnown RBP24.95■■□□□ 1.58
CROCCP4-202ENST00000633627 NUP98P52948 1817 aa24.94■■□□□ 1.58
CROCCP4-202ENST00000633627 ZBTB3Q9H5J0 574 aa24.94■■□□□ 1.58
CROCCP4-202ENST00000633627 ZNF652Q9Y2D9 606 aa24.94■■□□□ 1.58
CROCCP4-202ENST00000633627 POLRMTO00411 1230 aaKnown RBP24.93■■□□□ 1.58
CROCCP4-202ENST00000633627 SLC4A2P04920 1241 aa24.93■■□□□ 1.58
CROCCP4-202ENST00000633627 GIGYF2Q6Y7W6 1299 aaKnown RBP24.92■■□□□ 1.58
CROCCP4-202ENST00000633627 PPP1R1BQ9UD71 204 aaPredicted RBP24.92■■□□□ 1.58
CROCCP4-202ENST00000633627 PARP3Q9Y6F1 533 aa24.92■■□□□ 1.58
CROCCP4-202ENST00000633627 BICDL1Q6ZP65 573 aa24.91■■□□□ 1.58
CROCCP4-202ENST00000633627 ANKRD13DQ6ZTN6 518 aa24.91■■□□□ 1.58
CROCCP4-202ENST00000633627 G2E3Q7L622 706 aa24.91■■□□□ 1.58
CROCCP4-202ENST00000633627 PLBD2Q8NHP8 589 aa24.91■■□□□ 1.58
CROCCP4-202ENST00000633627 ATP10DQ9P241 1426 aa24.9■■□□□ 1.58
CROCCP4-202ENST00000633627 CT47B1P0C2W7 299 aaPredicted RBP24.9■■□□□ 1.58
CROCCP4-202ENST00000633627 ZNF428Q96B54 188 aa24.9■■□□□ 1.58
CROCCP4-202ENST00000633627 SETDB2Q96T68 719 aa24.89■■□□□ 1.58
CROCCP4-202ENST00000633627 SERPINB2P05120 415 aa24.88■■□□□ 1.57
CROCCP4-202ENST00000633627 ZNF34Q8IZ26 560 aa24.88■■□□□ 1.57
CROCCP4-202ENST00000633627 NIP7Q9Y221 180 aaKnown RBP eCLIP24.88■■□□□ 1.57
CROCCP4-202ENST00000633627 NRXN2Q9P2S2 1712 aa24.88■■□□□ 1.57
CROCCP4-202ENST00000633627 AFDNP55196 1824 aaKnown RBP24.88■■□□□ 1.57
CROCCP4-202ENST00000633627 FHDC1Q9C0D6 1143 aaPredicted RBP24.87■■□□□ 1.57
CROCCP4-202ENST00000633627 CARMIL3Q8ND23 1372 aa24.87■■□□□ 1.57
CROCCP4-202ENST00000633627 FLIIQ13045 1269 aa24.86■■□□□ 1.57
CROCCP4-202ENST00000633627 TCIRG1Q13488 830 aa24.86■■□□□ 1.57
CROCCP4-202ENST00000633627 HSP90AB3PQ58FF7 597 aa24.85■■□□□ 1.57
CROCCP4-202ENST00000633627 SSH1Q8WYL5 1049 aa24.85■■□□□ 1.57
CROCCP4-202ENST00000633627 CD2APQ9Y5K6 639 aa24.85■■□□□ 1.57
CROCCP4-202ENST00000633627 C10orf71Q711Q0 1435 aa24.85■■□□□ 1.57
CROCCP4-202ENST00000633627 DDX58O95786 925 aaKnown RBP24.84■■□□□ 1.57
CROCCP4-202ENST00000633627 ALDH1L2Q3SY69 923 aa24.84■■□□□ 1.57
CROCCP4-202ENST00000633627 RIC3Q7Z5B4 369 aa24.84■■□□□ 1.57
CROCCP4-202ENST00000633627 MRPL50Q8N5N7 158 aaKnown RBP24.84■■□□□ 1.57
CROCCP4-202ENST00000633627 SYT17Q9BSW7 474 aa24.84■■□□□ 1.57
CROCCP4-202ENST00000633627 ARFGEF2Q9Y6D5 1785 aa24.84■■□□□ 1.57
CROCCP4-202ENST00000633627 KIF13BQ9NQT8 1826 aa24.84■■□□□ 1.57
CROCCP4-202ENST00000633627 UBN2Q6ZU65 1347 aa24.84■■□□□ 1.57
CROCCP4-202ENST00000633627 ANKRD36CQ5JPF3 1778 aa24.83■■□□□ 1.57
CROCCP4-202ENST00000633627 GPTP24298 496 aa24.83■■□□□ 1.57
CROCCP4-202ENST00000633627 KSR2Q6VAB6 950 aa24.83■■□□□ 1.57
CROCCP4-202ENST00000633627 ADCY9O60503 1353 aa24.82■■□□□ 1.56
CROCCP4-202ENST00000633627 PI4KAP2A4QPH2 592 aa24.82■■□□□ 1.56
CROCCP4-202ENST00000633627 PRR5LQ6MZQ0 368 aa24.82■■□□□ 1.56
CROCCP4-202ENST00000633627 PI4KAP1Q8N8J0 262 aa24.82■■□□□ 1.56
CROCCP4-202ENST00000633627 ISCA1Q9BUE6 129 aa24.82■■□□□ 1.56
CROCCP4-202ENST00000633627 PARP10Q53GL7 1025 aa24.81■■□□□ 1.56
CROCCP4-202ENST00000633627 RARSP54136 660 aaKnown RBP24.8■■□□□ 1.56
CROCCP4-202ENST00000633627 TRIM28Q13263 835 aaKnown RBP24.8■■□□□ 1.56
CROCCP4-202ENST00000633627 FKBP5Q13451 457 aaPredicted RBP24.8■■□□□ 1.56
CROCCP4-202ENST00000633627 SUSD4Q5VX71 490 aa24.8■■□□□ 1.56
CROCCP4-202ENST00000633627 KLHL34Q8N239 644 aa24.8■■□□□ 1.56
CROCCP4-202ENST00000633627 METTL22Q9BUU2 404 aaPredicted RBP24.8■■□□□ 1.56
CROCCP4-202ENST00000633627 MAP3K2Q9Y2U5 619 aa24.8■■□□□ 1.56
CROCCP4-202ENST00000633627 TPTE2Q6XPS3 522 aa24.79■■□□□ 1.56
CROCCP4-202ENST00000633627 NLRP10Q86W26 655 aa24.79■■□□□ 1.56
CROCCP4-202ENST00000633627 NBPF5PQ86XG9 351 aaPredicted RBP24.79■■□□□ 1.56
CROCCP4-202ENST00000633627 CNBD1Q8NA66 436 aa24.79■■□□□ 1.56
CROCCP4-202ENST00000633627 IBTKQ9P2D0 1353 aaPredicted RBP24.79■■□□□ 1.56
CROCCP4-202ENST00000633627 BRPF1P55201 1214 aaPredicted RBP24.78■■□□□ 1.56
CROCCP4-202ENST00000633627 NLGN2Q8NFZ4 835 aa24.78■■□□□ 1.56
CROCCP4-202ENST00000633627 BCL2L13Q9BXK5 485 aa24.78■■□□□ 1.56
CROCCP4-202ENST00000633627 FAM177BA6PVY3 158 aa24.77■■□□□ 1.56
CROCCP4-202ENST00000633627 ATP5J2-PTCD1G3V325 749 aa24.77■■□□□ 1.56
CROCCP4-202ENST00000633627 NTSR2O95665 410 aa24.77■■□□□ 1.56
CROCCP4-202ENST00000633627 NYXQ9GZU5 481 aa24.77■■□□□ 1.56
CROCCP4-202ENST00000633627 SMC4Q9NTJ3 1288 aa24.77■■□□□ 1.56
CROCCP4-202ENST00000633627 KIAA1551Q9HCM1 1747 aa24.76■■□□□ 1.55
CROCCP4-202ENST00000633627 CCDC24Q8N4L8 307 aa24.76■■□□□ 1.55
CROCCP4-202ENST00000633627 YTHDC1Q96MU7 727 aaKnown RBP24.76■■□□□ 1.55
CROCCP4-202ENST00000633627 MYD88Q99836 296 aa24.76■■□□□ 1.55
CROCCP4-202ENST00000633627 ANKRD31Q8N7Z5 1873 aa24.75■■□□□ 1.55
CROCCP4-202ENST00000633627 TGFB2P61812 414 aa24.75■■□□□ 1.55
CROCCP4-202ENST00000633627 PPP1R42Q7Z4L9 355 aa24.75■■□□□ 1.55
CROCCP4-202ENST00000633627 DNAAF4Q8WXU2 420 aa24.75■■□□□ 1.55
CROCCP4-202ENST00000633627 BRIP1Q9BX63 1249 aa24.75■■□□□ 1.55
CROCCP4-202ENST00000633627 IGKV5-2P06315 115 aa24.74■■□□□ 1.55
CROCCP4-202ENST00000633627 UTP14AQ9BVJ6 771 aaKnown RBP24.74■■□□□ 1.55
CROCCP4-202ENST00000633627 PXDNLA1KZ92 1463 aa24.74■■□□□ 1.55
CROCCP4-202ENST00000633627 PTPRCP08575 1304 aa24.73■■□□□ 1.55
CROCCP4-202ENST00000633627 F6X3S4 739 aa24.73■■□□□ 1.55
CROCCP4-202ENST00000633627 ST5P78524 1137 aa24.73■■□□□ 1.55
CROCCP4-202ENST00000633627 NUTM1Q86Y26 1132 aa24.73■■□□□ 1.55
CROCCP4-202ENST00000633627 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms