RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 CCDC24Q8N4L8 307 aa13.61□□□□□ -0.23
SOX2-OT-257ENST00000630553 BRIP1Q9BX63 1249 aa13.61□□□□□ -0.23
SOX2-OT-257ENST00000630553 BCL2L12Q9HB09 334 aa13.61□□□□□ -0.23
SOX2-OT-257ENST00000630553 ZBTB1Q9Y2K1 713 aa13.61□□□□□ -0.23
SOX2-OT-257ENST00000630553 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
SOX2-OT-257ENST00000630553 LTBP3Q9NS15 1303 aa13.61□□□□□ -0.23
SOX2-OT-257ENST00000630553 RASSF10A6NK89 507 aa13.6□□□□□ -0.23
SOX2-OT-257ENST00000630553 RGS19P49795 217 aa13.6□□□□□ -0.23
SOX2-OT-257ENST00000630553 SOGA3Q5TF21 947 aa13.6□□□□□ -0.23
SOX2-OT-257ENST00000630553 CNKSR1Q969H4 720 aa13.6□□□□□ -0.23
SOX2-OT-257ENST00000630553 HACL1Q9UJ83 578 aa13.6□□□□□ -0.23
SOX2-OT-257ENST00000630553 SCN4AP35499 1836 aa13.6□□□□□ -0.23
SOX2-OT-257ENST00000630553 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-257ENST00000630553 SLC39A6Q13433 755 aa13.59□□□□□ -0.23
SOX2-OT-257ENST00000630553 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
SOX2-OT-257ENST00000630553 L3MBTL3Q96JM7 780 aaPredicted RBP13.59□□□□□ -0.23
SOX2-OT-257ENST00000630553 CFAP53Q96M91 514 aa13.59□□□□□ -0.23
SOX2-OT-257ENST00000630553 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
SOX2-OT-257ENST00000630553 A0A087WZG4 1122 aa13.58□□□□□ -0.24
SOX2-OT-257ENST00000630553 EPHX2P34913 555 aa13.58□□□□□ -0.24
SOX2-OT-257ENST00000630553 TBC1D9BQ66K14 1250 aa13.58□□□□□ -0.24
SOX2-OT-257ENST00000630553 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
SOX2-OT-257ENST00000630553 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
SOX2-OT-257ENST00000630553 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
SOX2-OT-257ENST00000630553 SLC52A2Q9HAB3 445 aa13.58□□□□□ -0.24
SOX2-OT-257ENST00000630553 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
SOX2-OT-257ENST00000630553 ECE1P42892 770 aa13.57□□□□□ -0.24
SOX2-OT-257ENST00000630553 SULT6B1Q6IMI4 303 aa13.57□□□□□ -0.24
SOX2-OT-257ENST00000630553 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
SOX2-OT-257ENST00000630553 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
SOX2-OT-257ENST00000630553 ST5P78524 1137 aa13.56□□□□□ -0.24
SOX2-OT-257ENST00000630553 AKAP4Q5JQC9 854 aa13.56□□□□□ -0.24
SOX2-OT-257ENST00000630553 STYK1Q6J9G0 422 aa13.56□□□□□ -0.24
SOX2-OT-257ENST00000630553 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
SOX2-OT-257ENST00000630553 CNBD1Q8NA66 436 aa13.56□□□□□ -0.24
SOX2-OT-257ENST00000630553 CACNA1SQ13698 1873 aa13.56□□□□□ -0.24
SOX2-OT-257ENST00000630553 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 DLG5Q8TDM6 1919 aa13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 STARD3NLO95772 234 aa13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 MASTLQ96GX5 879 aa13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 CAPNS2Q96L46 248 aa13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 GPR101Q96P66 508 aaPredicted RBP13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 SETDB2Q96T68 719 aa13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 TSKSQ9UJT2 592 aa13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
SOX2-OT-257ENST00000630553 SIPA1L3O60292 1781 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 CNGB1Q14028 1251 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 CCDC93Q567U6 631 aa13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 VSIG10Q8N0Z9 540 aa13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 DDX21Q9NR30 783 aaKnown RBP eCLIP13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 ZNF277Q9NRM2 450 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 TBC1D2BQ9UPU7 963 aa13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 RNF123Q5XPI4 1314 aa13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 ZNF541Q9H0D2 1346 aa13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 MRC1P22897 1456 aa13.54□□□□□ -0.24
SOX2-OT-257ENST00000630553 SRGNP10124 158 aa13.53□□□□□ -0.24
SOX2-OT-257ENST00000630553 EIF5P55010 431 aaKnown RBP13.53□□□□□ -0.24
SOX2-OT-257ENST00000630553 CYP4F22Q6NT55 531 aa13.53□□□□□ -0.24
SOX2-OT-257ENST00000630553 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
SOX2-OT-257ENST00000630553 NUDCQ9Y266 331 aa13.53□□□□□ -0.24
SOX2-OT-257ENST00000630553 COL11A2P13942 1736 aaPredicted RBP13.53□□□□□ -0.24
SOX2-OT-257ENST00000630553 TNRC18O15417 2968 aaPredicted RBP13.52□□□□□ -0.24
SOX2-OT-257ENST00000630553 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-257ENST00000630553 ANP32CO43423 234 aa13.52□□□□□ -0.25
SOX2-OT-257ENST00000630553 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.25
SOX2-OT-257ENST00000630553 MCOLN1Q9GZU1 580 aa13.52□□□□□ -0.25
SOX2-OT-257ENST00000630553 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
SOX2-OT-257ENST00000630553 LMOD1P29536 600 aaPredicted RBP13.51□□□□□ -0.25
SOX2-OT-257ENST00000630553 PDE4DIPQ5VU43 2346 aa13.5□□□□□ -0.25
SOX2-OT-257ENST00000630553 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
SOX2-OT-257ENST00000630553 GPC2Q8N158 579 aa13.5□□□□□ -0.25
SOX2-OT-257ENST00000630553 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
SOX2-OT-257ENST00000630553 DGKZQ13574 1117 aa13.49□□□□□ -0.25
SOX2-OT-257ENST00000630553 NBPF5PQ86XG9 351 aaPredicted RBP13.49□□□□□ -0.25
SOX2-OT-257ENST00000630553 JDP2Q8WYK2 163 aa13.49□□□□□ -0.25
SOX2-OT-257ENST00000630553 FZD9O00144 591 aa13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 CA12O43570 354 aa13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 AOC2O75106 756 aa13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 NPR1P16066 1061 aa13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 MAP2K2P36507 400 aa13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 IARSP41252 1262 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 EIF6P56537 245 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 FMR1Q06787 632 aaKnown RBP eCLIP13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 C7orf43Q8WVR3 580 aa13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
SOX2-OT-257ENST00000630553 CASP8AP2Q9UKL3 1982 aa13.47□□□□□ -0.25
SOX2-OT-257ENST00000630553 U2SURPO15042 1029 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-257ENST00000630553 HMOX1P09601 288 aa13.47□□□□□ -0.25
SOX2-OT-257ENST00000630553 IL6STP40189 918 aaPredicted RBP13.47□□□□□ -0.25
SOX2-OT-257ENST00000630553 OLFM4Q6UX06 510 aa13.47□□□□□ -0.25
SOX2-OT-257ENST00000630553 SYNE4Q8N205 404 aa13.47□□□□□ -0.25
SOX2-OT-257ENST00000630553 PLEKHF1Q96S99 279 aa13.47□□□□□ -0.25
SOX2-OT-257ENST00000630553 ARFGEF2Q9Y6D5 1785 aa13.47□□□□□ -0.25
SOX2-OT-257ENST00000630553 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-257ENST00000630553 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
SOX2-OT-257ENST00000630553 TLL2Q9Y6L7 1015 aa13.46□□□□□ -0.25
SOX2-OT-257ENST00000630553 SCN7AQ01118 1682 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms