RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 SETDB2Q96T68 719 aa21.02■□□□□ 0.96
PNKP-222ENST00000629088 ERFEQ4G0M1 354 aa21.01■□□□□ 0.95
PNKP-222ENST00000629088 DPY19L2Q6NUT2 758 aa21.01■□□□□ 0.95
PNKP-222ENST00000629088 CNBD1Q8NA66 436 aa21■□□□□ 0.95
PNKP-222ENST00000629088 ZNF652Q9Y2D9 606 aa21■□□□□ 0.95
PNKP-222ENST00000629088 ANKRD31Q8N7Z5 1873 aa21■□□□□ 0.95
PNKP-222ENST00000629088 DCTN1Q14203 1278 aa20.99■□□□□ 0.95
PNKP-222ENST00000629088 PNISRQ8TF01 805 aaKnown RBP20.99■□□□□ 0.95
PNKP-222ENST00000629088 PNNQ9H307 717 aaKnown RBP20.99■□□□□ 0.95
PNKP-222ENST00000629088 ST5P78524 1137 aa20.98■□□□□ 0.95
PNKP-222ENST00000629088 PLEKHF1Q96S99 279 aa20.98■□□□□ 0.95
PNKP-222ENST00000629088 PRAMEF22A3QJZ6 481 aa20.97■□□□□ 0.95
PNKP-222ENST00000629088 NPHP1O15259 732 aa20.97■□□□□ 0.95
PNKP-222ENST00000629088 SRGNP10124 158 aa20.97■□□□□ 0.95
PNKP-222ENST00000629088 PIP4K2AP48426 406 aaPredicted RBP20.97■□□□□ 0.95
PNKP-222ENST00000629088 STYK1Q6J9G0 422 aa20.97■□□□□ 0.95
PNKP-222ENST00000629088 CNKSR1Q969H4 720 aa20.97■□□□□ 0.95
PNKP-222ENST00000629088 TAOK3Q9H2K8 898 aa20.97■□□□□ 0.95
PNKP-222ENST00000629088 LTBP3Q9NS15 1303 aa20.97■□□□□ 0.95
PNKP-222ENST00000629088 TIAM2Q8IVF5 1701 aa20.96■□□□□ 0.95
PNKP-222ENST00000629088 PRPF40BQ6NWY9 871 aaKnown RBP20.96■□□□□ 0.95
PNKP-222ENST00000629088 COL11A2P13942 1736 aaPredicted RBP20.95■□□□□ 0.94
PNKP-222ENST00000629088 LAMB4A4D0S4 1761 aa20.95■□□□□ 0.94
PNKP-222ENST00000629088 MASTLQ96GX5 879 aa20.95■□□□□ 0.94
PNKP-222ENST00000629088 NBPF26B4DH59 902 aa20.94■□□□□ 0.94
PNKP-222ENST00000629088 DDNO94850 711 aaPredicted RBP20.94■□□□□ 0.94
PNKP-222ENST00000629088 HSPA1AP0DMV8 641 aaKnown RBP20.94■□□□□ 0.94
PNKP-222ENST00000629088 HSPA1BP0DMV9 641 aaKnown RBP20.94■□□□□ 0.94
PNKP-222ENST00000629088 NFE2L2Q16236 605 aa20.94■□□□□ 0.94
PNKP-222ENST00000629088 NBPF10Q6P3W6 841 aaKnown RBP20.94■□□□□ 0.94
PNKP-222ENST00000629088 TNS4Q8IZW8 715 aa20.94■□□□□ 0.94
PNKP-222ENST00000629088 NBPF15Q8N660 670 aa20.94■□□□□ 0.94
PNKP-222ENST00000629088 DLG5Q8TDM6 1919 aa20.94■□□□□ 0.94
PNKP-222ENST00000629088 KDM3BQ7LBC6 1761 aa20.93■□□□□ 0.94
PNKP-222ENST00000629088 CAPN15O75808 1086 aa20.93■□□□□ 0.94
PNKP-222ENST00000629088 SOGA3Q5TF21 947 aa20.93■□□□□ 0.94
PNKP-222ENST00000629088 CCDC88AQ3V6T2 1871 aa20.92■□□□□ 0.94
PNKP-222ENST00000629088 POTEIP0CG38 1075 aa20.92■□□□□ 0.94
PNKP-222ENST00000629088 POTEJP0CG39 1038 aa20.92■□□□□ 0.94
PNKP-222ENST00000629088 RALBP1Q15311 655 aa20.92■□□□□ 0.94
PNKP-222ENST00000629088 CHADLQ6NUI6 762 aa20.92■□□□□ 0.94
PNKP-222ENST00000629088 NBPF5PQ86XG9 351 aaPredicted RBP20.92■□□□□ 0.94
PNKP-222ENST00000629088 C7orf43Q8WVR3 580 aa20.92■□□□□ 0.94
PNKP-222ENST00000629088 MAPK8IP3Q9UPT6 1336 aa20.92■□□□□ 0.94
PNKP-222ENST00000629088 FER1L6Q2WGJ9 1857 aa20.91■□□□□ 0.94
PNKP-222ENST00000629088 ARFGEF2Q9Y6D5 1785 aa20.91■□□□□ 0.94
PNKP-222ENST00000629088 KLRG2A4D1S0 409 aaPredicted RBP20.9■□□□□ 0.94
PNKP-222ENST00000629088 TPTE2Q6XPS3 522 aa20.9■□□□□ 0.94
PNKP-222ENST00000629088 EIF4A1P60842 406 aaKnown RBP20.89■□□□□ 0.93
PNKP-222ENST00000629088 MIS18AQ9NYP9 233 aa20.89■□□□□ 0.93
PNKP-222ENST00000629088 NIP7Q9Y221 180 aaKnown RBP eCLIP20.89■□□□□ 0.93
PNKP-222ENST00000629088 SLX4Q8IY92 1834 aa20.89■□□□□ 0.93
PNKP-222ENST00000629088 ERVV-1B6SEH8 477 aa20.88■□□□□ 0.93
PNKP-222ENST00000629088 NPR1P16066 1061 aa20.88■□□□□ 0.93
PNKP-222ENST00000629088 CREBZFQ9NS37 354 aa20.88■□□□□ 0.93
PNKP-222ENST00000629088 MKRN1Q9UHC7 482 aaKnown RBP20.88■□□□□ 0.93
PNKP-222ENST00000629088 CCDC93Q567U6 631 aa20.87■□□□□ 0.93
PNKP-222ENST00000629088 DICER1Q9UPY3 1922 aaKnown RBP20.86■□□□□ 0.93
PNKP-222ENST00000629088 ERBB4Q15303 1308 aa20.86■□□□□ 0.93
PNKP-222ENST00000629088 FAM177BA6PVY3 158 aa20.86■□□□□ 0.93
PNKP-222ENST00000629088 OLFM4Q6UX06 510 aa20.86■□□□□ 0.93
PNKP-222ENST00000629088 L3MBTL3Q96JM7 780 aaPredicted RBP20.85■□□□□ 0.93
PNKP-222ENST00000629088 TAF1DQ9H5J8 278 aaPredicted RBP20.85■□□□□ 0.93
PNKP-222ENST00000629088 ZNF277Q9NRM2 450 aaPredicted RBP20.85■□□□□ 0.93
PNKP-222ENST00000629088 BABAM1Q9NWV8 329 aa20.85■□□□□ 0.93
PNKP-222ENST00000629088 MAP3K15Q6ZN16 1313 aa20.84■□□□□ 0.93
PNKP-222ENST00000629088 IQCA1LA6NCM1 817 aa20.84■□□□□ 0.93
PNKP-222ENST00000629088 FKBP4Q02790 459 aaKnown RBP eCLIP20.84■□□□□ 0.93
PNKP-222ENST00000629088 HLFQ16534 295 aa20.84■□□□□ 0.93
PNKP-222ENST00000629088 THUMPD2Q9BTF0 503 aaKnown RBP20.84■□□□□ 0.93
PNKP-222ENST00000629088 NYXQ9GZU5 481 aa20.84■□□□□ 0.93
PNKP-222ENST00000629088 IBTKQ9P2D0 1353 aaPredicted RBP20.84■□□□□ 0.93
PNKP-222ENST00000629088 ZNF541Q9H0D2 1346 aa20.83■□□□□ 0.93
PNKP-222ENST00000629088 LMOD3Q0VAK6 560 aa20.83■□□□□ 0.93
PNKP-222ENST00000629088 LDHDQ86WU2 507 aa20.83■□□□□ 0.93
PNKP-222ENST00000629088 RIC1Q4ADV7 1423 aa20.83■□□□□ 0.93
PNKP-222ENST00000629088 PASKQ96RG2 1323 aa20.82■□□□□ 0.92
PNKP-222ENST00000629088 KIF6Q6ZMV9 814 aa20.82■□□□□ 0.92
PNKP-222ENST00000629088 CACNA1SQ13698 1873 aa20.81■□□□□ 0.92
PNKP-222ENST00000629088 MYBBP1AQ9BQG0 1328 aaKnown RBP20.81■□□□□ 0.92
PNKP-222ENST00000629088 GTF2E1P29083 439 aaPredicted RBP20.81■□□□□ 0.92
PNKP-222ENST00000629088 ALDH1B1P30837 517 aa20.81■□□□□ 0.92
PNKP-222ENST00000629088 RTKN2Q8IZC4 609 aa20.81■□□□□ 0.92
PNKP-222ENST00000629088 RIPK4P57078 832 aa20.8■□□□□ 0.92
PNKP-222ENST00000629088 CRY2Q49AN0 593 aa20.8■□□□□ 0.92
PNKP-222ENST00000629088 TSPYL4Q9UJ04 414 aa20.8■□□□□ 0.92
PNKP-222ENST00000629088 RRP7AQ9Y3A4 280 aaKnown RBP20.8■□□□□ 0.92
PNKP-222ENST00000629088 NUP98P52948 1817 aa20.79■□□□□ 0.92
PNKP-222ENST00000629088 ITGBL1O95965 494 aaPredicted RBP20.79■□□□□ 0.92
PNKP-222ENST00000629088 TMPOP42166 694 aaKnown RBP20.79■□□□□ 0.92
PNKP-222ENST00000629088 EAPPQ56P03 285 aaPredicted RBP20.79■□□□□ 0.92
PNKP-222ENST00000629088 SYNE4Q8N205 404 aa20.79■□□□□ 0.92
PNKP-222ENST00000629088 CNTNAP1P78357 1384 aa20.79■□□□□ 0.92
PNKP-222ENST00000629088 MYL6BP14649 208 aa20.78■□□□□ 0.92
PNKP-222ENST00000629088 TTLL7Q6ZT98 887 aa20.78■□□□□ 0.92
PNKP-222ENST00000629088 NGEFQ8N5V2 710 aa20.78■□□□□ 0.92
PNKP-222ENST00000629088 HACL1Q9UJ83 578 aa20.78■□□□□ 0.92
PNKP-222ENST00000629088 IARSP41252 1262 aaKnown RBP20.77■□□□□ 0.92
PNKP-222ENST00000629088 GIGYF2Q6Y7W6 1299 aaKnown RBP20.77■□□□□ 0.92
PNKP-222ENST00000629088 CLEC11AQ9Y240 323 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms