RNA–Protein interactions for RNA: ENST00000627784.2

TCF4-261, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-261ENST00000627784 C7orf43Q8WVR3 580 aa22.79■■□□□ 1.24
TCF4-261ENST00000627784 MASTLQ96GX5 879 aa22.79■■□□□ 1.24
TCF4-261ENST00000627784 PRAMEF22A3QJZ6 481 aa22.78■■□□□ 1.24
TCF4-261ENST00000627784 U2SURPO15042 1029 aaKnown RBP22.78■■□□□ 1.24
TCF4-261ENST00000627784 NPHP1O15259 732 aa22.78■■□□□ 1.24
TCF4-261ENST00000627784 FMNL2Q96PY5 1086 aa22.78■■□□□ 1.24
TCF4-261ENST00000627784 USP16Q9Y5T5 823 aa22.78■■□□□ 1.24
TCF4-261ENST00000627784 COL3A1P02461 1466 aaPredicted RBP22.78■■□□□ 1.24
TCF4-261ENST00000627784 CNTNAP1P78357 1384 aa22.77■■□□□ 1.24
TCF4-261ENST00000627784 CACNA1SQ13698 1873 aa22.77■■□□□ 1.24
TCF4-261ENST00000627784 ST5P78524 1137 aa22.77■■□□□ 1.24
TCF4-261ENST00000627784 CNGB1Q14028 1251 aaPredicted RBP22.77■■□□□ 1.24
TCF4-261ENST00000627784 OLFM4Q6UX06 510 aa22.77■■□□□ 1.24
TCF4-261ENST00000627784 DZIP3Q86Y13 1208 aaKnown RBP22.77■■□□□ 1.24
TCF4-261ENST00000627784 TAF1DQ9H5J8 278 aaPredicted RBP22.77■■□□□ 1.24
TCF4-261ENST00000627784 SIPA1L3O60292 1781 aaPredicted RBP22.76■■□□□ 1.23
TCF4-261ENST00000627784 GAS2L2Q8NHY3 880 aa22.76■■□□□ 1.23
TCF4-261ENST00000627784 ITGBL1O95965 494 aaPredicted RBP22.75■■□□□ 1.23
TCF4-261ENST00000627784 VEGFBP49765 207 aa22.75■■□□□ 1.23
TCF4-261ENST00000627784 LDHDQ86WU2 507 aa22.75■■□□□ 1.23
TCF4-261ENST00000627784 L3MBTL3Q96JM7 780 aaPredicted RBP22.75■■□□□ 1.23
TCF4-261ENST00000627784 PHACTR3Q96KR7 559 aa22.75■■□□□ 1.23
TCF4-261ENST00000627784 ZNF541Q9H0D2 1346 aa22.75■■□□□ 1.23
TCF4-261ENST00000627784 BTBD11A6QL63 1104 aa22.74■■□□□ 1.23
TCF4-261ENST00000627784 ZNF277Q9NRM2 450 aaPredicted RBP22.74■■□□□ 1.23
TCF4-261ENST00000627784 CEMIPQ8WUJ3 1361 aa22.74■■□□□ 1.23
TCF4-261ENST00000627784 IQCA1LA6NCM1 817 aa22.73■■□□□ 1.23
TCF4-261ENST00000627784 SOGA3Q5TF21 947 aa22.73■■□□□ 1.23
TCF4-261ENST00000627784 NPM2Q86SE8 214 aaKnown RBP22.73■■□□□ 1.23
TCF4-261ENST00000627784 NBPF5PQ86XG9 351 aaPredicted RBP22.73■■□□□ 1.23
TCF4-261ENST00000627784 EAPPQ56P03 285 aaPredicted RBP22.72■■□□□ 1.23
TCF4-261ENST00000627784 CCDC93Q567U6 631 aa22.71■■□□□ 1.23
TCF4-261ENST00000627784 BCORQ6W2J9 1755 aa22.71■■□□□ 1.23
TCF4-261ENST00000627784 ARFGEF2Q9Y6D5 1785 aa22.71■■□□□ 1.23
TCF4-261ENST00000627784 KLRG2A4D1S0 409 aaPredicted RBP22.7■■□□□ 1.22
TCF4-261ENST00000627784 TMEM88BA6NKF7 163 aa22.7■■□□□ 1.22
TCF4-261ENST00000627784 PRDM10Q9NQV6 1147 aa22.7■■□□□ 1.22
TCF4-261ENST00000627784 NPR1P16066 1061 aa22.69■■□□□ 1.22
TCF4-261ENST00000627784 FKBP4Q02790 459 aaKnown RBP eCLIP22.69■■□□□ 1.22
TCF4-261ENST00000627784 CLEC4GQ6UXB4 293 aa22.69■■□□□ 1.22
TCF4-261ENST00000627784 SCN4AP35499 1836 aa22.68■■□□□ 1.22
TCF4-261ENST00000627784 FAM177BA6PVY3 158 aa22.68■■□□□ 1.22
TCF4-261ENST00000627784 NBPF26B4DH59 902 aa22.68■■□□□ 1.22
TCF4-261ENST00000627784 NBPF10Q6P3W6 841 aaKnown RBP22.68■■□□□ 1.22
TCF4-261ENST00000627784 NBPF15Q8N660 670 aa22.68■■□□□ 1.22
TCF4-261ENST00000627784 CLEC11AQ9Y240 323 aa22.68■■□□□ 1.22
TCF4-261ENST00000627784 RNF123Q5XPI4 1314 aa22.67■■□□□ 1.22
TCF4-261ENST00000627784 PRKAR2BP31323 418 aa22.67■■□□□ 1.22
TCF4-261ENST00000627784 EPHX2P34913 555 aa22.67■■□□□ 1.22
TCF4-261ENST00000627784 CTCFP49711 727 aaPredicted RBP22.67■■□□□ 1.22
TCF4-261ENST00000627784 MAP1SQ66K74 1059 aaPredicted RBP22.67■■□□□ 1.22
TCF4-261ENST00000627784 RSPH6AQ9H0K4 717 aa22.67■■□□□ 1.22
TCF4-261ENST00000627784 WBP1LQ9NX94 342 aa22.67■■□□□ 1.22
TCF4-261ENST00000627784 HACL1Q9UJ83 578 aa22.67■■□□□ 1.22
TCF4-261ENST00000627784 LBX1P52954 281 aa22.66■■□□□ 1.22
TCF4-261ENST00000627784 NIP7Q9Y221 180 aaKnown RBP eCLIP22.66■■□□□ 1.22
TCF4-261ENST00000627784 HLFQ16534 295 aa22.65■■□□□ 1.22
TCF4-261ENST00000627784 TPTE2Q6XPS3 522 aa22.65■■□□□ 1.22
TCF4-261ENST00000627784 MCM10Q7L590 875 aa22.65■■□□□ 1.22
TCF4-261ENST00000627784 CNTROBQ8N137 903 aa22.65■■□□□ 1.22
TCF4-261ENST00000627784 SYNE4Q8N205 404 aa22.65■■□□□ 1.22
TCF4-261ENST00000627784 AIDAQ96BJ3 306 aa22.65■■□□□ 1.22
TCF4-261ENST00000627784 ADAMTSL1Q8N6G6 1762 aa22.65■■□□□ 1.22
TCF4-261ENST00000627784 FZD9O00144 591 aa22.64■■□□□ 1.21
TCF4-261ENST00000627784 SNRPA1P09661 255 aaKnown RBP22.64■■□□□ 1.21
TCF4-261ENST00000627784 IARSP41252 1262 aaKnown RBP22.63■■□□□ 1.21
TCF4-261ENST00000627784 DCTN1Q14203 1278 aa22.63■■□□□ 1.21
TCF4-261ENST00000627784 RTKN2Q8IZC4 609 aa22.63■■□□□ 1.21
TCF4-261ENST00000627784 ZNF652Q9Y2D9 606 aa22.63■■□□□ 1.21
TCF4-261ENST00000627784 RASSF10A6NK89 507 aa22.62■■□□□ 1.21
TCF4-261ENST00000627784 DEFB115Q30KQ5 88 aa22.62■■□□□ 1.21
TCF4-261ENST00000627784 SLC51AQ86UW1 340 aa22.62■■□□□ 1.21
TCF4-261ENST00000627784 FMR1Q06787 632 aaKnown RBP eCLIP22.61■■□□□ 1.21
TCF4-261ENST00000627784 CCER1Q8TC90 406 aaPredicted RBP22.61■■□□□ 1.21
TCF4-261ENST00000627784 NPC1L1Q9UHC9 1359 aa22.61■■□□□ 1.21
TCF4-261ENST00000627784 SNED1Q8TER0 1413 aa22.6■■□□□ 1.21
TCF4-261ENST00000627784 HSPA8P11142 646 aaKnown RBP22.6■■□□□ 1.21
TCF4-261ENST00000627784 COL4A5P29400 1685 aa22.6■■□□□ 1.21
TCF4-261ENST00000627784 PNMA8AQ86V59 439 aaPredicted RBP22.59■■□□□ 1.21
TCF4-261ENST00000627784 MIS18AQ9NYP9 233 aa22.59■■□□□ 1.21
TCF4-261ENST00000627784 WDR33Q9C0J8 1336 aaKnown RBP22.58■■□□□ 1.21
TCF4-261ENST00000627784 ALDH1B1P30837 517 aa22.58■■□□□ 1.21
TCF4-261ENST00000627784 NUTM1Q86Y26 1132 aa22.58■■□□□ 1.21
TCF4-261ENST00000627784 GPC2Q8N158 579 aa22.58■■□□□ 1.21
TCF4-261ENST00000627784 GJA3Q9Y6H8 435 aa22.57■■□□□ 1.2
TCF4-261ENST00000627784 ABCC12Q96J65 1359 aa22.57■■□□□ 1.2
TCF4-261ENST00000627784 GTF2E1P29083 439 aaPredicted RBP22.56■■□□□ 1.2
TCF4-261ENST00000627784 CRY2Q49AN0 593 aa22.56■■□□□ 1.2
TCF4-261ENST00000627784 NGEFQ8N5V2 710 aa22.56■■□□□ 1.2
TCF4-261ENST00000627784 RTF1Q92541 710 aaKnown RBP22.56■■□□□ 1.2
TCF4-261ENST00000627784 PSMD1Q99460 953 aa22.56■■□□□ 1.2
TCF4-261ENST00000627784 DDX21Q9NR30 783 aaKnown RBP eCLIP22.56■■□□□ 1.2
TCF4-261ENST00000627784 ABT1Q9ULW3 272 aaKnown RBP22.56■■□□□ 1.2
TCF4-261ENST00000627784 LTBP1Q14766 1721 aa22.56■■□□□ 1.2
TCF4-261ENST00000627784 RGL2O15211 777 aa22.55■■□□□ 1.2
TCF4-261ENST00000627784 JDP2Q8WYK2 163 aa22.55■■□□□ 1.2
TCF4-261ENST00000627784 ABHD8Q96I13 439 aa22.55■■□□□ 1.2
TCF4-261ENST00000627784 U2AF1L5P0DN76 240 aaPredicted RBP22.54■■□□□ 1.2
TCF4-261ENST00000627784 EPS15P42566 896 aa22.54■■□□□ 1.2
TCF4-261ENST00000627784 U2AF1Q01081 240 aaKnown RBP eCLIP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms