RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 ARHGEF25Q86VW2 580 aa23.1■■□□□ 1.29
PTBP1-220ENST00000627714 LRRC59Q96AG4 307 aaKnown RBP23.1■■□□□ 1.29
PTBP1-220ENST00000627714 RPAP1Q9BWH6 1393 aaPredicted RBP23.1■■□□□ 1.29
PTBP1-220ENST00000627714 TSPY26PQ9H489 355 aa23.1■■□□□ 1.29
PTBP1-220ENST00000627714 PXDNQ92626 1479 aa23.1■■□□□ 1.29
PTBP1-220ENST00000627714 MCM5P33992 734 aa23.09■■□□□ 1.29
PTBP1-220ENST00000627714 AK2P54819 239 aa23.09■■□□□ 1.29
PTBP1-220ENST00000627714 KLHL34Q8N239 644 aa23.09■■□□□ 1.29
PTBP1-220ENST00000627714 SIPA1L3O60292 1781 aaPredicted RBP23.09■■□□□ 1.29
PTBP1-220ENST00000627714 GCP02774 474 aa23.09■■□□□ 1.29
PTBP1-220ENST00000627714 TPM2P07951 284 aa23.09■■□□□ 1.29
PTBP1-220ENST00000627714 TM6SF1Q9BZW5 370 aa23.09■■□□□ 1.29
PTBP1-220ENST00000627714 ATP6V1DQ9Y5K8 247 aa23.09■■□□□ 1.29
PTBP1-220ENST00000627714 ADAMTS7Q9UKP4 1686 aa23.08■■□□□ 1.29
PTBP1-220ENST00000627714 ZBTB7CA1YPR0 619 aa23.08■■□□□ 1.29
PTBP1-220ENST00000627714 ANXA1P04083 346 aa23.08■■□□□ 1.29
PTBP1-220ENST00000627714 IFIT2P09913 472 aaKnown RBP23.08■■□□□ 1.29
PTBP1-220ENST00000627714 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.08■■□□□ 1.29
PTBP1-220ENST00000627714 EVI5LQ96CN4 794 aa23.08■■□□□ 1.29
PTBP1-220ENST00000627714 UTYO14607 1347 aa23.08■■□□□ 1.28
PTBP1-220ENST00000627714 HIP1O00291 1037 aa23.08■■□□□ 1.28
PTBP1-220ENST00000627714 DDX58O95786 925 aaKnown RBP23.08■■□□□ 1.28
PTBP1-220ENST00000627714 RASEFQ8IZ41 740 aa23.08■■□□□ 1.28
PTBP1-220ENST00000627714 LINS1Q8NG48 757 aa23.08■■□□□ 1.28
PTBP1-220ENST00000627714 KCNB2Q92953 911 aa23.08■■□□□ 1.28
PTBP1-220ENST00000627714 OFD1O75665 1012 aa23.07■■□□□ 1.28
PTBP1-220ENST00000627714 ZSCAN22P10073 491 aaPredicted RBP23.07■■□□□ 1.28
PTBP1-220ENST00000627714 USP48Q86UV5 1035 aa23.07■■□□□ 1.28
PTBP1-220ENST00000627714 ZNF500O60304 480 aaPredicted RBP23.06■■□□□ 1.28
PTBP1-220ENST00000627714 VPS53Q5VIR6 699 aa23.06■■□□□ 1.28
PTBP1-220ENST00000627714 RUFY3Q7L099 469 aa23.06■■□□□ 1.28
PTBP1-220ENST00000627714 ZSCAN31Q96LW9 406 aaPredicted RBP23.06■■□□□ 1.28
PTBP1-220ENST00000627714 CCDC39Q9UFE4 941 aa23.06■■□□□ 1.28
PTBP1-220ENST00000627714 FAM184AQ8NB25 1140 aa23.06■■□□□ 1.28
PTBP1-220ENST00000627714 SH2B1Q9NRF2 756 aaPredicted RBP23.06■■□□□ 1.28
PTBP1-220ENST00000627714 LETM1O95202 739 aaPredicted RBP23.05■■□□□ 1.28
PTBP1-220ENST00000627714 ANKRD24Q8TF21 1146 aa23.05■■□□□ 1.28
PTBP1-220ENST00000627714 SPG7Q9UQ90 795 aa23.05■■□□□ 1.28
PTBP1-220ENST00000627714 SMC3Q9UQE7 1217 aa23.05■■□□□ 1.28
PTBP1-220ENST00000627714 STX6O43752 255 aa23.05■■□□□ 1.28
PTBP1-220ENST00000627714 CASTP20810 708 aaKnown RBP23.05■■□□□ 1.28
PTBP1-220ENST00000627714 TERF1P54274 439 aa23.05■■□□□ 1.28
PTBP1-220ENST00000627714 GRM8O00222 908 aa23.04■■□□□ 1.28
PTBP1-220ENST00000627714 DDX21Q9NR30 783 aaKnown RBP eCLIP23.04■■□□□ 1.28
PTBP1-220ENST00000627714 PDIA4P13667 645 aaKnown RBP23.04■■□□□ 1.28
PTBP1-220ENST00000627714 CSPP1Q1MSJ5 1256 aa23.04■■□□□ 1.28
PTBP1-220ENST00000627714 ZKSCAN5Q9Y2L8 839 aa23.04■■□□□ 1.28
PTBP1-220ENST00000627714 ZSWIM6Q9HCJ5 1215 aa23.03■■□□□ 1.28
PTBP1-220ENST00000627714 SYT1P21579 422 aa23.02■■□□□ 1.28
PTBP1-220ENST00000627714 PROSER3Q2NL68 480 aa23.02■■□□□ 1.28
PTBP1-220ENST00000627714 CYP46A1Q9Y6A2 500 aa23.02■■□□□ 1.28
PTBP1-220ENST00000627714 ZKSCAN1P17029 563 aaPredicted RBP23.02■■□□□ 1.28
PTBP1-220ENST00000627714 UBE2HP62256 183 aa23.02■■□□□ 1.28
PTBP1-220ENST00000627714 UVSSAQ2YD98 709 aa23.02■■□□□ 1.28
PTBP1-220ENST00000627714 CCDC183Q5T5S1 534 aa23.02■■□□□ 1.28
PTBP1-220ENST00000627714 AACSQ86V21 672 aa23.02■■□□□ 1.28
PTBP1-220ENST00000627714 PDRG1Q9NUG6 133 aa23.02■■□□□ 1.28
PTBP1-220ENST00000627714 GADD45BO75293 160 aaPredicted RBP23.01■■□□□ 1.27
PTBP1-220ENST00000627714 F13A1P00488 732 aa23.01■■□□□ 1.27
PTBP1-220ENST00000627714 CCDC171Q6TFL3 1326 aa23.01■■□□□ 1.27
PTBP1-220ENST00000627714 G3BP1Q13283 466 aaKnown RBP eCLIP23.01■■□□□ 1.272e-9■□□□□ 9.4
PTBP1-220ENST00000627714 CWF19L2Q2TBE0 894 aaKnown RBP23.01■■□□□ 1.27
PTBP1-220ENST00000627714 SNRKQ9NRH2 765 aa23.01■■□□□ 1.27
PTBP1-220ENST00000627714 TRPM3Q9HCF6 1732 aaPredicted RBP23.01■■□□□ 1.27
PTBP1-220ENST00000627714 NECTIN1Q15223 517 aa23■■□□□ 1.27
PTBP1-220ENST00000627714 JAKMIP1Q96N16 626 aaKnown RBP23■■□□□ 1.27
PTBP1-220ENST00000627714 GDPD2Q9HCC8 539 aa23■■□□□ 1.27
PTBP1-220ENST00000627714 PTH1RQ03431 593 aa23■■□□□ 1.27
PTBP1-220ENST00000627714 PRPF40BQ6NWY9 871 aaKnown RBP23■■□□□ 1.27
PTBP1-220ENST00000627714 PA2G4Q9UQ80 394 aaKnown RBP23■■□□□ 1.27
PTBP1-220ENST00000627714 TCHHQ07283 1943 aa22.99■■□□□ 1.27
PTBP1-220ENST00000627714 MST1RQ04912 1400 aa22.99■■□□□ 1.27
PTBP1-220ENST00000627714 SUCLG2Q96I99 432 aa22.99■■□□□ 1.27
PTBP1-220ENST00000627714 KIF1AQ12756 1690 aa22.99■■□□□ 1.27
PTBP1-220ENST00000627714 RRP9O43818 475 aaKnown RBP22.98■■□□□ 1.27
PTBP1-220ENST00000627714 RNF214Q8ND24 703 aa22.98■■□□□ 1.27
PTBP1-220ENST00000627714 RBM33Q96EV2 1170 aaKnown RBP22.98■■□□□ 1.27
PTBP1-220ENST00000627714 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.98■■□□□ 1.27
PTBP1-220ENST00000627714 FOXD4L6Q3SYB3 417 aaPredicted RBP22.98■■□□□ 1.27
PTBP1-220ENST00000627714 FOXD4L3Q6VB84 417 aaPredicted RBP22.98■■□□□ 1.27
PTBP1-220ENST00000627714 CNPY2Q9Y2B0 182 aa22.98■■□□□ 1.27
PTBP1-220ENST00000627714 MRC1P22897 1456 aa22.97■■□□□ 1.27
PTBP1-220ENST00000627714 PSMA5P28066 241 aa22.97■■□□□ 1.27
PTBP1-220ENST00000627714 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
PTBP1-220ENST00000627714 BICC1Q9H694 974 aaKnown RBP22.97■■□□□ 1.27
PTBP1-220ENST00000627714 SASH1O94885 1247 aa22.97■■□□□ 1.27
PTBP1-220ENST00000627714 MAP4K1Q92918 833 aa22.97■■□□□ 1.27
PTBP1-220ENST00000627714 KAZALD1Q96I82 304 aa22.97■■□□□ 1.27
PTBP1-220ENST00000627714 GJB2P29033 226 aa22.96■■□□□ 1.27
PTBP1-220ENST00000627714 NEXNQ0ZGT2 675 aa22.96■■□□□ 1.27
PTBP1-220ENST00000627714 ORAI2Q96SN7 254 aa22.96■■□□□ 1.27
PTBP1-220ENST00000627714 NPHP4O75161 1426 aaPredicted RBP22.96■■□□□ 1.27
PTBP1-220ENST00000627714 ADCK5Q3MIX3 580 aa22.96■■□□□ 1.27
PTBP1-220ENST00000627714 RBM8AQ9Y5S9 174 aaKnown RBP22.96■■□□□ 1.27
PTBP1-220ENST00000627714 PDIA6Q15084 440 aa22.95■■□□□ 1.26
PTBP1-220ENST00000627714 RNF20Q5VTR2 975 aa22.95■■□□□ 1.26
PTBP1-220ENST00000627714 CREB3L3Q68CJ9 461 aa22.95■■□□□ 1.26
PTBP1-220ENST00000627714 CCDC83Q8IWF9 413 aa22.95■■□□□ 1.26
PTBP1-220ENST00000627714 EAF2Q96CJ1 260 aaPredicted RBP22.95■■□□□ 1.26
PTBP1-220ENST00000627714 PLEKHG2Q9H7P9 1386 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms