RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ZNF219Q9P2Y4 722 aaPredicted RBP14.85□□□□□ -0.03
SCN8A-209ENST00000627620 TBC1D9Q6ZT07 1266 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 GJB2P29033 226 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 TAF3Q5VWG9 929 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 FSIP1Q8NA03 581 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 TNPO1Q92973 898 aaKnown RBP14.85□□□□□ -0.03
SCN8A-209ENST00000627620 PIK3R4Q99570 1358 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 CHMP4BP1P59074 171 aa14.84□□□□□ -0.03
SCN8A-209ENST00000627620 CDC5LQ99459 802 aaKnown RBP14.84□□□□□ -0.03
SCN8A-209ENST00000627620 KIF5CO60282 957 aa14.84□□□□□ -0.03
SCN8A-209ENST00000627620 FGFR1OPO95684 399 aaKnown RBP14.84□□□□□ -0.03
SCN8A-209ENST00000627620 EZRP15311 586 aaKnown RBP14.84□□□□□ -0.03
SCN8A-209ENST00000627620 CLIP2Q9UDT6 1046 aa14.84□□□□□ -0.03
SCN8A-209ENST00000627620 ACEP12821 1306 aa14.84□□□□□ -0.03
SCN8A-209ENST00000627620 VPS36Q86VN1 386 aa14.84□□□□□ -0.03
SCN8A-209ENST00000627620 USP16Q9Y5T5 823 aa14.84□□□□□ -0.03
SCN8A-209ENST00000627620 TMEM67Q5HYA8 995 aa14.84□□□□□ -0.03
SCN8A-209ENST00000627620 ANKRD24Q8TF21 1146 aa14.84□□□□□ -0.03
SCN8A-209ENST00000627620 BMP2KLQ5H9B9 411 aa14.83□□□□□ -0.03
SCN8A-209ENST00000627620 CCDC144CPQ8IYA2 1237 aa14.83□□□□□ -0.03
SCN8A-209ENST00000627620 PLCD4Q9BRC7 762 aa14.83□□□□□ -0.03
SCN8A-209ENST00000627620 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.04
SCN8A-209ENST00000627620 HAND2P61296 217 aa14.83□□□□□ -0.04
SCN8A-209ENST00000627620 TSHZ3Q63HK5 1081 aa14.83□□□□□ -0.04
SCN8A-209ENST00000627620 TFIP11Q9UBB9 837 aaKnown RBP14.83□□□□□ -0.04
SCN8A-209ENST00000627620 KIF20AO95235 890 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 DDX19AQ9NUU7 478 aaKnown RBP14.82□□□□□ -0.04
SCN8A-209ENST00000627620 LDHCP07864 332 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 SNRPA1P09661 255 aaKnown RBP14.82□□□□□ -0.04
SCN8A-209ENST00000627620 NUP88Q99567 741 aaPredicted RBP14.82□□□□□ -0.04
SCN8A-209ENST00000627620 DISP3Q9P2K9 1392 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 STX6O43752 255 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 CASQ1P31415 396 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 CRACR2AQ9BSW2 395 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 GBP3Q9H0R5 595 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 GDPD2Q9HCC8 539 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 KIF4BQ2VIQ3 1234 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 TMCO3Q6UWJ1 677 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 DDX46Q7L014 1031 aaKnown RBP14.82□□□□□ -0.04
SCN8A-209ENST00000627620 CPLX3Q8WVH0 158 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 JARID2Q92833 1246 aaPredicted RBP14.82□□□□□ -0.04
SCN8A-209ENST00000627620 NEK1Q96PY6 1258 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 CALRP27797 417 aaKnown RBP14.82□□□□□ -0.04
SCN8A-209ENST00000627620 EHMT1Q9H9B1 1298 aa14.82□□□□□ -0.04
SCN8A-209ENST00000627620 KIF5BP33176 963 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 TTC22Q5TAA0 569 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 WDR78Q5VTH9 848 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 IL16Q14005 1332 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 BAG4O95429 457 aaKnown RBP14.81□□□□□ -0.04
SCN8A-209ENST00000627620 ANXA1P04083 346 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 PDE4BQ07343 736 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 MFSD6Q6ZSS7 791 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 PDCL2Q8N4E4 241 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 KIF18AQ8NI77 898 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 CCDC12Q8WUD4 166 aaPredicted RBP14.81□□□□□ -0.04
SCN8A-209ENST00000627620 TSPY2A6NKD2 308 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 URI1O94763 535 aaPredicted RBP14.81□□□□□ -0.04
SCN8A-209ENST00000627620 MICU3Q86XE3 530 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 DNAI2Q9GZS0 605 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 CHRNA2Q15822 529 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 VAT1LQ9HCJ6 419 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 ANKRD36BQ8N2N9 1353 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 BAG3O95817 575 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 NCOA7Q8NI08 942 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 ORC3Q9UBD5 711 aaPredicted RBP14.81□□□□□ -0.04
SCN8A-209ENST00000627620 USP25Q9UHP3 1055 aa14.81□□□□□ -0.04
SCN8A-209ENST00000627620 GRIN2AQ12879 1464 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 BIN1O00499 593 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 KAT14Q9H8E8 782 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 METAP2P50579 478 aaKnown RBP eCLIP14.8□□□□□ -0.04
SCN8A-209ENST00000627620 TTLL12Q14166 644 aaPredicted RBP14.8□□□□□ -0.04
SCN8A-209ENST00000627620 ANKRD13DQ6ZTN6 518 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 TCP11L1Q9NUJ3 509 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 CUL7Q14999 1698 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 YEATS4O95619 227 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 TDRD12Q587J7 1177 aaKnown RBP14.8□□□□□ -0.04
SCN8A-209ENST00000627620 RAB11FIP4Q86YS3 637 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 HMG20BQ9P0W2 317 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 DENND4BO75064 1496 aaPredicted RBP14.8□□□□□ -0.04
SCN8A-209ENST00000627620 CALML4Q96GE6 196 aa14.8□□□□□ -0.04
SCN8A-209ENST00000627620 PANK2Q9BZ23 570 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 IGHDP01880 384 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 USO1O60763 962 aaKnown RBP14.79□□□□□ -0.04
SCN8A-209ENST00000627620 PPFIA3O75145 1194 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 FBLN1P23142 703 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 DNA2P51530 1060 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 WDHD1O75717 1129 aaPredicted RBP14.79□□□□□ -0.04
SCN8A-209ENST00000627620 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
SCN8A-209ENST00000627620 MTIF2P46199 727 aaKnown RBP14.79□□□□□ -0.04
SCN8A-209ENST00000627620 CCDC178Q5BJE1 867 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 DHX29Q7Z478 1369 aaKnown RBP14.79□□□□□ -0.04
SCN8A-209ENST00000627620 AMPD3Q01432 767 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 SLC4A8Q2Y0W8 1093 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 SPTY2D1Q68D10 685 aaPredicted RBP14.79□□□□□ -0.04
SCN8A-209ENST00000627620 LUZP1Q86V48 1076 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 RHPN1Q8TCX5 695 aa14.79□□□□□ -0.04
SCN8A-209ENST00000627620 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCN8A-209ENST00000627620 RPRD2Q5VT52 1461 aaKnown RBP14.78□□□□□ -0.04
SCN8A-209ENST00000627620 IDEP14735 1019 aa14.78□□□□□ -0.04
SCN8A-209ENST00000627620 FEZ1Q99689 392 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms