RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 NLRP2Q9NX02 1062 aa20.62■□□□□ 0.89
FARP1-242ENST00000627049 MAGEC2Q9UBF1 373 aaPredicted RBP20.62■□□□□ 0.89
FARP1-242ENST00000627049 MAGI2Q86UL8 1455 aa20.62■□□□□ 0.89
FARP1-242ENST00000627049 U2AF2P26368 475 aaKnown RBP eCLIP20.62■□□□□ 0.894e-7■■□□□ 12.9
FARP1-242ENST00000627049 TMX4Q9H1E5 349 aaPredicted RBP20.62■□□□□ 0.89
FARP1-242ENST00000627049 HMG20BQ9P0W2 317 aa20.62■□□□□ 0.89
FARP1-242ENST00000627049 KIF5CO60282 957 aa20.62■□□□□ 0.89
FARP1-242ENST00000627049 USP8P40818 1118 aa20.62■□□□□ 0.89
FARP1-242ENST00000627049 KIF4BQ2VIQ3 1234 aa20.62■□□□□ 0.89
FARP1-242ENST00000627049 BRD1O95696 1058 aa20.61■□□□□ 0.89
FARP1-242ENST00000627049 STK11IPQ8N1F8 1099 aa20.61■□□□□ 0.89
FARP1-242ENST00000627049 ABCC2Q92887 1545 aa20.61■□□□□ 0.89
FARP1-242ENST00000627049 MYL6BP14649 208 aa20.61■□□□□ 0.89
FARP1-242ENST00000627049 FKBP4Q02790 459 aaKnown RBP eCLIP20.61■□□□□ 0.898e-8■■□□□ 12.7
FARP1-242ENST00000627049 PDE4CQ08493 712 aa20.61■□□□□ 0.89
FARP1-242ENST00000627049 NEK1Q96PY6 1258 aa20.61■□□□□ 0.89
FARP1-242ENST00000627049 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.61■□□□□ 0.89
FARP1-242ENST00000627049 KDM5BQ9UGL1 1544 aa20.61■□□□□ 0.89
FARP1-242ENST00000627049 GADD45BO75293 160 aaPredicted RBP20.6■□□□□ 0.89
FARP1-242ENST00000627049 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
FARP1-242ENST00000627049 KIF21AQ7Z4S6 1674 aa20.6■□□□□ 0.89
FARP1-242ENST00000627049 GOLGA6L9A6NEM1 432 aa20.6■□□□□ 0.89
FARP1-242ENST00000627049 PATL2C9JE40 543 aaKnown RBP20.6■□□□□ 0.89
FARP1-242ENST00000627049 CCT2P78371 535 aaKnown RBP20.6■□□□□ 0.89
FARP1-242ENST00000627049 RBM8AQ9Y5S9 174 aaKnown RBP20.6■□□□□ 0.89
FARP1-242ENST00000627049 PKP1Q13835 747 aa20.6■□□□□ 0.89
FARP1-242ENST00000627049 IMMTQ16891 758 aaKnown RBP20.6■□□□□ 0.89
FARP1-242ENST00000627049 RRP12Q5JTH9 1297 aaKnown RBP20.6■□□□□ 0.89
FARP1-242ENST00000627049 TXLNBQ8N3L3 684 aa20.6■□□□□ 0.89
FARP1-242ENST00000627049 TCEANC2Q96MN5 208 aa20.6■□□□□ 0.89
FARP1-242ENST00000627049 IBTKQ9P2D0 1353 aaPredicted RBP20.6■□□□□ 0.89
FARP1-242ENST00000627049 TXLNAP40222 546 aa20.59■□□□□ 0.89
FARP1-242ENST00000627049 GPT2Q8TD30 523 aa20.59■□□□□ 0.89
FARP1-242ENST00000627049 TSC1Q92574 1164 aa20.59■□□□□ 0.89
FARP1-242ENST00000627049 DNAI1Q9UI46 699 aa20.59■□□□□ 0.89
FARP1-242ENST00000627049 FAM193AP78312 1265 aa20.59■□□□□ 0.89
FARP1-242ENST00000627049 PIK3R4Q99570 1358 aa20.58■□□□□ 0.89
FARP1-242ENST00000627049 TUBB4AP04350 444 aa20.58■□□□□ 0.89
FARP1-242ENST00000627049 LMAN1P49257 510 aa20.58■□□□□ 0.89
FARP1-242ENST00000627049 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
FARP1-242ENST00000627049 CCDC69A6NI79 296 aa20.58■□□□□ 0.89
FARP1-242ENST00000627049 CRACR2AQ9BSW2 395 aa20.58■□□□□ 0.89
FARP1-242ENST00000627049 BCL2L12Q9HB09 334 aa20.58■□□□□ 0.89
FARP1-242ENST00000627049 KRT24Q2M2I5 525 aa20.58■□□□□ 0.88
FARP1-242ENST00000627049 GTF2E1P29083 439 aaPredicted RBP20.58■□□□□ 0.88
FARP1-242ENST00000627049 GNG11P61952 73 aa20.58■□□□□ 0.88
FARP1-242ENST00000627049 TTC21BQ7Z4L5 1316 aa20.58■□□□□ 0.88
FARP1-242ENST00000627049 GSPT1P15170 499 aaKnown RBP20.57■□□□□ 0.88
FARP1-242ENST00000627049 VPS53Q5VIR6 699 aa20.57■□□□□ 0.88
FARP1-242ENST00000627049 CD2BP2O95400 341 aaKnown RBP20.56■□□□□ 0.88
FARP1-242ENST00000627049 CCDC148Q8NFR7 591 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 PI4KAP2A4QPH2 592 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 IQCEQ6IPM2 695 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 PI4KAP1Q8N8J0 262 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 ARFGAP3Q9NP61 516 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 GABPB1Q06547 395 aaPredicted RBP20.56■□□□□ 0.88
FARP1-242ENST00000627049 AOPEPQ8N6M6 819 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 TMX1Q9H3N1 280 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 POTEB2H3BUK9 544 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 CEP126Q9P2H0 1117 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 A0A1W2PP64 1363 aa20.56■□□□□ 0.88
FARP1-242ENST00000627049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.55■□□□□ 0.88
FARP1-242ENST00000627049 PLCH2O75038 1416 aa20.55■□□□□ 0.88
FARP1-242ENST00000627049 ERBB4Q15303 1308 aa20.55■□□□□ 0.88
FARP1-242ENST00000627049 CCDC181Q5TID7 509 aa20.55■□□□□ 0.88
FARP1-242ENST00000627049 DBF4Q9UBU7 674 aaPredicted RBP20.55■□□□□ 0.88
FARP1-242ENST00000627049 SRRTQ9BXP5 876 aaKnown RBP20.55■□□□□ 0.88
FARP1-242ENST00000627049 MAP9Q49MG5 647 aa20.55■□□□□ 0.88
FARP1-242ENST00000627049 LARP1Q6PKG0 1096 aaKnown RBP20.55■□□□□ 0.88
FARP1-242ENST00000627049 BRF1Q92994 677 aa20.55■□□□□ 0.88
FARP1-242ENST00000627049 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
FARP1-242ENST00000627049 CNNM3Q8NE01 707 aa20.54■□□□□ 0.88
FARP1-242ENST00000627049 ERO1AQ96HE7 468 aa20.54■□□□□ 0.88
FARP1-242ENST00000627049 MSH6P52701 1360 aa20.54■□□□□ 0.88
FARP1-242ENST00000627049 STIM1Q13586 685 aa20.53■□□□□ 0.88
FARP1-242ENST00000627049 WASF1Q92558 559 aa20.53■□□□□ 0.88
FARP1-242ENST00000627049 MBD5Q9P267 1494 aa20.53■□□□□ 0.88
FARP1-242ENST00000627049 ZSCAN25Q6NSZ9 544 aa20.53■□□□□ 0.88
FARP1-242ENST00000627049 VPS37DQ86XT2 251 aa20.53■□□□□ 0.88
FARP1-242ENST00000627049 UBASH3AP57075 661 aa20.53■□□□□ 0.88
FARP1-242ENST00000627049 ISM2Q6H9L7 571 aa20.53■□□□□ 0.88
FARP1-242ENST00000627049 AMOTL1Q8IY63 956 aa20.53■□□□□ 0.88
FARP1-242ENST00000627049 MRPS27Q92552 414 aaKnown RBP20.52■□□□□ 0.88
FARP1-242ENST00000627049 PTPRTO14522 1441 aa20.52■□□□□ 0.88
FARP1-242ENST00000627049 POLR3DP05423 398 aaPredicted RBP20.52■□□□□ 0.88
FARP1-242ENST00000627049 ZFYVE9O95405 1425 aa20.52■□□□□ 0.88
FARP1-242ENST00000627049 CCDC12Q8WUD4 166 aaPredicted RBP20.52■□□□□ 0.87
FARP1-242ENST00000627049 GOLGA6L10A6NI86 522 aa20.51■□□□□ 0.87
FARP1-242ENST00000627049 MCM3P25205 808 aa20.51■□□□□ 0.87
FARP1-242ENST00000627049 KLHL10Q6JEL2 608 aa20.51■□□□□ 0.87
FARP1-242ENST00000627049 ZSWIM4Q9H7M6 989 aa20.51■□□□□ 0.87
FARP1-242ENST00000627049 CPA1P15085 419 aa20.51■□□□□ 0.87
FARP1-242ENST00000627049 RUFY3Q7L099 469 aa20.51■□□□□ 0.87
FARP1-242ENST00000627049 KIAA1328Q86T90 577 aa20.51■□□□□ 0.87
FARP1-242ENST00000627049 SOS1Q07889 1333 aaPredicted RBP20.51■□□□□ 0.87
FARP1-242ENST00000627049 TTC41PQ6P2S7 1318 aa20.51■□□□□ 0.87
FARP1-242ENST00000627049 PPFIA3O75145 1194 aa20.5■□□□□ 0.87
FARP1-242ENST00000627049 CCDC57Q2TAC2 916 aa20.5■□□□□ 0.87
FARP1-242ENST00000627049 CPLX3Q8WVH0 158 aa20.5■□□□□ 0.87
FARP1-242ENST00000627049 CEP131Q9UPN4 1083 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms