RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 ATF3P18847 181 aa18.34■□□□□ 0.53
LINC00552-201ENST00000625151 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
LINC00552-201ENST00000625151 IP6K1Q92551 441 aa18.34■□□□□ 0.53
LINC00552-201ENST00000625151 NFAT5O94916 1531 aa18.34■□□□□ 0.53
LINC00552-201ENST00000625151 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
LINC00552-201ENST00000625151 HOXB7P09629 217 aa18.34■□□□□ 0.53
LINC00552-201ENST00000625151 CPA1P15085 419 aa18.33■□□□□ 0.52
LINC00552-201ENST00000625151 CNPY2Q9Y2B0 182 aa18.33■□□□□ 0.52
LINC00552-201ENST00000625151 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
LINC00552-201ENST00000625151 CCDC39Q9UFE4 941 aa18.32■□□□□ 0.52
LINC00552-201ENST00000625151 OS9Q13438 667 aaPredicted RBP18.32■□□□□ 0.52
LINC00552-201ENST00000625151 TMEM87AQ8NBN3 555 aa18.32■□□□□ 0.52
LINC00552-201ENST00000625151 LIMCH1Q9UPQ0 1083 aa18.32■□□□□ 0.52
LINC00552-201ENST00000625151 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
LINC00552-201ENST00000625151 R3HCC1Q9Y3T6 440 aaKnown RBP18.31■□□□□ 0.52
LINC00552-201ENST00000625151 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
LINC00552-201ENST00000625151 BTBD11A6QL63 1104 aa18.31■□□□□ 0.52
LINC00552-201ENST00000625151 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
LINC00552-201ENST00000625151 LARGE1O95461 756 aa18.31■□□□□ 0.52
LINC00552-201ENST00000625151 ZSCAN22P10073 491 aaPredicted RBP18.31■□□□□ 0.52
LINC00552-201ENST00000625151 SYT1P21579 422 aa18.31■□□□□ 0.52
LINC00552-201ENST00000625151 ZBTB7CA1YPR0 619 aa18.3■□□□□ 0.52
LINC00552-201ENST00000625151 PHF14O94880 888 aa18.3■□□□□ 0.52
LINC00552-201ENST00000625151 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
LINC00552-201ENST00000625151 MPRIPQ6WCQ1 1025 aa18.3■□□□□ 0.52
LINC00552-201ENST00000625151 STX6O43752 255 aa18.3■□□□□ 0.52
LINC00552-201ENST00000625151 MCM5P33992 734 aa18.3■□□□□ 0.52
LINC00552-201ENST00000625151 PTH1RQ03431 593 aa18.3■□□□□ 0.52
LINC00552-201ENST00000625151 TEFQ10587 303 aa18.3■□□□□ 0.52
LINC00552-201ENST00000625151 LRRC59Q96AG4 307 aaKnown RBP18.3■□□□□ 0.52
LINC00552-201ENST00000625151 MTX1Q13505 466 aa18.29■□□□□ 0.52
LINC00552-201ENST00000625151 ZNF530Q6P9A1 599 aaPredicted RBP18.29■□□□□ 0.52
LINC00552-201ENST00000625151 DIAPH3Q9NSV4 1193 aa18.29■□□□□ 0.52
LINC00552-201ENST00000625151 DTNBO60941 627 aa18.29■□□□□ 0.52
LINC00552-201ENST00000625151 TPRNQ4KMQ1 711 aa18.29■□□□□ 0.52
LINC00552-201ENST00000625151 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.29■□□□□ 0.52
LINC00552-201ENST00000625151 TERF1P54274 439 aa18.28■□□□□ 0.52
LINC00552-201ENST00000625151 ADCK5Q3MIX3 580 aa18.28■□□□□ 0.52
LINC00552-201ENST00000625151 CLASRPQ8N2M8 674 aaKnown RBP18.28■□□□□ 0.52
LINC00552-201ENST00000625151 HYPKQ9NX55 129 aa18.28■□□□□ 0.52
LINC00552-201ENST00000625151 PA2G4Q9UQ80 394 aaKnown RBP18.28■□□□□ 0.52
LINC00552-201ENST00000625151 PXDNQ92626 1479 aa18.28■□□□□ 0.52
LINC00552-201ENST00000625151 PROSER3Q2NL68 480 aa18.28■□□□□ 0.52
LINC00552-201ENST00000625151 AKAP4Q5JQC9 854 aa18.28■□□□□ 0.52
LINC00552-201ENST00000625151 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
LINC00552-201ENST00000625151 SMC3Q9UQE7 1217 aa18.28■□□□□ 0.52
LINC00552-201ENST00000625151 MAP3K2Q9Y2U5 619 aa18.28■□□□□ 0.52
LINC00552-201ENST00000625151 F13A1P00488 732 aa18.27■□□□□ 0.52
LINC00552-201ENST00000625151 CCDC183Q5T5S1 534 aa18.27■□□□□ 0.52
LINC00552-201ENST00000625151 CADPS2Q86UW7 1296 aa18.27■□□□□ 0.52
LINC00552-201ENST00000625151 ECHDC1Q9NTX5 307 aa18.27■□□□□ 0.52
LINC00552-201ENST00000625151 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
LINC00552-201ENST00000625151 DCCP43146 1447 aa18.27■□□□□ 0.52
LINC00552-201ENST00000625151 PRPF40BQ6NWY9 871 aaKnown RBP18.27■□□□□ 0.51
LINC00552-201ENST00000625151 LMOD2Q6P5Q4 547 aa18.26■□□□□ 0.51
LINC00552-201ENST00000625151 CCDC83Q8IWF9 413 aa18.26■□□□□ 0.51
LINC00552-201ENST00000625151 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
LINC00552-201ENST00000625151 ZMYND15Q9H091 742 aa18.26■□□□□ 0.51
LINC00552-201ENST00000625151 C9orf78Q9NZ63 289 aaPredicted RBP18.26■□□□□ 0.51
LINC00552-201ENST00000625151 CWF19L2Q2TBE0 894 aaKnown RBP18.26■□□□□ 0.51
LINC00552-201ENST00000625151 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
LINC00552-201ENST00000625151 JAKMIP1Q96N16 626 aaKnown RBP18.26■□□□□ 0.51
LINC00552-201ENST00000625151 PHRF1Q9P1Y6 1649 aaKnown RBP18.25■□□□□ 0.51
LINC00552-201ENST00000625151 PRAMEF22A3QJZ6 481 aa18.25■□□□□ 0.51
LINC00552-201ENST00000625151 FIBPO43427 364 aa18.25■□□□□ 0.51
LINC00552-201ENST00000625151 PTMAP06454 111 aaKnown RBP18.25■□□□□ 0.51
LINC00552-201ENST00000625151 UBE2HP62256 183 aa18.25■□□□□ 0.51
LINC00552-201ENST00000625151 GJB2P29033 226 aa18.25■□□□□ 0.51
LINC00552-201ENST00000625151 TRPM3Q9HCF6 1732 aaPredicted RBP18.24■□□□□ 0.51
LINC00552-201ENST00000625151 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
LINC00552-201ENST00000625151 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
LINC00552-201ENST00000625151 VPS53Q5VIR6 699 aa18.24■□□□□ 0.51
LINC00552-201ENST00000625151 FAM184AQ8NB25 1140 aa18.24■□□□□ 0.51
LINC00552-201ENST00000625151 PDRG1Q9NUG6 133 aa18.24■□□□□ 0.51
LINC00552-201ENST00000625151 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
LINC00552-201ENST00000625151 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.24■□□□□ 0.51
LINC00552-201ENST00000625151 GIGYF1O75420 1035 aaPredicted RBP18.24■□□□□ 0.51
LINC00552-201ENST00000625151 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
LINC00552-201ENST00000625151 IFIT2P09913 472 aaKnown RBP18.24■□□□□ 0.51
LINC00552-201ENST00000625151 ST3GAL1Q11201 340 aa18.24■□□□□ 0.51
LINC00552-201ENST00000625151 CSPP1Q1MSJ5 1256 aa18.24■□□□□ 0.51
LINC00552-201ENST00000625151 DDX54Q8TDD1 881 aaKnown RBP18.24■□□□□ 0.51
LINC00552-201ENST00000625151 KSR2Q6VAB6 950 aa18.23■□□□□ 0.51
LINC00552-201ENST00000625151 AACSQ86V21 672 aa18.23■□□□□ 0.51
LINC00552-201ENST00000625151 KCNB2Q92953 911 aa18.23■□□□□ 0.51
LINC00552-201ENST00000625151 ZSWIM6Q9HCJ5 1215 aa18.23■□□□□ 0.51
LINC00552-201ENST00000625151 USP25Q9UHP3 1055 aa18.23■□□□□ 0.51
LINC00552-201ENST00000625151 HCLS1P14317 486 aaPredicted RBP18.23■□□□□ 0.51
LINC00552-201ENST00000625151 UVSSAQ2YD98 709 aa18.23■□□□□ 0.51
LINC00552-201ENST00000625151 MTMR6Q9Y217 621 aa18.23■□□□□ 0.51
LINC00552-201ENST00000625151 NECTIN1Q15223 517 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 MPNDQ8N594 471 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 GPATCH3Q96I76 525 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 CYP46A1Q9Y6A2 500 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 CCDC171Q6TFL3 1326 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 KIF1AQ12756 1690 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 ERC1Q8IUD2 1116 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 KCNH5Q8NCM2 988 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 EVI5LQ96CN4 794 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms