RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 CDC14CA4D256 554 aa6.1□□□□□ -1.43
CDKL5-208ENST00000624953 EFSO43281 561 aa6.1□□□□□ -1.43
CDKL5-208ENST00000624953 TBCELQ5QJ74 424 aa6.1□□□□□ -1.43
CDKL5-208ENST00000624953 SV2AQ7L0J3 742 aa6.1□□□□□ -1.43
CDKL5-208ENST00000624953 COL26A1Q96A83 441 aa6.1□□□□□ -1.43
CDKL5-208ENST00000624953 MYO19Q96H55 970 aa6.1□□□□□ -1.43
CDKL5-208ENST00000624953 CFHR5Q9BXR6 569 aa6.1□□□□□ -1.43
CDKL5-208ENST00000624953 NUCKS1Q9H1E3 243 aaKnown RBP6.1□□□□□ -1.43
CDKL5-208ENST00000624953 SUPT5HO00267 1087 aaKnown RBP6.09□□□□□ -1.43
CDKL5-208ENST00000624953 SVOPQ8N4V2 548 aa6.09□□□□□ -1.43
CDKL5-208ENST00000624953 RUBCNLQ9H714 662 aa6.09□□□□□ -1.43
CDKL5-208ENST00000624953 CABP1Q9NZU7 370 aa6.09□□□□□ -1.43
CDKL5-208ENST00000624953 PEG3Q9GZU2 1588 aa6.09□□□□□ -1.43
CDKL5-208ENST00000624953 ARHGEF15O94989 841 aa6.08□□□□□ -1.44
CDKL5-208ENST00000624953 FAM157BP0CG42 384 aa6.08□□□□□ -1.44
CDKL5-208ENST00000624953 GTF2E1P29083 439 aaPredicted RBP6.08□□□□□ -1.44
CDKL5-208ENST00000624953 NBPF1Q3BBV0 1214 aa6.08□□□□□ -1.44
CDKL5-208ENST00000624953 SCG3Q8WXD2 468 aaKnown RBP6.08□□□□□ -1.44
CDKL5-208ENST00000624953 QTRT2Q9H974 415 aaKnown RBP6.08□□□□□ -1.44
CDKL5-208ENST00000624953 CXXC1Q9P0U4 656 aaPredicted RBP6.08□□□□□ -1.44
CDKL5-208ENST00000624953 DMGDHQ9UI17 866 aaKnown RBP6.08□□□□□ -1.44
CDKL5-208ENST00000624953 PARP3Q9Y6F1 533 aa6.08□□□□□ -1.44
CDKL5-208ENST00000624953 BAZ1AQ9NRL2 1556 aaPredicted RBP6.07□□□□□ -1.44
CDKL5-208ENST00000624953 A0A1W2PNR3 127 aa6.07□□□□□ -1.44
CDKL5-208ENST00000624953 PPP1R12BO60237 982 aaPredicted RBP6.07□□□□□ -1.44
CDKL5-208ENST00000624953 IRS1P35568 1242 aa6.07□□□□□ -1.44
CDKL5-208ENST00000624953 FKBP5Q13451 457 aaPredicted RBP6.07□□□□□ -1.44
CDKL5-208ENST00000624953 FAM182BQ5T319 152 aa6.07□□□□□ -1.44
CDKL5-208ENST00000624953 IER5Q5VY09 327 aa6.07□□□□□ -1.44
CDKL5-208ENST00000624953 GTPBP3Q969Y2 492 aaKnown RBP6.07□□□□□ -1.44
CDKL5-208ENST00000624953 GAS2L1Q99501 681 aaPredicted RBP6.07□□□□□ -1.44
CDKL5-208ENST00000624953 PHACTR1Q9C0D0 580 aa6.07□□□□□ -1.44
CDKL5-208ENST00000624953 GPAMQ9HCL2 828 aa6.07□□□□□ -1.44
CDKL5-208ENST00000624953 BCS1LQ9Y276 419 aa6.07□□□□□ -1.44
CDKL5-208ENST00000624953 BNIP3LO60238 219 aa6.06□□□□□ -1.44
CDKL5-208ENST00000624953 KCNQ4P56696 695 aa6.06□□□□□ -1.44
CDKL5-208ENST00000624953 RTN1Q16799 776 aa6.06□□□□□ -1.44
CDKL5-208ENST00000624953 PHLDB3Q6NSJ2 640 aa6.06□□□□□ -1.44
CDKL5-208ENST00000624953 MDFIQ99750 246 aa6.06□□□□□ -1.44
CDKL5-208ENST00000624953 ZCCHC2Q9C0B9 1178 aaKnown RBP6.06□□□□□ -1.44
CDKL5-208ENST00000624953 ATXN7L1Q9ULK2 861 aaPredicted RBP6.06□□□□□ -1.44
CDKL5-208ENST00000624953 USTQ9Y2C2 406 aa6.06□□□□□ -1.44
CDKL5-208ENST00000624953 RBM19Q9Y4C8 960 aaKnown RBP6.06□□□□□ -1.44
CDKL5-208ENST00000624953 TATP17735 454 aaPredicted RBP6.05□□□□□ -1.44
CDKL5-208ENST00000624953 SSFA2P28290 1259 aa6.05□□□□□ -1.44
CDKL5-208ENST00000624953 SRSF11Q05519 484 aaKnown RBP6.05□□□□□ -1.44
CDKL5-208ENST00000624953 TNP2Q05952 138 aa6.05□□□□□ -1.44
CDKL5-208ENST00000624953 LAMC2Q13753 1193 aa6.05□□□□□ -1.44
CDKL5-208ENST00000624953 GPAT2Q6NUI2 795 aa6.05□□□□□ -1.44
CDKL5-208ENST00000624953 FIGNL1Q6PIW4 674 aa6.05□□□□□ -1.44
CDKL5-208ENST00000624953 LYPD4Q6UWN0 246 aa6.05□□□□□ -1.44
CDKL5-208ENST00000624953 ALDH16A1Q8IZ83 802 aa6.05□□□□□ -1.44
CDKL5-208ENST00000624953 MBIPQ9NS73 344 aa6.05□□□□□ -1.44
CDKL5-208ENST00000624953 PCDHGC4Q9Y5F7 938 aa6.05□□□□□ -1.44
CDKL5-208ENST00000624953 GRNP28799 593 aaKnown RBP6.04□□□□□ -1.44
CDKL5-208ENST00000624953 EFHC2Q5JST6 749 aa6.04□□□□□ -1.44
CDKL5-208ENST00000624953 RIPOR1Q6ZS17 1223 aa6.04□□□□□ -1.44
CDKL5-208ENST00000624953 LRRC4BQ9NT99 713 aa6.04□□□□□ -1.44
CDKL5-208ENST00000624953 LRFN2Q9ULH4 789 aa6.04□□□□□ -1.44
CDKL5-208ENST00000624953 WDR62O43379 1518 aa6.04□□□□□ -1.44
CDKL5-208ENST00000624953 BAZ1BQ9UIG0 1483 aaKnown RBP6.03□□□□□ -1.44
CDKL5-208ENST00000624953 GPR25O00155 361 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 C2CD2LO14523 706 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 TNFRSF10BO14763 440 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 LGR5O75473 907 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 ADAMTS2O95450 1211 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 CSB-PGBD3P0DP91 1061 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 TYRO3Q06418 890 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 PGBD3Q8N328 593 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 SUSD3Q96L08 255 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 HINFPQ9BQA5 517 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 HCN4Q9Y3Q4 1203 aa6.03□□□□□ -1.44
CDKL5-208ENST00000624953 TGFBR3LH3BV60 316 aa6.02□□□□□ -1.45
CDKL5-208ENST00000624953 RNF225M0QZC1 329 aaPredicted RBP6.02□□□□□ -1.45
CDKL5-208ENST00000624953 ATXN7O15265 892 aaPredicted RBP6.02□□□□□ -1.45
CDKL5-208ENST00000624953 MAPTP10636 758 aaKnown RBP6.02□□□□□ -1.45
CDKL5-208ENST00000624953 CAPN12Q6ZSI9 719 aa6.02□□□□□ -1.45
CDKL5-208ENST00000624953 ZNF280CQ8ND82 737 aa6.02□□□□□ -1.45
CDKL5-208ENST00000624953 AIDAQ96BJ3 306 aa6.02□□□□□ -1.45
CDKL5-208ENST00000624953 PRIMPOLQ96LW4 560 aa6.02□□□□□ -1.45
CDKL5-208ENST00000624953 STRN4Q9NRL3 753 aa6.02□□□□□ -1.45
CDKL5-208ENST00000624953 ZNF232Q9UNY5 417 aa6.02□□□□□ -1.45
CDKL5-208ENST00000624953 MROH2BQ7Z745 1585 aa6.01□□□□□ -1.45
CDKL5-208ENST00000624953 RIMBP3CA6NJZ7 1639 aa6.01□□□□□ -1.45
CDKL5-208ENST00000624953 RIMBP3BA6NNM3 1639 aa6.01□□□□□ -1.45
CDKL5-208ENST00000624953 RIMBP3Q9UFD9 1639 aa6.01□□□□□ -1.45
CDKL5-208ENST00000624953 PRMT3O60678 531 aa6.01□□□□□ -1.45
CDKL5-208ENST00000624953 FAM26DQ5JW98 314 aa6.01□□□□□ -1.45
CDKL5-208ENST00000624953 COX20Q5RI15 118 aa6.01□□□□□ -1.45
CDKL5-208ENST00000624953 RHPN1Q8TCX5 695 aa6.01□□□□□ -1.45
CDKL5-208ENST00000624953 ABHD17AQ96GS6 310 aa6.01□□□□□ -1.45
CDKL5-208ENST00000624953 AVENQ9NQS1 362 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-208ENST00000624953 PRDM2Q13029 1718 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 PTCD1O75127 700 aaKnown RBP6□□□□□ -1.45
CDKL5-208ENST00000624953 CELA2BP08218 269 aaPredicted RBP6□□□□□ -1.45
CDKL5-208ENST00000624953 FGFR3P22607 806 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 ATP2B4P23634 1241 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 MAP2K3P46734 347 aa6□□□□□ -1.45
CDKL5-208ENST00000624953 MARSP56192 900 aaKnown RBP6□□□□□ -1.45
CDKL5-208ENST00000624953 HIF1AQ16665 826 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms