RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 LRSAM1Q6UWE0 723 aa16.2■□□□□ 0.18
PCDHB17P-202ENST00000623466 TMEM51Q9NW97 253 aa16.2■□□□□ 0.18
PCDHB17P-202ENST00000623466 MX1P20591 662 aa16.19■□□□□ 0.18
PCDHB17P-202ENST00000623466 TMEM94Q12767 1356 aa16.19■□□□□ 0.18
PCDHB17P-202ENST00000623466 UPF3BQ9BZI7 483 aaKnown RBP16.19■□□□□ 0.18
PCDHB17P-202ENST00000623466 CEMIPQ8WUJ3 1361 aa16.19■□□□□ 0.18
PCDHB17P-202ENST00000623466 ZSCAN20P17040 1043 aaPredicted RBP16.18■□□□□ 0.18
PCDHB17P-202ENST00000623466 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
PCDHB17P-202ENST00000623466 ZNF830Q96NB3 372 aaPredicted RBP16.18■□□□□ 0.18
PCDHB17P-202ENST00000623466 IL25Q9H293 177 aa16.18■□□□□ 0.18
PCDHB17P-202ENST00000623466 SOS1Q07889 1333 aaPredicted RBP16.18■□□□□ 0.18
PCDHB17P-202ENST00000623466 RGPD2P0DJD1 1756 aa16.18■□□□□ 0.18
PCDHB17P-202ENST00000623466 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
PCDHB17P-202ENST00000623466 BEND3Q5T5X7 828 aa16.18■□□□□ 0.18
PCDHB17P-202ENST00000623466 OS9Q13438 667 aaPredicted RBP16.17■□□□□ 0.18
PCDHB17P-202ENST00000623466 ZKSCAN5Q9Y2L8 839 aa16.17■□□□□ 0.18
PCDHB17P-202ENST00000623466 ANO2Q9NQ90 1003 aa16.17■□□□□ 0.18
PCDHB17P-202ENST00000623466 C9orf78Q9NZ63 289 aaPredicted RBP16.17■□□□□ 0.18
PCDHB17P-202ENST00000623466 ERBB3P21860 1342 aa16.16■□□□□ 0.18
PCDHB17P-202ENST00000623466 ZNF500O60304 480 aaPredicted RBP16.16■□□□□ 0.18
PCDHB17P-202ENST00000623466 AMOTQ4VCS5 1084 aa16.16■□□□□ 0.18
PCDHB17P-202ENST00000623466 KLHDC4Q8TBB5 520 aa16.16■□□□□ 0.18
PCDHB17P-202ENST00000623466 NFAT5O94916 1531 aa16.16■□□□□ 0.18
PCDHB17P-202ENST00000623466 LTN1O94822 1766 aa16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 MTERF4Q7Z6M4 381 aaKnown RBP16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 LARP6Q9BRS8 491 aaKnown RBP16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 C1orf167Q5SNV9 1468 aa16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 GADD45BO75293 160 aaPredicted RBP16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 PTMAP06454 111 aaKnown RBP16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 HS1BP3Q53T59 392 aa16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 LRRC37A3O60309 1634 aa16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 TERF1P54274 439 aa16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 SIL1Q9H173 461 aa16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.15■□□□□ 0.18
PCDHB17P-202ENST00000623466 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
PCDHB17P-202ENST00000623466 RHPN1Q8TCX5 695 aa16.14■□□□□ 0.17
PCDHB17P-202ENST00000623466 ESYT1Q9BSJ8 1104 aa16.14■□□□□ 0.17
PCDHB17P-202ENST00000623466 BRD1O95696 1058 aa16.13■□□□□ 0.17
PCDHB17P-202ENST00000623466 ADCY9O60503 1353 aa16.13■□□□□ 0.17
PCDHB17P-202ENST00000623466 ZNF496Q96IT1 587 aaPredicted RBP16.13■□□□□ 0.17
PCDHB17P-202ENST00000623466 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
PCDHB17P-202ENST00000623466 SSH3Q8TE77 659 aa16.13■□□□□ 0.17
PCDHB17P-202ENST00000623466 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
PCDHB17P-202ENST00000623466 CCDC94Q9BW85 323 aaPredicted RBP16.12■□□□□ 0.17
PCDHB17P-202ENST00000623466 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
PCDHB17P-202ENST00000623466 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
PCDHB17P-202ENST00000623466 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
PCDHB17P-202ENST00000623466 DDX54Q8TDD1 881 aaKnown RBP16.11■□□□□ 0.17
PCDHB17P-202ENST00000623466 MBD3O95983 291 aa16.11■□□□□ 0.17
PCDHB17P-202ENST00000623466 TATP17735 454 aaPredicted RBP16.11■□□□□ 0.17
PCDHB17P-202ENST00000623466 CHMLP26374 656 aa16.11■□□□□ 0.17
PCDHB17P-202ENST00000623466 CBX1P83916 185 aa16.11■□□□□ 0.17
PCDHB17P-202ENST00000623466 TSPY26PQ9H489 355 aa16.11■□□□□ 0.17
PCDHB17P-202ENST00000623466 ZNF335Q9H4Z2 1342 aaPredicted RBP16.11■□□□□ 0.17
PCDHB17P-202ENST00000623466 ZBTB22O15209 634 aa16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 CYP27B1O15528 508 aa16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 COPS6Q7L5N1 327 aa16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 BABAM1Q9NWV8 329 aa16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 CCDC39Q9UFE4 941 aa16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 SALL3Q9BXA9 1300 aa16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 ATP5J2-PTCD1G3V325 749 aa16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 PTCD1O75127 700 aaKnown RBP16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 XAGE3Q8WTP9 111 aa16.1■□□□□ 0.17
PCDHB17P-202ENST00000623466 KSR2Q6VAB6 950 aa16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 USP48Q86UV5 1035 aa16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 TSC1Q92574 1164 aa16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 STRN4Q9NRL3 753 aa16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 STRCP1A6NGW2 1772 aa16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 DYNC1I1O14576 645 aa16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 CDK11BP21127 795 aaKnown RBP16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 PDIA6Q15084 440 aa16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 CWC27Q6UX04 472 aaKnown RBP16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 SUCLG2Q96I99 432 aa16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 CCDC8Q9H0W5 538 aaPredicted RBP16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 SPG7Q9UQ90 795 aa16.09■□□□□ 0.17
PCDHB17P-202ENST00000623466 PHKG2P15735 406 aa16.08■□□□□ 0.17
PCDHB17P-202ENST00000623466 C17orf53Q8N3J3 647 aaPredicted RBP16.08■□□□□ 0.17
PCDHB17P-202ENST00000623466 KIF20AO95235 890 aa16.08■□□□□ 0.16
PCDHB17P-202ENST00000623466 MCCP23508 829 aa16.08■□□□□ 0.16
PCDHB17P-202ENST00000623466 CUL4AQ13619 759 aa16.08■□□□□ 0.16
PCDHB17P-202ENST00000623466 DNTTIP2Q5QJE6 756 aaKnown RBP16.08■□□□□ 0.16
PCDHB17P-202ENST00000623466 MYD88Q99836 296 aa16.08■□□□□ 0.16
PCDHB17P-202ENST00000623466 NPHP3Q7Z494 1330 aa16.08■□□□□ 0.16
PCDHB17P-202ENST00000623466 BICC1Q9H694 974 aaKnown RBP16.08■□□□□ 0.16
PCDHB17P-202ENST00000623466 SLC52A2Q9HAB3 445 aa16.08■□□□□ 0.16
PCDHB17P-202ENST00000623466 PHRF1Q9P1Y6 1649 aaKnown RBP16.07■□□□□ 0.16
PCDHB17P-202ENST00000623466 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
PCDHB17P-202ENST00000623466 ZNF330Q9Y3S2 320 aaPredicted RBP16.07■□□□□ 0.16
PCDHB17P-202ENST00000623466 POLA2Q14181 598 aa16.07■□□□□ 0.16
PCDHB17P-202ENST00000623466 KAZALD1Q96I82 304 aa16.07■□□□□ 0.16
PCDHB17P-202ENST00000623466 TCHHQ07283 1943 aa16.06■□□□□ 0.16
PCDHB17P-202ENST00000623466 IGKV5-2P06315 115 aa16.06■□□□□ 0.16
PCDHB17P-202ENST00000623466 CPA1P15085 419 aa16.06■□□□□ 0.16
PCDHB17P-202ENST00000623466 NDUFB9Q9Y6M9 179 aa16.06■□□□□ 0.16
PCDHB17P-202ENST00000623466 PLCB2Q00722 1185 aa16.06■□□□□ 0.16
PCDHB17P-202ENST00000623466 CSPP1Q1MSJ5 1256 aa16.06■□□□□ 0.16
PCDHB17P-202ENST00000623466 EPHA10Q5JZY3 1008 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms