RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 ZBTB22O15209 634 aa7.37□□□□□ -1.23
EBF1-211ENST00000622875 SAMD1Q6SPF0 538 aaPredicted RBP7.37□□□□□ -1.23
EBF1-211ENST00000622875 EAPPQ56P03 285 aaPredicted RBP7.36□□□□□ -1.23
EBF1-211ENST00000622875 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
EBF1-211ENST00000622875 DDR1Q08345 913 aa7.36□□□□□ -1.23
EBF1-211ENST00000622875 DDX54Q8TDD1 881 aaKnown RBP7.36□□□□□ -1.23
EBF1-211ENST00000622875 CLEC11AQ9Y240 323 aa7.36□□□□□ -1.23
EBF1-211ENST00000622875 GNPATO15228 680 aa7.36□□□□□ -1.23
EBF1-211ENST00000622875 CALRP27797 417 aaKnown RBP7.36□□□□□ -1.23
EBF1-211ENST00000622875 CFHR5Q9BXR6 569 aa7.36□□□□□ -1.23
EBF1-211ENST00000622875 SOX1O00570 391 aaPredicted RBP7.36□□□□□ -1.23
EBF1-211ENST00000622875 TRAPPC3LQ5T215 181 aa7.36□□□□□ -1.23
EBF1-211ENST00000622875 CNKSR2Q8WXI2 1034 aa7.36□□□□□ -1.23
EBF1-211ENST00000622875 PLCD4Q9BRC7 762 aa7.36□□□□□ -1.23
EBF1-211ENST00000622875 SALL2Q9Y467 1007 aaPredicted RBP7.36□□□□□ -1.23
EBF1-211ENST00000622875 CFAP70Q5T0N1 1121 aa7.35□□□□□ -1.23
EBF1-211ENST00000622875 NLRP2Q9NX02 1062 aa7.35□□□□□ -1.23
EBF1-211ENST00000622875 RAPGEFL1Q9UHV5 662 aa7.35□□□□□ -1.23
EBF1-211ENST00000622875 TTC21AQ8NDW8 1320 aa7.35□□□□□ -1.23
EBF1-211ENST00000622875 POLRMTO00411 1230 aaKnown RBP7.35□□□□□ -1.23
EBF1-211ENST00000622875 SSC5DA1L4H1 1573 aa7.35□□□□□ -1.23
EBF1-211ENST00000622875 TM4SF1P30408 202 aa7.35□□□□□ -1.23
EBF1-211ENST00000622875 ARMC5Q96C12 935 aa7.35□□□□□ -1.23
EBF1-211ENST00000622875 MTMR10Q9NXD2 777 aa7.35□□□□□ -1.23
EBF1-211ENST00000622875 ZCRB1Q8TBF4 217 aaKnown RBP7.34□□□□□ -1.23
EBF1-211ENST00000622875 PGAP2Q9UHJ9 254 aa7.34□□□□□ -1.23
EBF1-211ENST00000622875 SLX4Q8IY92 1834 aa7.34□□□□□ -1.23
EBF1-211ENST00000622875 RRP9O43818 475 aaKnown RBP7.34□□□□□ -1.23
EBF1-211ENST00000622875 USP50Q70EL3 339 aaPredicted RBP7.34□□□□□ -1.23
EBF1-211ENST00000622875 CDK19Q9BWU1 502 aa7.34□□□□□ -1.23
EBF1-211ENST00000622875 RBM10P98175 930 aaKnown RBP7.34□□□□□ -1.23
EBF1-211ENST00000622875 TJP1Q07157 1748 aa7.34□□□□□ -1.23
EBF1-211ENST00000622875 ZIC5Q96T25 663 aa7.34□□□□□ -1.24
EBF1-211ENST00000622875 ZMYND15Q9H091 742 aa7.34□□□□□ -1.24
EBF1-211ENST00000622875 TAOK3Q9H2K8 898 aa7.34□□□□□ -1.24
EBF1-211ENST00000622875 MRC1P22897 1456 aa7.34□□□□□ -1.24
EBF1-211ENST00000622875 MAP3K12Q12852 859 aa7.33□□□□□ -1.24
EBF1-211ENST00000622875 SOGA3Q5TF21 947 aa7.33□□□□□ -1.24
EBF1-211ENST00000622875 ARHGEF1Q92888 912 aaKnown RBP7.33□□□□□ -1.24
EBF1-211ENST00000622875 P2RX7Q99572 595 aaKnown RBP7.33□□□□□ -1.24
EBF1-211ENST00000622875 ZNF541Q9H0D2 1346 aa7.33□□□□□ -1.24
EBF1-211ENST00000622875 LOC102724428A0A0B4J2F2 783 aa7.33□□□□□ -1.24
EBF1-211ENST00000622875 SIK1P57059 783 aa7.33□□□□□ -1.24
EBF1-211ENST00000622875 ANKRD24Q8TF21 1146 aa7.33□□□□□ -1.24
EBF1-211ENST00000622875 RTCBQ9Y3I0 505 aaKnown RBP7.33□□□□□ -1.24
EBF1-211ENST00000622875 TNFRSF10AO00220 468 aa7.33□□□□□ -1.24
EBF1-211ENST00000622875 ITPK1Q13572 414 aa7.33□□□□□ -1.24
EBF1-211ENST00000622875 CCDC102AQ96A19 550 aa7.33□□□□□ -1.24
EBF1-211ENST00000622875 GPC2Q8N158 579 aa7.32□□□□□ -1.24
EBF1-211ENST00000622875 GRM1Q13255 1194 aa7.32□□□□□ -1.24
EBF1-211ENST00000622875 A0A0C4DFX4 3053 aa7.32□□□□□ -1.24
EBF1-211ENST00000622875 FZD9O00144 591 aa7.32□□□□□ -1.24
EBF1-211ENST00000622875 RPS6KA4O75676 772 aa7.32□□□□□ -1.24
EBF1-211ENST00000622875 USP42Q9H9J4 1324 aaKnown RBP7.31□□□□□ -1.24
EBF1-211ENST00000622875 AXDND1Q5T1B0 1012 aaPredicted RBP7.31□□□□□ -1.24
EBF1-211ENST00000622875 RPTORQ8N122 1335 aa7.31□□□□□ -1.24
EBF1-211ENST00000622875 TMEM132AQ24JP5 1023 aa7.31□□□□□ -1.24
EBF1-211ENST00000622875 CLGNO14967 610 aa7.31□□□□□ -1.24
EBF1-211ENST00000622875 SRPK2P78362 688 aaKnown RBP7.31□□□□□ -1.24
EBF1-211ENST00000622875 COL2A1P02458 1487 aaPredicted RBP7.31□□□□□ -1.24
EBF1-211ENST00000622875 PPM1GO15355 546 aaPredicted RBP7.3□□□□□ -1.24
EBF1-211ENST00000622875 KIF23Q02241 960 aaPredicted RBP7.3□□□□□ -1.24
EBF1-211ENST00000622875 TAF3Q5VWG9 929 aa7.3□□□□□ -1.24
EBF1-211ENST00000622875 FAM109BQ6ICB4 259 aaPredicted RBP7.3□□□□□ -1.24
EBF1-211ENST00000622875 LRCH3Q96II8 777 aa7.3□□□□□ -1.24
EBF1-211ENST00000622875 TRPA1O75762 1119 aa7.3□□□□□ -1.24
EBF1-211ENST00000622875 PLCB2Q00722 1185 aa7.3□□□□□ -1.24
EBF1-211ENST00000622875 SETQ01105 290 aaPredicted RBP7.3□□□□□ -1.24
EBF1-211ENST00000622875 DEFB123Q8N688 67 aa7.3□□□□□ -1.24
EBF1-211ENST00000622875 ZNF296Q8WUU4 475 aaPredicted RBP7.3□□□□□ -1.24
EBF1-211ENST00000622875 TRAF5O00463 557 aa7.3□□□□□ -1.24
EBF1-211ENST00000622875 SLC10A3P09131 477 aa7.3□□□□□ -1.24
EBF1-211ENST00000622875 FOXK2Q01167 660 aa7.3□□□□□ -1.24
EBF1-211ENST00000622875 HDAC9Q9UKV0 1011 aa7.3□□□□□ -1.24
EBF1-211ENST00000622875 CELF2O95319 508 aaKnown RBP7.29□□□□□ -1.24
EBF1-211ENST00000622875 EN2P19622 333 aaPredicted RBP7.29□□□□□ -1.24
EBF1-211ENST00000622875 BMP8BP34820 402 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 RGMBQ6NW40 437 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 DHX37Q8IY37 1157 aaKnown RBP7.29□□□□□ -1.24
EBF1-211ENST00000622875 NKX1-1Q15270 411 aaPredicted RBP7.29□□□□□ -1.24
EBF1-211ENST00000622875 MAP7D2Q96T17 732 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 ZNF609O15014 1411 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 UNC80Q8N2C7 3258 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 AAMPQ13685 434 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 CCDC24Q8N4L8 307 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 CSRNP1Q96S65 589 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 TTC21BQ7Z4L5 1316 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 PCDH11XQ9BZA7 1347 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 PCDH11YQ9BZA8 1340 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 SNED1Q8TER0 1413 aa7.29□□□□□ -1.24
EBF1-211ENST00000622875 RFC4P35249 363 aa7.28□□□□□ -1.24
EBF1-211ENST00000622875 LRIT3Q3SXY7 679 aa7.28□□□□□ -1.24
EBF1-211ENST00000622875 TRAK1Q9UPV9 953 aa7.28□□□□□ -1.24
EBF1-211ENST00000622875 NBR1Q14596 966 aa7.28□□□□□ -1.24
EBF1-211ENST00000622875 RNF123Q5XPI4 1314 aa7.28□□□□□ -1.24
EBF1-211ENST00000622875 SCN7AQ01118 1682 aa7.28□□□□□ -1.24
EBF1-211ENST00000622875 PATL2C9JE40 543 aaKnown RBP7.28□□□□□ -1.24
EBF1-211ENST00000622875 TSHZ2Q9NRE2 1034 aa7.28□□□□□ -1.24
EBF1-211ENST00000622875 NAP1L2Q9ULW6 460 aaPredicted RBP7.28□□□□□ -1.24
EBF1-211ENST00000622875 C2CD5Q86YS7 1000 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms