RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 GIMAP6Q6P9H5 292 aa5.89□□□□□ -1.47
LRRC39-204ENST00000620882 ABTB2Q8N961 1025 aa5.89□□□□□ -1.47
LRRC39-204ENST00000620882 NUDT16Q96DE0 195 aaKnown RBP5.89□□□□□ -1.47
LRRC39-204ENST00000620882 ITPKCQ96DU7 683 aa5.89□□□□□ -1.47
LRRC39-204ENST00000620882 USP20Q9Y2K6 914 aa5.89□□□□□ -1.47
LRRC39-204ENST00000620882 ADH1AP07327 375 aa5.88□□□□□ -1.47
LRRC39-204ENST00000620882 MZF1P28698 734 aaPredicted RBP5.88□□□□□ -1.47
LRRC39-204ENST00000620882 CENPCQ03188 943 aa5.88□□□□□ -1.47
LRRC39-204ENST00000620882 CLN3Q13286 438 aa5.88□□□□□ -1.47
LRRC39-204ENST00000620882 PDE3BQ13370 1112 aa5.88□□□□□ -1.47
LRRC39-204ENST00000620882 USPL1Q5W0Q7 1092 aa5.88□□□□□ -1.47
LRRC39-204ENST00000620882 DHX38Q92620 1227 aaKnown RBP5.88□□□□□ -1.47
LRRC39-204ENST00000620882 IFT43Q96FT9 208 aa5.88□□□□□ -1.47
LRRC39-204ENST00000620882 CABP1Q9NZU7 370 aa5.88□□□□□ -1.47
LRRC39-204ENST00000620882 EIF1AYO14602 144 aaKnown RBP5.87□□□□□ -1.47
LRRC39-204ENST00000620882 GNA15P30679 374 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 IRS1P35568 1242 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 ZNF76P36508 570 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 RPIAP49247 311 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 RACK1P63244 317 aaKnown RBP5.87□□□□□ -1.47
LRRC39-204ENST00000620882 NR5A1Q13285 461 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 TEAD4Q15561 434 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 RTN1Q16799 776 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 TREML1Q86YW5 311 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 MPNDQ8N594 471 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 ZNF395Q9H8N7 513 aaPredicted RBP5.87□□□□□ -1.47
LRRC39-204ENST00000620882 C11orf91Q3C1V1 193 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 C7orf43Q8WVR3 580 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 RNF34Q969K3 372 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 KLF16Q9BXK1 252 aaPredicted RBP5.87□□□□□ -1.47
LRRC39-204ENST00000620882 TANGO6Q9C0B7 1094 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 ZFAND3Q9H8U3 227 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 CAPN10Q9HC96 672 aa5.87□□□□□ -1.47
LRRC39-204ENST00000620882 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.87□□□□□ -1.47
LRRC39-204ENST00000620882 MEN1O00255 615 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 RELBQ01201 579 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 NNTQ13423 1086 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 SF3A1Q15459 793 aaKnown RBP5.86□□□□□ -1.47
LRRC39-204ENST00000620882 C8orf34Q49A92 452 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 Q6ZNB5 142 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 DPH6Q7L8W6 267 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 ZNF280CQ8ND82 737 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 CSRNP1Q96S65 589 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 ALDH1A1P00352 501 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 ATP2B2Q01814 1243 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 MEI1Q5TIA1 1274 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 OSBPL7Q9BZF2 842 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 TGIF2Q9GZN2 237 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.86□□□□□ -1.47
LRRC39-204ENST00000620882 PRKAG2Q9UGJ0 569 aa5.86□□□□□ -1.47
LRRC39-204ENST00000620882 FOXD3Q9UJU5 478 aaPredicted RBP5.86□□□□□ -1.47
LRRC39-204ENST00000620882 WNT7AO00755 349 aa5.85□□□□□ -1.47
LRRC39-204ENST00000620882 CD2BP2O95400 341 aaKnown RBP5.85□□□□□ -1.47
LRRC39-204ENST00000620882 Q6ZVU0 165 aa5.85□□□□□ -1.47
LRRC39-204ENST00000620882 PPARGC1BQ86YN6 1023 aaKnown RBP5.85□□□□□ -1.47
LRRC39-204ENST00000620882 EPS8L3Q8TE67 593 aaKnown RBP5.85□□□□□ -1.47
LRRC39-204ENST00000620882 SPATA32Q96LK8 384 aa5.85□□□□□ -1.47
LRRC39-204ENST00000620882 METTL5Q9NRN9 209 aaKnown RBP5.85□□□□□ -1.47
LRRC39-204ENST00000620882 HSP90B1P14625 803 aaKnown RBP5.84□□□□□ -1.47
LRRC39-204ENST00000620882 TRIP4Q15650 581 aaPredicted RBP5.84□□□□□ -1.47
LRRC39-204ENST00000620882 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.84□□□□□ -1.47
LRRC39-204ENST00000620882 ALG1LQ6GMV1 187 aa5.84□□□□□ -1.47
LRRC39-204ENST00000620882 CRELD1Q96HD1 420 aa5.84□□□□□ -1.47
LRRC39-204ENST00000620882 HSH2DQ96JZ2 352 aa5.84□□□□□ -1.47
LRRC39-204ENST00000620882 CCSER2Q9H7U1 834 aa5.84□□□□□ -1.47
LRRC39-204ENST00000620882 PGPEP1Q9NXJ5 209 aa5.84□□□□□ -1.47
LRRC39-204ENST00000620882 DNAJA1P31689 397 aaKnown RBP5.84□□□□□ -1.48
LRRC39-204ENST00000620882 LNPKQ9C0E8 428 aa5.84□□□□□ -1.48
LRRC39-204ENST00000620882 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.84□□□□□ -1.48
LRRC39-204ENST00000620882 CHMP3Q9Y3E7 222 aa5.84□□□□□ -1.48
LRRC39-204ENST00000620882 AK5Q9Y6K8 562 aa5.84□□□□□ -1.48
LRRC39-204ENST00000620882 GRNP28799 593 aaKnown RBP5.83□□□□□ -1.48
LRRC39-204ENST00000620882 PTGIRP43119 386 aa5.83□□□□□ -1.48
LRRC39-204ENST00000620882 PLA2G4AP47712 749 aa5.83□□□□□ -1.48
LRRC39-204ENST00000620882 ZIC2O95409 532 aaPredicted RBP5.82□□□□□ -1.48
LRRC39-204ENST00000620882 USP5P45974 858 aa5.82□□□□□ -1.48
LRRC39-204ENST00000620882 C4orf17Q53FE4 359 aa5.82□□□□□ -1.48
LRRC39-204ENST00000620882 NBPF15Q8N660 670 aa5.82□□□□□ -1.48
LRRC39-204ENST00000620882 ZSCAN10Q96SZ4 725 aaPredicted RBP5.82□□□□□ -1.48
LRRC39-204ENST00000620882 BCL11AQ9H165 835 aa5.82□□□□□ -1.48
LRRC39-204ENST00000620882 SRA1Q9HD15 236 aaKnown RBP5.82□□□□□ -1.48
LRRC39-204ENST00000620882 DMGDHQ9UI17 866 aaKnown RBP5.82□□□□□ -1.48
LRRC39-204ENST00000620882 DDX41Q9UJV9 622 aaKnown RBP5.82□□□□□ -1.48
LRRC39-204ENST00000620882 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.82□□□□□ -1.48
LRRC39-204ENST00000620882 J3QL48 77 aa5.82□□□□□ -1.48
LRRC39-204ENST00000620882 MICAL2O94851 1124 aa5.82□□□□□ -1.48
LRRC39-204ENST00000620882 GTF2F1P35269 517 aaKnown RBP eCLIP5.82□□□□□ -1.48
LRRC39-204ENST00000620882 GGCXP38435 758 aa5.82□□□□□ -1.48
LRRC39-204ENST00000620882 NIFKQ9BYG3 293 aaKnown RBP5.82□□□□□ -1.48
LRRC39-204ENST00000620882 TNFRSF21O75509 655 aa5.81□□□□□ -1.48
LRRC39-204ENST00000620882 TIMP2P16035 220 aa5.81□□□□□ -1.48
LRRC39-204ENST00000620882 PHKA2P46019 1235 aa5.81□□□□□ -1.48
LRRC39-204ENST00000620882 ZNF662Q6ZS27 426 aa5.81□□□□□ -1.48
LRRC39-204ENST00000620882 FBF1Q8TES7 1133 aa5.81□□□□□ -1.48
LRRC39-204ENST00000620882 PKD2L1Q9P0L9 805 aa5.81□□□□□ -1.48
LRRC39-204ENST00000620882 HCSTQ9UBK5 93 aa5.81□□□□□ -1.48
LRRC39-204ENST00000620882 POLR3DP05423 398 aaPredicted RBP5.8□□□□□ -1.48
LRRC39-204ENST00000620882 TMEM214Q6NUQ4 689 aaKnown RBP5.8□□□□□ -1.48
LRRC39-204ENST00000620882 RHBDD1Q8TEB9 315 aa5.8□□□□□ -1.48
LRRC39-204ENST00000620882 NLRP3Q96P20 1036 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms