RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 DNM1Q05193 864 aaKnown RBP23.45■■□□□ 1.35
PDLIM3-212ENST00000620787 CCDC83Q8IWF9 413 aa23.45■■□□□ 1.35
PDLIM3-212ENST00000620787 TSC1Q92574 1164 aa23.45■■□□□ 1.35
PDLIM3-212ENST00000620787 NBPF7P0C2Y1 421 aaPredicted RBP23.45■■□□□ 1.34
PDLIM3-212ENST00000620787 PLEKHG1Q9ULL1 1385 aa23.44■■□□□ 1.34
PDLIM3-212ENST00000620787 PTH1RQ03431 593 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 VPS53Q5VIR6 699 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 TTC41PQ6P2S7 1318 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 ST3GAL1Q11201 340 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 ADCK5Q3MIX3 580 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 KCNF1Q9H3M0 494 aa23.43■■□□□ 1.34
PDLIM3-212ENST00000620787 DTNBO60941 627 aa23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 HOXC9P31274 260 aa23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 ESF1Q9H501 851 aaKnown RBP23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 PDRG1Q9NUG6 133 aa23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 KCNB2Q92953 911 aa23.42■■□□□ 1.34
PDLIM3-212ENST00000620787 GLRX3O76003 335 aaKnown RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 BEND3Q5T5X7 828 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 NGDNQ8NEJ9 315 aaKnown RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 KIAA1524Q8TCG1 905 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 ZSCAN31Q96LW9 406 aaPredicted RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 JAKMIP1Q96N16 626 aaKnown RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 ZSWIM6Q9HCJ5 1215 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 SH2B1Q9NRF2 756 aaPredicted RBP23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 DIAPH3Q9NSV4 1193 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 DIP2AQ14689 1571 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 KDM3BQ7LBC6 1761 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 LTKP29376 864 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 HSP90AB4PQ58FF6 505 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 TM6SF1Q9BZW5 370 aa23.41■■□□□ 1.34
PDLIM3-212ENST00000620787 PLCB2Q00722 1185 aa23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 RUFY2Q8WXA3 655 aa23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 PYCARDQ9ULZ3 195 aa23.4■■□□□ 1.34
PDLIM3-212ENST00000620787 USP54Q70EL1 1684 aa23.39■■□□□ 1.34
PDLIM3-212ENST00000620787 DNAAF4Q8WXU2 420 aa23.38■■□□□ 1.33
PDLIM3-212ENST00000620787 KIF3AQ9Y496 699 aa23.38■■□□□ 1.33
PDLIM3-212ENST00000620787 CYP46A1Q9Y6A2 500 aa23.38■■□□□ 1.33
PDLIM3-212ENST00000620787 ME3Q16798 604 aa23.38■■□□□ 1.33
PDLIM3-212ENST00000620787 VPS37CA5D8V6 355 aaPredicted RBP23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 TPM3P06753 285 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 EIF2S2P20042 333 aaKnown RBP23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 CEMIPQ8WUJ3 1361 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 CCDC192P0DO97 292 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 NLRP6P59044 892 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 CHPF2Q9P2E5 772 aa23.37■■□□□ 1.33
PDLIM3-212ENST00000620787 PI4KAP2A4QPH2 592 aa23.36■■□□□ 1.33
PDLIM3-212ENST00000620787 NECTIN1Q15223 517 aa23.36■■□□□ 1.33
PDLIM3-212ENST00000620787 PI4KAP1Q8N8J0 262 aa23.36■■□□□ 1.33
PDLIM3-212ENST00000620787 EIF4A1P60842 406 aaKnown RBP23.36■■□□□ 1.33
PDLIM3-212ENST00000620787 FAM177BA6PVY3 158 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 OS9Q13438 667 aaPredicted RBP23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 MTX1Q13505 466 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 TTC6Q86TZ1 520 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 NECAB1Q8N987 351 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 SPC24Q8NBT2 197 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 BCL2L12Q9HB09 334 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 ECHDC1Q9NTX5 307 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 ADCY9O60503 1353 aa23.35■■□□□ 1.33
PDLIM3-212ENST00000620787 CCDC171Q6TFL3 1326 aa23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 LTV1Q96GA3 475 aaPredicted RBP23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 PRDM10Q9NQV6 1147 aa23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 CLASRPQ8N2M8 674 aaKnown RBP23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 DDX54Q8TDD1 881 aaKnown RBP23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 TPCN1Q9ULQ1 816 aa23.34■■□□□ 1.33
PDLIM3-212ENST00000620787 HOXB7P09629 217 aa23.33■■□□□ 1.33
PDLIM3-212ENST00000620787 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.32
PDLIM3-212ENST00000620787 FAM200AQ8TCP9 573 aa23.33■■□□□ 1.32
PDLIM3-212ENST00000620787 AMOTL2Q9Y2J4 779 aa23.33■■□□□ 1.32
PDLIM3-212ENST00000620787 GOLGA6L6A8MZA4 724 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 NUTM2GQ5VZR2 741 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 RBM8AQ9Y5S9 174 aaKnown RBP23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 MRVI1Q9Y6F6 885 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 ELP1O95163 1332 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 LTN1O94822 1766 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 KRT85P78386 507 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 CDC37L1Q7L3B6 337 aa23.32■■□□□ 1.32
PDLIM3-212ENST00000620787 LIG1P18858 919 aa23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 MAP3K11Q16584 847 aa23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 LARP1BQ659C4 914 aaKnown RBP23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 CREB3L3Q68CJ9 461 aa23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 EVI5LQ96CN4 794 aa23.31■■□□□ 1.32
PDLIM3-212ENST00000620787 RIOK3O14730 519 aaKnown RBP23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 ANXA1P04083 346 aa23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 NUP62CLQ9H1M0 184 aa23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 ZKSCAN1P17029 563 aaPredicted RBP23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 TYRO3Q06418 890 aa23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 COL9A3Q14050 684 aaPredicted RBP23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 GPATCH3Q96I76 525 aa23.3■■□□□ 1.32
PDLIM3-212ENST00000620787 LGR6Q9HBX8 967 aa23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 KCNQ3O43525 872 aa23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 FERMT3Q86UX7 667 aa23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 MAP4K1Q92918 833 aa23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 PA2G4Q9UQ80 394 aaKnown RBP23.29■■□□□ 1.32
PDLIM3-212ENST00000620787 IFIT2P09913 472 aaKnown RBP23.28■■□□□ 1.32
PDLIM3-212ENST00000620787 ZSCAN20P17040 1043 aaPredicted RBP23.28■■□□□ 1.32
PDLIM3-212ENST00000620787 PPP4R3BQ5MIZ7 849 aa23.28■■□□□ 1.32
PDLIM3-212ENST00000620787 FAM173BQ6P4H8 233 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms