RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 FLIIQ13045 1269 aa12.53□□□□□ -0.4
TP53-225ENST00000619485 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
TP53-225ENST00000619485 CHPF2Q9P2E5 772 aa12.53□□□□□ -0.4
TP53-225ENST00000619485 CEMIPQ8WUJ3 1361 aa12.53□□□□□ -0.4
TP53-225ENST00000619485 DTNBO60941 627 aa12.52□□□□□ -0.4
TP53-225ENST00000619485 UNC5CLQ8IV45 518 aa12.52□□□□□ -0.4
TP53-225ENST00000619485 ZKSCAN5Q9Y2L8 839 aa12.52□□□□□ -0.4
TP53-225ENST00000619485 GADD45BO75293 160 aaPredicted RBP12.52□□□□□ -0.41
TP53-225ENST00000619485 DNTTIP2Q5QJE6 756 aaKnown RBP12.52□□□□□ -0.41
TP53-225ENST00000619485 NUTM1Q86Y26 1132 aa12.52□□□□□ -0.41
TP53-225ENST00000619485 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.41
TP53-225ENST00000619485 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
TP53-225ENST00000619485 TSPY26PQ9H489 355 aa12.52□□□□□ -0.41
TP53-225ENST00000619485 LRRFIP2Q9Y608 721 aaKnown RBP12.52□□□□□ -0.41
TP53-225ENST00000619485 ERBB3P21860 1342 aa12.52□□□□□ -0.41
TP53-225ENST00000619485 PHRF1Q9P1Y6 1649 aaKnown RBP12.52□□□□□ -0.41
TP53-225ENST00000619485 EIF4A1P60842 406 aaKnown RBP12.51□□□□□ -0.41
TP53-225ENST00000619485 BRINP3Q76B58 766 aa12.51□□□□□ -0.41
TP53-225ENST00000619485 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
TP53-225ENST00000619485 BCL11BQ9C0K0 894 aaPredicted RBP12.51□□□□□ -0.41
TP53-225ENST00000619485 BRD1O95696 1058 aa12.51□□□□□ -0.41
TP53-225ENST00000619485 CHMLP26374 656 aa12.51□□□□□ -0.41
TP53-225ENST00000619485 HS1BP3Q53T59 392 aa12.51□□□□□ -0.41
TP53-225ENST00000619485 HDGFL1Q5TGJ6 251 aa12.51□□□□□ -0.41
TP53-225ENST00000619485 CCDC39Q9UFE4 941 aa12.51□□□□□ -0.41
TP53-225ENST00000619485 COL18A1P39060 1754 aa12.51□□□□□ -0.41
TP53-225ENST00000619485 KDM3BQ7LBC6 1761 aa12.51□□□□□ -0.41
TP53-225ENST00000619485 LMO7Q8WWI1 1683 aa12.5□□□□□ -0.41
TP53-225ENST00000619485 MCM2P49736 904 aa12.5□□□□□ -0.41
TP53-225ENST00000619485 OSBPL3Q9H4L5 887 aa12.5□□□□□ -0.41
TP53-225ENST00000619485 PRDM4Q9UKN5 801 aa12.5□□□□□ -0.41
TP53-225ENST00000619485 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
TP53-225ENST00000619485 SYAP1Q96A49 352 aaPredicted RBP12.5□□□□□ -0.41
TP53-225ENST00000619485 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
TP53-225ENST00000619485 ZNF500O60304 480 aaPredicted RBP12.49□□□□□ -0.41
TP53-225ENST00000619485 USP48Q86UV5 1035 aa12.49□□□□□ -0.41
TP53-225ENST00000619485 ZNF830Q96NB3 372 aaPredicted RBP12.49□□□□□ -0.41
TP53-225ENST00000619485 IL25Q9H293 177 aa12.49□□□□□ -0.41
TP53-225ENST00000619485 KIF1AQ12756 1690 aa12.49□□□□□ -0.41
TP53-225ENST00000619485 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
TP53-225ENST00000619485 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
TP53-225ENST00000619485 GNAI3P08754 354 aa12.48□□□□□ -0.41
TP53-225ENST00000619485 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
TP53-225ENST00000619485 UBTFL1P0CB47 393 aaPredicted RBP12.47□□□□□ -0.41
TP53-225ENST00000619485 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
TP53-225ENST00000619485 NCAPD2Q15021 1401 aa12.47□□□□□ -0.41
TP53-225ENST00000619485 C5P01031 1676 aa12.47□□□□□ -0.41
TP53-225ENST00000619485 CAMTA1Q9Y6Y1 1673 aa12.47□□□□□ -0.41
TP53-225ENST00000619485 SURF6O75683 361 aaKnown RBP12.47□□□□□ -0.41
TP53-225ENST00000619485 CSB-PGBD3P0DP91 1061 aa12.47□□□□□ -0.41
TP53-225ENST00000619485 CUL4AQ13619 759 aa12.47□□□□□ -0.41
TP53-225ENST00000619485 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
TP53-225ENST00000619485 CCDC30Q5VVM6 783 aa12.47□□□□□ -0.41
TP53-225ENST00000619485 USP25Q9UHP3 1055 aa12.47□□□□□ -0.41
TP53-225ENST00000619485 CYP27B1O15528 508 aa12.46□□□□□ -0.41
TP53-225ENST00000619485 FIBPO43427 364 aa12.46□□□□□ -0.41
TP53-225ENST00000619485 PHF14O94880 888 aa12.46□□□□□ -0.41
TP53-225ENST00000619485 NBPF7P0C2Y1 421 aaPredicted RBP12.46□□□□□ -0.41
TP53-225ENST00000619485 TEFQ10587 303 aa12.46□□□□□ -0.41
TP53-225ENST00000619485 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
TP53-225ENST00000619485 USP44Q9H0E7 712 aa12.46□□□□□ -0.41
TP53-225ENST00000619485 CNPY2Q9Y2B0 182 aa12.46□□□□□ -0.41
TP53-225ENST00000619485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
TP53-225ENST00000619485 TNS3Q68CZ2 1445 aa12.46□□□□□ -0.41
TP53-225ENST00000619485 SPATA31A3Q5VYP0 1347 aa12.46□□□□□ -0.42
TP53-225ENST00000619485 HTATSF1O43719 755 aaKnown RBP12.46□□□□□ -0.42
TP53-225ENST00000619485 CPA1P15085 419 aa12.46□□□□□ -0.42
TP53-225ENST00000619485 ATP8B2P98198 1209 aa12.46□□□□□ -0.42
TP53-225ENST00000619485 PLEKHO1Q53GL0 409 aaPredicted RBP12.46□□□□□ -0.42
TP53-225ENST00000619485 SPOCK2Q92563 424 aa12.46□□□□□ -0.42
TP53-225ENST00000619485 SRCIN1Q9C0H9 1055 aa12.46□□□□□ -0.42
TP53-225ENST00000619485 ADCY9O60503 1353 aa12.45□□□□□ -0.42
TP53-225ENST00000619485 WDR33Q9C0J8 1336 aaKnown RBP12.45□□□□□ -0.42
TP53-225ENST00000619485 PI4KAP2A4QPH2 592 aa12.45□□□□□ -0.42
TP53-225ENST00000619485 KIAA2012Q0VF49 1180 aa12.45□□□□□ -0.42
TP53-225ENST00000619485 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
TP53-225ENST00000619485 PI4KAP1Q8N8J0 262 aa12.45□□□□□ -0.42
TP53-225ENST00000619485 NFATC2IPQ8NCF5 419 aa12.45□□□□□ -0.42
TP53-225ENST00000619485 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
TP53-225ENST00000619485 SIPA1L3O60292 1781 aaPredicted RBP12.45□□□□□ -0.42
TP53-225ENST00000619485 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
TP53-225ENST00000619485 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
TP53-225ENST00000619485 ANAPC15P60006 121 aa12.45□□□□□ -0.42
TP53-225ENST00000619485 C17orf53Q8N3J3 647 aaPredicted RBP12.45□□□□□ -0.42
TP53-225ENST00000619485 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
TP53-225ENST00000619485 AIMP1Q12904 312 aaKnown RBP12.44□□□□□ -0.42
TP53-225ENST00000619485 CWF19L2Q2TBE0 894 aaKnown RBP12.44□□□□□ -0.42
TP53-225ENST00000619485 C1orf141Q5JVX7 400 aa12.44□□□□□ -0.42
TP53-225ENST00000619485 DDX54Q8TDD1 881 aaKnown RBP12.44□□□□□ -0.42
TP53-225ENST00000619485 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
TP53-225ENST00000619485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.44□□□□□ -0.42
TP53-225ENST00000619485 OS9Q13438 667 aaPredicted RBP12.44□□□□□ -0.42
TP53-225ENST00000619485 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
TP53-225ENST00000619485 MCM5P33992 734 aa12.43□□□□□ -0.42
TP53-225ENST00000619485 PPP1R42Q7Z4L9 355 aa12.43□□□□□ -0.42
TP53-225ENST00000619485 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
TP53-225ENST00000619485 TTC12Q9H892 705 aaPredicted RBP12.43□□□□□ -0.42
TP53-225ENST00000619485 GIGYF1O75420 1035 aaPredicted RBP12.43□□□□□ -0.42
TP53-225ENST00000619485 SASS6Q6UVJ0 657 aa12.43□□□□□ -0.42
TP53-225ENST00000619485 CHMP3Q9Y3E7 222 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms