RNA–Protein interactions for RNA: ENST00000619368.4

RDM1-225, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-225ENST00000619368 NPM2Q86SE8 214 aaKnown RBP12.1□□□□□ -0.47
RDM1-225ENST00000619368 CNBD1Q8NA66 436 aa12.1□□□□□ -0.47
RDM1-225ENST00000619368 SMC1BQ8NDV3 1235 aa12.1□□□□□ -0.47
RDM1-225ENST00000619368 PDZRN3Q9UPQ7 1066 aa12.1□□□□□ -0.47
RDM1-225ENST00000619368 PCNTO95613 3336 aa12.09□□□□□ -0.47
RDM1-225ENST00000619368 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
RDM1-225ENST00000619368 SNRPA1P09661 255 aaKnown RBP12.09□□□□□ -0.47
RDM1-225ENST00000619368 SRGNP10124 158 aa12.09□□□□□ -0.47
RDM1-225ENST00000619368 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
RDM1-225ENST00000619368 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
RDM1-225ENST00000619368 RTF1Q92541 710 aaKnown RBP12.09□□□□□ -0.47
RDM1-225ENST00000619368 KLRG1Q96E93 195 aa12.09□□□□□ -0.47
RDM1-225ENST00000619368 NUP98P52948 1817 aa12.09□□□□□ -0.47
RDM1-225ENST00000619368 LAMB4A4D0S4 1761 aa12.08□□□□□ -0.48
RDM1-225ENST00000619368 NPHP1O15259 732 aa12.08□□□□□ -0.48
RDM1-225ENST00000619368 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
RDM1-225ENST00000619368 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
RDM1-225ENST00000619368 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
RDM1-225ENST00000619368 ST5P78524 1137 aa12.07□□□□□ -0.48
RDM1-225ENST00000619368 PRPF40BQ6NWY9 871 aaKnown RBP12.07□□□□□ -0.48
RDM1-225ENST00000619368 CLEC4GQ6UXB4 293 aa12.07□□□□□ -0.48
RDM1-225ENST00000619368 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
RDM1-225ENST00000619368 CNKSR1Q969H4 720 aa12.07□□□□□ -0.48
RDM1-225ENST00000619368 MASTLQ96GX5 879 aa12.07□□□□□ -0.48
RDM1-225ENST00000619368 MIS18AQ9NYP9 233 aa12.07□□□□□ -0.48
RDM1-225ENST00000619368 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
RDM1-225ENST00000619368 TAF7Q15545 349 aaPredicted RBP12.06□□□□□ -0.48
RDM1-225ENST00000619368 DPY19L2Q6NUT2 758 aa12.06□□□□□ -0.48
RDM1-225ENST00000619368 NBPF5PQ86XG9 351 aaPredicted RBP12.06□□□□□ -0.48
RDM1-225ENST00000619368 TAOK3Q9H2K8 898 aa12.06□□□□□ -0.48
RDM1-225ENST00000619368 LTBP3Q9NS15 1303 aa12.06□□□□□ -0.48
RDM1-225ENST00000619368 HLFQ16534 295 aa12.05□□□□□ -0.48
RDM1-225ENST00000619368 C7orf43Q8WVR3 580 aa12.05□□□□□ -0.48
RDM1-225ENST00000619368 NIP7Q9Y221 180 aaKnown RBP eCLIP12.05□□□□□ -0.48
RDM1-225ENST00000619368 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
RDM1-225ENST00000619368 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
RDM1-225ENST00000619368 DDNO94850 711 aaPredicted RBP12.04□□□□□ -0.48
RDM1-225ENST00000619368 SCN4AP35499 1836 aa12.04□□□□□ -0.48
RDM1-225ENST00000619368 KLRG2A4D1S0 409 aaPredicted RBP12.03□□□□□ -0.48
RDM1-225ENST00000619368 CAPN15O75808 1086 aa12.03□□□□□ -0.48
RDM1-225ENST00000619368 NPR1P16066 1061 aa12.03□□□□□ -0.48
RDM1-225ENST00000619368 SOGA3Q5TF21 947 aa12.03□□□□□ -0.48
RDM1-225ENST00000619368 OLFM4Q6UX06 510 aa12.03□□□□□ -0.48
RDM1-225ENST00000619368 TPTE2Q6XPS3 522 aa12.03□□□□□ -0.48
RDM1-225ENST00000619368 PLEKHF1Q96S99 279 aa12.03□□□□□ -0.48
RDM1-225ENST00000619368 RGL2O15211 777 aa12.02□□□□□ -0.49
RDM1-225ENST00000619368 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
RDM1-225ENST00000619368 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
RDM1-225ENST00000619368 COL13A1Q5TAT6 717 aaPredicted RBP12.02□□□□□ -0.49
RDM1-225ENST00000619368 NGEFQ8N5V2 710 aa12.02□□□□□ -0.49
RDM1-225ENST00000619368 THUMPD2Q9BTF0 503 aaKnown RBP12.02□□□□□ -0.49
RDM1-225ENST00000619368 CCDC93Q567U6 631 aa12.01□□□□□ -0.49
RDM1-225ENST00000619368 EIF4A1P60842 406 aaKnown RBP12□□□□□ -0.49
RDM1-225ENST00000619368 CHADLQ6NUI6 762 aa12□□□□□ -0.49
RDM1-225ENST00000619368 PNISRQ8TF01 805 aaKnown RBP12□□□□□ -0.49
RDM1-225ENST00000619368 ZNF277Q9NRM2 450 aaPredicted RBP12□□□□□ -0.49
RDM1-225ENST00000619368 NEFMP07197 916 aa11.99□□□□□ -0.49
RDM1-225ENST00000619368 GTF2E1P29083 439 aaPredicted RBP11.99□□□□□ -0.49
RDM1-225ENST00000619368 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
RDM1-225ENST00000619368 NFE2L2Q16236 605 aa11.99□□□□□ -0.49
RDM1-225ENST00000619368 TTLL7Q6ZT98 887 aa11.99□□□□□ -0.49
RDM1-225ENST00000619368 NUTM1Q86Y26 1132 aa11.99□□□□□ -0.49
RDM1-225ENST00000619368 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
RDM1-225ENST00000619368 ABCC12Q96J65 1359 aa11.99□□□□□ -0.49
RDM1-225ENST00000619368 MAP3K15Q6ZN16 1313 aa11.98□□□□□ -0.49
RDM1-225ENST00000619368 ZNF541Q9H0D2 1346 aa11.98□□□□□ -0.49
RDM1-225ENST00000619368 ERVV-1B6SEH8 477 aa11.98□□□□□ -0.49
RDM1-225ENST00000619368 MYL6BP14649 208 aa11.98□□□□□ -0.49
RDM1-225ENST00000619368 RTKN2Q8IZC4 609 aa11.98□□□□□ -0.49
RDM1-225ENST00000619368 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
RDM1-225ENST00000619368 SNED1Q8TER0 1413 aa11.97□□□□□ -0.49
RDM1-225ENST00000619368 GPTP24298 496 aa11.97□□□□□ -0.49
RDM1-225ENST00000619368 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
RDM1-225ENST00000619368 CRY2Q49AN0 593 aa11.97□□□□□ -0.49
RDM1-225ENST00000619368 SYNE4Q8N205 404 aa11.97□□□□□ -0.49
RDM1-225ENST00000619368 ZBTB3Q9H5J0 574 aa11.97□□□□□ -0.49
RDM1-225ENST00000619368 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
RDM1-225ENST00000619368 ADAMTSL1Q8N6G6 1762 aa11.97□□□□□ -0.49
RDM1-225ENST00000619368 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.49
RDM1-225ENST00000619368 IQCA1LA6NCM1 817 aa11.96□□□□□ -0.49
RDM1-225ENST00000619368 HSPA1AP0DMV8 641 aaKnown RBP11.96□□□□□ -0.49
RDM1-225ENST00000619368 HSPA1BP0DMV9 641 aaKnown RBP11.96□□□□□ -0.49
RDM1-225ENST00000619368 IARSP41252 1262 aaKnown RBP11.96□□□□□ -0.49
RDM1-225ENST00000619368 SUSD4Q5VX71 490 aa11.96□□□□□ -0.49
RDM1-225ENST00000619368 KIF6Q6ZMV9 814 aa11.96□□□□□ -0.49
RDM1-225ENST00000619368 NYXQ9GZU5 481 aa11.96□□□□□ -0.49
RDM1-225ENST00000619368 CREBZFQ9NS37 354 aa11.96□□□□□ -0.49
RDM1-225ENST00000619368 COL4A5P29400 1685 aa11.96□□□□□ -0.5
RDM1-225ENST00000619368 LAMB2P55268 1798 aa11.95□□□□□ -0.5
RDM1-225ENST00000619368 ANKRD36CQ5JPF3 1778 aa11.95□□□□□ -0.5
RDM1-225ENST00000619368 PASKQ96RG2 1323 aa11.95□□□□□ -0.5
RDM1-225ENST00000619368 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
RDM1-225ENST00000619368 FZD9O00144 591 aa11.95□□□□□ -0.5
RDM1-225ENST00000619368 HOXA10P31260 410 aaPredicted RBP11.95□□□□□ -0.5
RDM1-225ENST00000619368 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
RDM1-225ENST00000619368 LDHDQ86WU2 507 aa11.95□□□□□ -0.5
RDM1-225ENST00000619368 ZNF34Q8IZ26 560 aa11.95□□□□□ -0.5
RDM1-225ENST00000619368 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
RDM1-225ENST00000619368 TAF1P21675 1872 aa11.95□□□□□ -0.5
RDM1-225ENST00000619368 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms