RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 LRRC9Q6ZRR7 1453 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 SARNPP82979 210 aaKnown RBP13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 CWC25Q9NXE8 425 aaPredicted RBP13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 ATF3P18847 181 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 PPM1FP49593 454 aaPredicted RBP13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC114Q96M63 670 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 STIM2Q9P246 746 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 PSMC4P43686 418 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 MAP7D1Q3KQU3 841 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC40Q4G0X9 1142 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 LIMCH1Q9UPQ0 1083 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 BIN1O00499 593 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 RASSF4Q9H2L5 321 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE15A4D2H0 777 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE8P0CG41 777 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 ATP11AP98196 1134 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE6Q86UF2 777 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE4Q8IX94 777 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 SPTY2D1Q68D10 685 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 PNISRQ8TF01 805 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 VPS18Q9P253 973 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 TACC1O75410 805 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 CIB2O75838 187 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 ZNF165P49910 485 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 TPD52P55327 224 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 MRPS9P82933 396 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 A0A1B0GUL7 405 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE1Q96RT6 745 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 SAMD15Q9P1V8 674 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 AMPD3Q01432 767 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 DRC1Q96MC2 740 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 ANKRD30BQ9BXX2 1392 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 MYO1BO43795 1136 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 MYL6BP14649 208 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 GBP1P32455 592 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 EHMT1Q9H9B1 1298 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 STX6O43752 255 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 CUL5Q93034 780 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 B4GALNT4Q76KP1 1039 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 CEP120Q8N960 986 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC77Q9BR77 488 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 PRPHP41219 470 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 SELENOSQ9BQE4 189 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 FAM76AQ8TAV0 307 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 STMN2Q93045 179 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 RBM27Q9P2N5 1060 aaKnown RBP13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 EXOC1Q9NV70 894 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 TBC1D2Q9BYX2 928 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC194A0A1B0GVG4 234 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 TUBB4AP04350 444 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 SKILP12757 684 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 CPLX4Q7Z7G2 160 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 LRRC45Q96CN5 670 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 IFT74Q96LB3 600 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 NLRP6P59044 892 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 RMND1Q9NWS8 449 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CABP4P57796 275 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 NOLC1Q14978 699 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 TMEM57Q8N5G2 664 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 SYNCQ9H7C4 482 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 PUF60Q9UHX1 559 aaKnown RBP13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 UBASH3AP57075 661 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CCDC50Q8IVM0 306 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 BUB1BO60566 1050 aaPredicted RBP13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CLCN1P35523 988 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 C10orf67Q8IYJ2 551 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CEP126Q9P2H0 1117 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 ZEB2O60315 1214 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 KRT13P13646 458 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms