RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 LRRC9Q6ZRR7 1453 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 SARNPP82979 210 aaKnown RBP13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 CWC25Q9NXE8 425 aaPredicted RBP13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 ATF3P18847 181 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 PPM1FP49593 454 aaPredicted RBP13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC114Q96M63 670 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 STIM2Q9P246 746 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 PSMC4P43686 418 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 MAP7D1Q3KQU3 841 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC40Q4G0X9 1142 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 LIMCH1Q9UPQ0 1083 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 BIN1O00499 593 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 RASSF4Q9H2L5 321 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE15A4D2H0 777 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE8P0CG41 777 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 ATP11AP98196 1134 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE6Q86UF2 777 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE4Q8IX94 777 aa13.18□□□□□ -0.3
PCDHA4-204ENST00000618834 SPTY2D1Q68D10 685 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 PNISRQ8TF01 805 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 VPS18Q9P253 973 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 TACC1O75410 805 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 CIB2O75838 187 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 ZNF165P49910 485 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 TPD52P55327 224 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 MRPS9P82933 396 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 A0A1B0GUL7 405 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 CTAGE1Q96RT6 745 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 SAMD15Q9P1V8 674 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 AMPD3Q01432 767 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 DRC1Q96MC2 740 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 ANKRD30BQ9BXX2 1392 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 MYO1BO43795 1136 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 MYL6BP14649 208 aa13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-204ENST00000618834 GBP1P32455 592 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 EHMT1Q9H9B1 1298 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 STX6O43752 255 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 CUL5Q93034 780 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 B4GALNT4Q76KP1 1039 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 CEP120Q8N960 986 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC77Q9BR77 488 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 PRPHP41219 470 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 SELENOSQ9BQE4 189 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 FAM76AQ8TAV0 307 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 STMN2Q93045 179 aa13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 RBM27Q9P2N5 1060 aaKnown RBP13.16□□□□□ -0.3
PCDHA4-204ENST00000618834 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 EXOC1Q9NV70 894 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 TBC1D2Q9BYX2 928 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
PCDHA4-204ENST00000618834 CCDC194A0A1B0GVG4 234 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 TUBB4AP04350 444 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 SKILP12757 684 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 CPLX4Q7Z7G2 160 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 LRRC45Q96CN5 670 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 IFT74Q96LB3 600 aa13.15□□□□□ -0.31
PCDHA4-204ENST00000618834 NLRP6P59044 892 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 RMND1Q9NWS8 449 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CABP4P57796 275 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 NOLC1Q14978 699 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 TMEM57Q8N5G2 664 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 SYNCQ9H7C4 482 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 PUF60Q9UHX1 559 aaKnown RBP13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 UBASH3AP57075 661 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CCDC50Q8IVM0 306 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 BUB1BO60566 1050 aaPredicted RBP13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CLCN1P35523 988 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 C10orf67Q8IYJ2 551 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 CEP126Q9P2H0 1117 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 ZEB2O60315 1214 aa13.14□□□□□ -0.31
PCDHA4-204ENST00000618834 KRT13P13646 458 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms