RNA–Protein interactions for RNA: ENST00000617962.1

GADD45A-205, Transcript of growth arrest and DNA damage inducible alpha, human

TSL 1 (best) BASIC

Gene GADD45A, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GADD45A-205	ENST00000617962	CNKSR1	Q969H4	720 aa		32.8	■■■□□ 2.84
GADD45A-205	ENST00000617962	DICER1	Q9UPY3	1922 aa	Known RBP	32.79	■■■□□ 2.84
GADD45A-205	ENST00000617962	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.79	■■■□□ 2.84
GADD45A-205	ENST00000617962	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.79	■■■□□ 2.84
GADD45A-205	ENST00000617962	STYK1	Q6J9G0	422 aa		32.79	■■■□□ 2.84
GADD45A-205	ENST00000617962	MCM10	Q7L590	875 aa		32.79	■■■□□ 2.84
GADD45A-205	ENST00000617962	RTF1	Q92541	710 aa	Known RBP	32.79	■■■□□ 2.84
GADD45A-205	ENST00000617962	SRGN	P10124	158 aa		32.78	■■■□□ 2.84
GADD45A-205	ENST00000617962	TAOK3	Q9H2K8	898 aa		32.78	■■■□□ 2.84
GADD45A-205	ENST00000617962	SLX4	Q8IY92	1834 aa		32.78	■■■□□ 2.84
GADD45A-205	ENST00000617962	PCNT	O95613	3336 aa		32.78	■■■□□ 2.84
GADD45A-205	ENST00000617962	CACNA1S	Q13698	1873 aa		32.78	■■■□□ 2.84
GADD45A-205	ENST00000617962	LTBP3	Q9NS15	1303 aa		32.77	■■■□□ 2.84
GADD45A-205	ENST00000617962	PRPF40B	Q6NWY9	871 aa	Known RBP	32.77	■■■□□ 2.84
GADD45A-205	ENST00000617962	SNRPA1	P09661	255 aa	Known RBP	32.76	■■■□□ 2.83
GADD45A-205	ENST00000617962	MASTL	Q96GX5	879 aa		32.76	■■■□□ 2.83
GADD45A-205	ENST00000617962	PPP2R1A	P30153	589 aa		32.75	■■■□□ 2.83
GADD45A-205	ENST00000617962	DCTN1	Q14203	1278 aa		32.74	■■■□□ 2.83
GADD45A-205	ENST00000617962	CLEC4G	Q6UXB4	293 aa		32.74	■■■□□ 2.83
GADD45A-205	ENST00000617962	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.74	■■■□□ 2.83
GADD45A-205	ENST00000617962	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.73	■■■□□ 2.83
GADD45A-205	ENST00000617962	ZNF652	Q9Y2D9	606 aa		32.73	■■■□□ 2.83
GADD45A-205	ENST00000617962	ARFGEF2	Q9Y6D5	1785 aa		32.73	■■■□□ 2.83
GADD45A-205	ENST00000617962	SOGA3	Q5TF21	947 aa		32.72	■■■□□ 2.83
GADD45A-205	ENST00000617962	NBPF26	B4DH59	902 aa		32.69	■■■□□ 2.82
GADD45A-205	ENST00000617962	DDN	O94850	711 aa	Predicted RBP	32.69	■■■□□ 2.82
GADD45A-205	ENST00000617962	NBPF10	Q6P3W6	841 aa	Known RBP	32.69	■■■□□ 2.82
GADD45A-205	ENST00000617962	NBPF15	Q8N660	670 aa		32.69	■■■□□ 2.82
GADD45A-205	ENST00000617962	HTATSF1	O43719	755 aa	Known RBP	32.67	■■■□□ 2.82
GADD45A-205	ENST00000617962	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.67	■■■□□ 2.82
GADD45A-205	ENST00000617962	NPR1	P16066	1061 aa		32.66	■■■□□ 2.82
GADD45A-205	ENST00000617962	C7orf43	Q8WVR3	580 aa		32.66	■■■□□ 2.82
GADD45A-205	ENST00000617962	TPTE2	Q6XPS3	522 aa		32.65	■■■□□ 2.82
GADD45A-205	ENST00000617962	FAM177B	A6PVY3	158 aa		32.64	■■■□□ 2.82
GADD45A-205	ENST00000617962	TAF7	Q15545	349 aa	Predicted RBP	32.64	■■■□□ 2.82
GADD45A-205	ENST00000617962	CCDC93	Q567U6	631 aa		32.64	■■■□□ 2.82
GADD45A-205	ENST00000617962	CHADL	Q6NUI6	762 aa		32.64	■■■□□ 2.82
GADD45A-205	ENST00000617962	KLRG2	A4D1S0	409 aa	Predicted RBP	32.63	■■■□□ 2.81
GADD45A-205	ENST00000617962	POTEI	P0CG38	1075 aa		32.63	■■■□□ 2.81
GADD45A-205	ENST00000617962	POTEJ	P0CG39	1038 aa		32.63	■■■□□ 2.81
GADD45A-205	ENST00000617962	MIS18A	Q9NYP9	233 aa		32.63	■■■□□ 2.81
GADD45A-205	ENST00000617962	RGL2	O15211	777 aa		32.62	■■■□□ 2.81
GADD45A-205	ENST00000617962	HLF	Q16534	295 aa		32.61	■■■□□ 2.81
GADD45A-205	ENST00000617962	HSPA1A	P0DMV8	641 aa	Known RBP	32.6	■■■□□ 2.81
GADD45A-205	ENST00000617962	HSPA1B	P0DMV9	641 aa	Known RBP	32.6	■■■□□ 2.81
GADD45A-205	ENST00000617962	OLFM4	Q6UX06	510 aa		32.59	■■■□□ 2.81
GADD45A-205	ENST00000617962	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.58	■■■□□ 2.81
GADD45A-205	ENST00000617962	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.58	■■■□□ 2.81
GADD45A-205	ENST00000617962	LAMB4	A4D0S4	1761 aa		32.58	■■■□□ 2.81
GADD45A-205	ENST00000617962	TNS4	Q8IZW8	715 aa		32.57	■■■□□ 2.8
GADD45A-205	ENST00000617962	IQCA1L	A6NCM1	817 aa		32.56	■■■□□ 2.8
GADD45A-205	ENST00000617962	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.56	■■■□□ 2.8
GADD45A-205	ENST00000617962	CREBZF	Q9NS37	354 aa		32.56	■■■□□ 2.8
GADD45A-205	ENST00000617962	GTF2E1	P29083	439 aa	Predicted RBP	32.55	■■■□□ 2.8
GADD45A-205	ENST00000617962	NGEF	Q8N5V2	710 aa		32.55	■■■□□ 2.8
GADD45A-205	ENST00000617962	NEFM	P07197	916 aa		32.54	■■■□□ 2.8
GADD45A-205	ENST00000617962	RTKN2	Q8IZC4	609 aa		32.54	■■■□□ 2.8
GADD45A-205	ENST00000617962	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.54	■■■□□ 2.8
GADD45A-205	ENST00000617962	SCN4A	P35499	1836 aa		32.54	■■■□□ 2.8
GADD45A-205	ENST00000617962	ZNF541	Q9H0D2	1346 aa		32.53	■■■□□ 2.8
GADD45A-205	ENST00000617962	DLG5	Q8TDM6	1919 aa		32.53	■■■□□ 2.8
GADD45A-205	ENST00000617962	MKRN1	Q9UHC7	482 aa	Known RBP	32.53	■■■□□ 2.8
GADD45A-205	ENST00000617962	CAPN15	O75808	1086 aa		32.52	■■■□□ 2.8
GADD45A-205	ENST00000617962	ALDH1B1	P30837	517 aa		32.52	■■■□□ 2.8
GADD45A-205	ENST00000617962	LDHD	Q86WU2	507 aa		32.52	■■■□□ 2.8
GADD45A-205	ENST00000617962	PNISR	Q8TF01	805 aa	Known RBP	32.52	■■■□□ 2.8
GADD45A-205	ENST00000617962	KDM3B	Q7LBC6	1761 aa		32.52	■■■□□ 2.8
GADD45A-205	ENST00000617962	ABCC12	Q96J65	1359 aa		32.49	■■■□□ 2.79
GADD45A-205	ENST00000617962	ERVV-1	B6SEH8	477 aa		32.49	■■■□□ 2.79
GADD45A-205	ENST00000617962	NUTM1	Q86Y26	1132 aa		32.49	■■■□□ 2.79
GADD45A-205	ENST00000617962	SYNE4	Q8N205	404 aa		32.49	■■■□□ 2.79
GADD45A-205	ENST00000617962	NYX	Q9GZU5	481 aa		32.49	■■■□□ 2.79
GADD45A-205	ENST00000617962	RRP7A	Q9Y3A4	280 aa	Known RBP	32.49	■■■□□ 2.79
GADD45A-205	ENST00000617962	EIF4A1	P60842	406 aa	Known RBP	32.48	■■■□□ 2.79
GADD45A-205	ENST00000617962	MAP3K15	Q6ZN16	1313 aa		32.48	■■■□□ 2.79
GADD45A-205	ENST00000617962	PASK	Q96RG2	1323 aa		32.48	■■■□□ 2.79
GADD45A-205	ENST00000617962	NUP98	P52948	1817 aa		32.47	■■■□□ 2.79
GADD45A-205	ENST00000617962	IARS	P41252	1262 aa	Known RBP	32.47	■■■□□ 2.79
GADD45A-205	ENST00000617962	EAPP	Q56P03	285 aa	Predicted RBP	32.47	■■■□□ 2.79
GADD45A-205	ENST00000617962	TTLL7	Q6ZT98	887 aa		32.47	■■■□□ 2.79
GADD45A-205	ENST00000617962	PLEKHF1	Q96S99	279 aa		32.47	■■■□□ 2.79
GADD45A-205	ENST00000617962	THUMPD2	Q9BTF0	503 aa	Known RBP	32.47	■■■□□ 2.79
GADD45A-205	ENST00000617962	CRY2	Q49AN0	593 aa		32.46	■■■□□ 2.79
GADD45A-205	ENST00000617962	KIF6	Q6ZMV9	814 aa		32.46	■■■□□ 2.79
GADD45A-205	ENST00000617962	HACL1	Q9UJ83	578 aa		32.46	■■■□□ 2.79
GADD45A-205	ENST00000617962	MYL6B	P14649	208 aa		32.45	■■■□□ 2.79
GADD45A-205	ENST00000617962	NFE2L2	Q16236	605 aa		32.45	■■■□□ 2.79
GADD45A-205	ENST00000617962	FZD9	O00144	591 aa		32.44	■■■□□ 2.78
GADD45A-205	ENST00000617962	GPT	P24298	496 aa		32.44	■■■□□ 2.78
GADD45A-205	ENST00000617962	ZBTB3	Q9H5J0	574 aa		32.43	■■■□□ 2.78
GADD45A-205	ENST00000617962	CLEC11A	Q9Y240	323 aa		32.43	■■■□□ 2.78
GADD45A-205	ENST00000617962	CNTNAP1	P78357	1384 aa		32.43	■■■□□ 2.78
GADD45A-205	ENST00000617962	SNED1	Q8TER0	1413 aa		32.43	■■■□□ 2.78
GADD45A-205	ENST00000617962	EPHX2	P34913	555 aa		32.42	■■■□□ 2.78
GADD45A-205	ENST00000617962	PSMD1	Q99460	953 aa		32.42	■■■□□ 2.78
GADD45A-205	ENST00000617962	RNF123	Q5XPI4	1314 aa		32.42	■■■□□ 2.78
GADD45A-205	ENST00000617962	ITGBL1	O95965	494 aa	Predicted RBP	32.41	■■■□□ 2.78
GADD45A-205	ENST00000617962	RPGR	Q92834	1020 aa	Known RBP	32.41	■■■□□ 2.78
GADD45A-205	ENST00000617962	UBN2	Q6ZU65	1347 aa		32.41	■■■□□ 2.78
GADD45A-205	ENST00000617962	JDP2	Q8WYK2	163 aa		32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms