RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 INTS3Q68E01 1043 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-210ENST00000617904 GIGYF1O75420 1035 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-210ENST00000617904 DDX58O95786 925 aaKnown RBP21.11■□□□□ 0.97
TRAPPC3-210ENST00000617904 SSFA2P28290 1259 aa21.11■□□□□ 0.97
TRAPPC3-210ENST00000617904 FLIIQ13045 1269 aa21.11■□□□□ 0.97
TRAPPC3-210ENST00000617904 ATG3Q9NT62 314 aa21.11■□□□□ 0.97
TRAPPC3-210ENST00000617904 HYPKQ9NX55 129 aa21.11■□□□□ 0.97
TRAPPC3-210ENST00000617904 TNNQ9UQP3 1299 aa21.1■□□□□ 0.97
TRAPPC3-210ENST00000617904 HEG1Q9ULI3 1381 aa21.09■□□□□ 0.97
TRAPPC3-210ENST00000617904 ATP6V1AP38606 617 aa21.09■□□□□ 0.97
TRAPPC3-210ENST00000617904 C1QTNF8P60827 252 aa21.09■□□□□ 0.97
TRAPPC3-210ENST00000617904 NECTIN2Q92692 538 aa21.09■□□□□ 0.97
TRAPPC3-210ENST00000617904 HDAC5Q9UQL6 1122 aa21.09■□□□□ 0.97
TRAPPC3-210ENST00000617904 ZBTB40Q9NUA8 1239 aa21.07■□□□□ 0.96
TRAPPC3-210ENST00000617904 PXDNLA1KZ92 1463 aa21.07■□□□□ 0.96
TRAPPC3-210ENST00000617904 GOLGB1Q14789 3259 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-210ENST00000617904 ERBB4Q15303 1308 aa21.07■□□□□ 0.96
TRAPPC3-210ENST00000617904 GNPATO15228 680 aa21.06■□□□□ 0.96
TRAPPC3-210ENST00000617904 KCNQ3O43525 872 aa21.06■□□□□ 0.96
TRAPPC3-210ENST00000617904 SLC4A10Q6U841 1118 aa21.06■□□□□ 0.96
TRAPPC3-210ENST00000617904 SLC4A9Q96Q91 983 aa21.06■□□□□ 0.96
TRAPPC3-210ENST00000617904 TEX13AQ9BXU3 409 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC3-210ENST00000617904 KDM2BQ8NHM5 1336 aa21.06■□□□□ 0.96
TRAPPC3-210ENST00000617904 ZBTB7BO15156 539 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC3-210ENST00000617904 DDX21Q9NR30 783 aaKnown RBP eCLIP21.05■□□□□ 0.96
TRAPPC3-210ENST00000617904 GNAI3P08754 354 aa21.04■□□□□ 0.96
TRAPPC3-210ENST00000617904 SLC39A6Q13433 755 aa21.04■□□□□ 0.96
TRAPPC3-210ENST00000617904 HDAC1Q13547 482 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-210ENST00000617904 CHPF2Q9P2E5 772 aa21.04■□□□□ 0.96
TRAPPC3-210ENST00000617904 ZNF496Q96IT1 587 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-210ENST00000617904 ZNF831Q5JPB2 1677 aa21.02■□□□□ 0.96
TRAPPC3-210ENST00000617904 RBM42Q9BTD8 480 aaKnown RBP21.02■□□□□ 0.95
TRAPPC3-210ENST00000617904 ZBTB47Q9UFB7 747 aaPredicted RBP21.02■□□□□ 0.95
TRAPPC3-210ENST00000617904 HMMRO75330 724 aa21.01■□□□□ 0.95
TRAPPC3-210ENST00000617904 G2E3Q7L622 706 aa21.01■□□□□ 0.95
TRAPPC3-210ENST00000617904 RPAP2Q8IXW5 612 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC3-210ENST00000617904 VSIG10Q8N0Z9 540 aa21.01■□□□□ 0.95
TRAPPC3-210ENST00000617904 SRCIN1Q9C0H9 1055 aa21.01■□□□□ 0.95
TRAPPC3-210ENST00000617904 NEXNQ0ZGT2 675 aa21■□□□□ 0.95
TRAPPC3-210ENST00000617904 RC3H1Q5TC82 1133 aaKnown RBP21■□□□□ 0.95
TRAPPC3-210ENST00000617904 DNAAF4Q8WXU2 420 aa21■□□□□ 0.95
TRAPPC3-210ENST00000617904 PCDHB15Q9Y5E8 787 aa21■□□□□ 0.95
TRAPPC3-210ENST00000617904 GCC1Q96CN9 775 aa20.99■□□□□ 0.95
TRAPPC3-210ENST00000617904 RTCBQ9Y3I0 505 aaKnown RBP20.99■□□□□ 0.95
TRAPPC3-210ENST00000617904 COL5A3P25940 1745 aaPredicted RBP20.98■□□□□ 0.95
TRAPPC3-210ENST00000617904 MMP10P09238 476 aa20.98■□□□□ 0.95
TRAPPC3-210ENST00000617904 TRAPPC3LQ5T215 181 aa20.98■□□□□ 0.95
TRAPPC3-210ENST00000617904 KSR2Q6VAB6 950 aa20.98■□□□□ 0.95
TRAPPC3-210ENST00000617904 PHAXQ9H814 394 aaKnown RBP20.98■□□□□ 0.95
TRAPPC3-210ENST00000617904 WWC3Q9ULE0 1092 aa20.98■□□□□ 0.95
TRAPPC3-210ENST00000617904 ATP10DQ9P241 1426 aa20.97■□□□□ 0.95
TRAPPC3-210ENST00000617904 CNTNAP4Q9C0A0 1308 aa20.97■□□□□ 0.95
TRAPPC3-210ENST00000617904 GNAI2P04899 355 aa20.97■□□□□ 0.95
TRAPPC3-210ENST00000617904 ARHGEF1Q92888 912 aaKnown RBP20.97■□□□□ 0.95
TRAPPC3-210ENST00000617904 ADCY9O60503 1353 aa20.96■□□□□ 0.95
TRAPPC3-210ENST00000617904 F6X3S4 739 aa20.96■□□□□ 0.95
TRAPPC3-210ENST00000617904 RPS6KA4O75676 772 aa20.96■□□□□ 0.95
TRAPPC3-210ENST00000617904 ALDH1L1O75891 902 aa20.96■□□□□ 0.95
TRAPPC3-210ENST00000617904 STARD3NLO95772 234 aa20.96■□□□□ 0.95
TRAPPC3-210ENST00000617904 IGHDP01880 384 aa20.96■□□□□ 0.95
TRAPPC3-210ENST00000617904 RIC3Q7Z5B4 369 aa20.96■□□□□ 0.95
TRAPPC3-210ENST00000617904 NPM2Q86SE8 214 aaKnown RBP20.96■□□□□ 0.95
TRAPPC3-210ENST00000617904 LAMB4A4D0S4 1761 aa20.96■□□□□ 0.95
TRAPPC3-210ENST00000617904 ADRA2BP18089 450 aa20.95■□□□□ 0.94
TRAPPC3-210ENST00000617904 NLGN1Q8N2Q7 840 aa20.95■□□□□ 0.94
TRAPPC3-210ENST00000617904 MYH14Q7Z406 1995 aaKnown RBP20.95■□□□□ 0.94
TRAPPC3-210ENST00000617904 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
TRAPPC3-210ENST00000617904 PI4KAP2A4QPH2 592 aa20.94■□□□□ 0.94
TRAPPC3-210ENST00000617904 PTCD1O75127 700 aaKnown RBP20.94■□□□□ 0.94
TRAPPC3-210ENST00000617904 UBTFL1P0CB47 393 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC3-210ENST00000617904 PI4KAP1Q8N8J0 262 aa20.94■□□□□ 0.94
TRAPPC3-210ENST00000617904 UBR2Q8IWV8 1755 aa20.93■□□□□ 0.94
TRAPPC3-210ENST00000617904 GYS1P13807 737 aa20.93■□□□□ 0.94
TRAPPC3-210ENST00000617904 MYL6BP14649 208 aa20.93■□□□□ 0.94
TRAPPC3-210ENST00000617904 KIAA1551Q9HCM1 1747 aa20.92■□□□□ 0.94
TRAPPC3-210ENST00000617904 CICQ96RK0 1608 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC3-210ENST00000617904 MAP3K2Q9Y2U5 619 aa20.92■□□□□ 0.94
TRAPPC3-210ENST00000617904 USP16Q9Y5T5 823 aa20.92■□□□□ 0.94
TRAPPC3-210ENST00000617904 RFC4P35249 363 aa20.91■□□□□ 0.94
TRAPPC3-210ENST00000617904 AIMP1Q12904 312 aaKnown RBP20.91■□□□□ 0.94
TRAPPC3-210ENST00000617904 ANKRD44Q8N8A2 993 aa20.91■□□□□ 0.94
TRAPPC3-210ENST00000617904 LINS1Q8NG48 757 aa20.91■□□□□ 0.94
TRAPPC3-210ENST00000617904 N4BP2Q86UW6 1770 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC3-210ENST00000617904 KCPQ6ZWJ8 1503 aa20.9■□□□□ 0.94
TRAPPC3-210ENST00000617904 TGFB2P61812 414 aa20.9■□□□□ 0.94
TRAPPC3-210ENST00000617904 SMC5Q8IY18 1101 aa20.9■□□□□ 0.94
TRAPPC3-210ENST00000617904 C9orf78Q9NZ63 289 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC3-210ENST00000617904 C4AP0C0L4 1744 aa20.9■□□□□ 0.94
TRAPPC3-210ENST00000617904 C10orf71Q711Q0 1435 aa20.9■□□□□ 0.94
TRAPPC3-210ENST00000617904 PRAMEF22A3QJZ6 481 aa20.89■□□□□ 0.93
TRAPPC3-210ENST00000617904 CRKLP46109 303 aaKnown RBP20.89■□□□□ 0.93
TRAPPC3-210ENST00000617904 ANKRD13DQ6ZTN6 518 aa20.89■□□□□ 0.93
TRAPPC3-210ENST00000617904 COPS6Q7L5N1 327 aa20.89■□□□□ 0.93
TRAPPC3-210ENST00000617904 MEIS3Q99687 375 aa20.89■□□□□ 0.93
TRAPPC3-210ENST00000617904 GPBP1L1Q9HC44 474 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC3-210ENST00000617904 TJP1Q07157 1748 aa20.89■□□□□ 0.93
TRAPPC3-210ENST00000617904 IBTKQ9P2D0 1353 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC3-210ENST00000617904 ANXA1P04083 346 aa20.88■□□□□ 0.93
TRAPPC3-210ENST00000617904 PDIA6Q15084 440 aa20.88■□□□□ 0.93
TRAPPC3-210ENST00000617904 BEND3Q5T5X7 828 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms