RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 SRGNP10124 158 aa12.7□□□□□ -0.38
TARDBP-218ENST00000617172 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
TARDBP-218ENST00000617172 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
TARDBP-218ENST00000617172 RUNDC1Q96C34 613 aa12.7□□□□□ -0.38
TARDBP-218ENST00000617172 MASTLQ96GX5 879 aa12.7□□□□□ -0.38
TARDBP-218ENST00000617172 KIF6Q6ZMV9 814 aa12.69□□□□□ -0.38
TARDBP-218ENST00000617172 CCDC24Q8N4L8 307 aa12.69□□□□□ -0.38
TARDBP-218ENST00000617172 PRKRIP1Q9H875 184 aaPredicted RBP12.69□□□□□ -0.38
TARDBP-218ENST00000617172 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
TARDBP-218ENST00000617172 BRCA1P38398 1863 aaKnown RBP12.68□□□□□ -0.38
TARDBP-218ENST00000617172 ARFGEF1Q9Y6D6 1849 aa12.68□□□□□ -0.38
TARDBP-218ENST00000617172 KLRG2A4D1S0 409 aaPredicted RBP12.68□□□□□ -0.38
TARDBP-218ENST00000617172 HSPA6P17066 643 aa12.68□□□□□ -0.38
TARDBP-218ENST00000617172 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
TARDBP-218ENST00000617172 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
TARDBP-218ENST00000617172 C16orf71Q8IYS4 520 aaPredicted RBP12.68□□□□□ -0.38
TARDBP-218ENST00000617172 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
TARDBP-218ENST00000617172 MAP3K15Q6ZN16 1313 aa12.67□□□□□ -0.38
TARDBP-218ENST00000617172 C21orf2O43822 256 aa12.67□□□□□ -0.38
TARDBP-218ENST00000617172 NPR1P16066 1061 aa12.67□□□□□ -0.38
TARDBP-218ENST00000617172 HLFQ16534 295 aa12.67□□□□□ -0.38
TARDBP-218ENST00000617172 NGEFQ8N5V2 710 aa12.67□□□□□ -0.38
TARDBP-218ENST00000617172 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
TARDBP-218ENST00000617172 ADAMTS8Q9UP79 889 aa12.67□□□□□ -0.38
TARDBP-218ENST00000617172 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
TARDBP-218ENST00000617172 AFDNP55196 1824 aaKnown RBP12.67□□□□□ -0.38
TARDBP-218ENST00000617172 CHL1O00533 1208 aa12.66□□□□□ -0.38
TARDBP-218ENST00000617172 MYL6BP14649 208 aa12.66□□□□□ -0.38
TARDBP-218ENST00000617172 ALDH1B1P30837 517 aa12.66□□□□□ -0.38
TARDBP-218ENST00000617172 RASSF7Q02833 373 aa12.66□□□□□ -0.38
TARDBP-218ENST00000617172 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
TARDBP-218ENST00000617172 DPY19L2Q6NUT2 758 aa12.66□□□□□ -0.38
TARDBP-218ENST00000617172 PRPF40BQ6NWY9 871 aaKnown RBP12.66□□□□□ -0.38
TARDBP-218ENST00000617172 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
TARDBP-218ENST00000617172 LTBP3Q9NS15 1303 aa12.65□□□□□ -0.38
TARDBP-218ENST00000617172 GLTPD2A6NH11 291 aa12.65□□□□□ -0.38
TARDBP-218ENST00000617172 NFKBIEO00221 500 aa12.65□□□□□ -0.38
TARDBP-218ENST00000617172 EIF2S2P20042 333 aaKnown RBP12.65□□□□□ -0.38
TARDBP-218ENST00000617172 TTLL7Q6ZT98 887 aa12.65□□□□□ -0.38
TARDBP-218ENST00000617172 CCDC146Q8IYE0 955 aa12.65□□□□□ -0.38
TARDBP-218ENST00000617172 FAM177BA6PVY3 158 aa12.64□□□□□ -0.39
TARDBP-218ENST00000617172 VEGFAP15692 232 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-218ENST00000617172 FSTL1Q12841 308 aa12.64□□□□□ -0.39
TARDBP-218ENST00000617172 ERFEQ4G0M1 354 aa12.64□□□□□ -0.39
TARDBP-218ENST00000617172 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
TARDBP-218ENST00000617172 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
TARDBP-218ENST00000617172 RRAGCQ9HB90 399 aa12.64□□□□□ -0.39
TARDBP-218ENST00000617172 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-218ENST00000617172 APLP1P51693 650 aa12.63□□□□□ -0.39
TARDBP-218ENST00000617172 PRELPP51888 382 aa12.63□□□□□ -0.39
TARDBP-218ENST00000617172 PARP10Q53GL7 1025 aa12.63□□□□□ -0.39
TARDBP-218ENST00000617172 PPP1R42Q7Z4L9 355 aa12.63□□□□□ -0.39
TARDBP-218ENST00000617172 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
TARDBP-218ENST00000617172 RTKN2Q8IZC4 609 aa12.63□□□□□ -0.39
TARDBP-218ENST00000617172 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
TARDBP-218ENST00000617172 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
TARDBP-218ENST00000617172 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
TARDBP-218ENST00000617172 CEP350Q5VT06 3117 aa12.62□□□□□ -0.39
TARDBP-218ENST00000617172 HOXB7P09629 217 aa12.62□□□□□ -0.39
TARDBP-218ENST00000617172 CALD1Q05682 793 aaKnown RBP12.62□□□□□ -0.39
TARDBP-218ENST00000617172 PDIA6Q15084 440 aa12.62□□□□□ -0.39
TARDBP-218ENST00000617172 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
TARDBP-218ENST00000617172 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
TARDBP-218ENST00000617172 LAS1LQ9Y4W2 734 aaKnown RBP12.62□□□□□ -0.39
TARDBP-218ENST00000617172 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 DLG5Q8TDM6 1919 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 IBTKQ9P2D0 1353 aaPredicted RBP12.61□□□□□ -0.39
TARDBP-218ENST00000617172 GPTP24298 496 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 CRY2Q49AN0 593 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 HSP90AB3PQ58FF7 597 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 SUSD4Q5VX71 490 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 LRP10Q7Z4F1 713 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 DDX21Q9NR30 783 aaKnown RBP eCLIP12.61□□□□□ -0.39
TARDBP-218ENST00000617172 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
TARDBP-218ENST00000617172 COPS6Q7L5N1 327 aa12.6□□□□□ -0.39
TARDBP-218ENST00000617172 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
TARDBP-218ENST00000617172 SMC1BQ8NDV3 1235 aa12.6□□□□□ -0.39
TARDBP-218ENST00000617172 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
TARDBP-218ENST00000617172 CHMP4AQ9BY43 222 aa12.6□□□□□ -0.39
TARDBP-218ENST00000617172 RNF123Q5XPI4 1314 aa12.6□□□□□ -0.39
TARDBP-218ENST00000617172 HOXA10P31260 410 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-218ENST00000617172 FKBP4Q02790 459 aaKnown RBP eCLIP12.59□□□□□ -0.39
TARDBP-218ENST00000617172 SLC10A5Q5PT55 438 aa12.59□□□□□ -0.39
TARDBP-218ENST00000617172 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
TARDBP-218ENST00000617172 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
TARDBP-218ENST00000617172 UTP14AQ9BVJ6 771 aaKnown RBP12.59□□□□□ -0.39
TARDBP-218ENST00000617172 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-218ENST00000617172 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
TARDBP-218ENST00000617172 UBN2Q6ZU65 1347 aa12.59□□□□□ -0.39
TARDBP-218ENST00000617172 LAMB4A4D0S4 1761 aa12.58□□□□□ -0.39
TARDBP-218ENST00000617172 APAF1O14727 1248 aa12.58□□□□□ -0.4
TARDBP-218ENST00000617172 NTSR2O95665 410 aa12.58□□□□□ -0.4
TARDBP-218ENST00000617172 GNAI1P63096 354 aa12.58□□□□□ -0.4
TARDBP-218ENST00000617172 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.4
TARDBP-218ENST00000617172 PROSER3Q2NL68 480 aa12.58□□□□□ -0.4
TARDBP-218ENST00000617172 RIC1Q4ADV7 1423 aa12.58□□□□□ -0.4
TARDBP-218ENST00000617172 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms