RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 PPFIA3O75145 1194 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 HMGN5P82970 282 aaKnown RBP6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 STAP2Q9UGK3 403 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 DHX16O60231 1041 aaKnown RBP6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 STK38Q15208 465 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 BEND3Q5T5X7 828 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 LMBRD1Q9NUN5 540 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 IFIT1P09914 478 aaKnown RBP6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 ZSCAN22P10073 491 aaPredicted RBP6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 HSPA4P34932 840 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 U3KPZ7 1027 aaPredicted RBP6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 LETM1O95202 739 aaPredicted RBP6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 ARHGEF25Q86VW2 580 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 TNMDQ9H2S6 317 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 USP6P35125 1406 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 MYO5CQ9NQX4 1742 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 CCDC171Q6TFL3 1326 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 GOLIM4O00461 696 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 UBE2HP62256 183 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 CKAP2LQ8IYA6 745 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 VSIG10Q8N0Z9 540 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 CTNNA3Q9UI47 895 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 CFAP45Q9UL16 551 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 A2ML1A8K2U0 1454 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 MAP3K11Q16584 847 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 FILIP1Q7Z7B0 1213 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 KIF2CQ99661 725 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 TMEM63CQ9P1W3 806 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 RNF17Q9BXT8 1623 aaKnown RBP6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 ATP7BP35670 1465 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 IDH1O75874 414 aaKnown RBP6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 GJB2P29033 226 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 LRSAM1Q6UWE0 723 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 TBC1D2BQ9UPU7 963 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 CLTCL1P53675 1640 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 MADDQ8WXG6 1647 aa6.67□□□□□ -1.34
SYNCRIP-204ENST00000616122 KAT6BQ8WYB5 2073 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 CCDC183Q5T5S1 534 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 DCAF5Q96JK2 942 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 EPB41L2O43491 1005 aaKnown RBP6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 TIMM10P62072 90 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 DNM1Q05193 864 aaKnown RBP6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 LDHAL6AQ6ZMR3 332 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 USP48Q86UV5 1035 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 SPC24Q8NBT2 197 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 FBXW7Q969H0 707 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 DBNDD2Q9BQY9 259 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 CNNM1Q9NRU3 951 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 ZNF165P49910 485 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 NEK1Q96PY6 1258 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 LRRC2Q9BYS8 371 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 ZNF445P59923 1031 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 GIMAP6Q6P9H5 292 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 EDC3Q96F86 508 aaKnown RBP6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 GCKRQ14397 625 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 PROSER3Q2NL68 480 aa6.66□□□□□ -1.34
SYNCRIP-204ENST00000616122 TRIM29Q14134 588 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 NFXL1Q6ZNB6 911 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 RBSNQ9H1K0 784 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 ZKSCAN5Q9Y2L8 839 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 ARHGEF40Q8TER5 1519 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 PTCH1Q13635 1447 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 F13A1P00488 732 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 CAMK4Q16566 473 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 HMG20BQ9P0W2 317 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 CNPY2Q9Y2B0 182 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 LMTK2Q8IWU2 1503 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 AKAP17AQ02040 695 aaKnown RBP6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 NMIQ13287 307 aaPredicted RBP6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 IFIT5Q13325 482 aaKnown RBP6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 FAM227BQ96M60 508 aa6.65□□□□□ -1.34
SYNCRIP-204ENST00000616122 GPTP24298 496 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 TPM4P67936 248 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 SAFBQ15424 915 aaKnown RBP eCLIP6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 DACT1Q9NYF0 836 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 SNX14Q9Y5W7 946 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 IBTKQ9P2D0 1353 aaPredicted RBP6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 TET3O43151 1660 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 HSPA2P54652 639 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 CUL4AQ13619 759 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 SUCLG2Q96I99 432 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 MPHOSPH8Q99549 860 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 TM6SF1Q9BZW5 370 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 ADGRB1O14514 1584 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 ARHGEF10O15013 1369 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 STARD3NLO95772 234 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 IL15P40933 162 aaPredicted RBP6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 CREB3L3Q68CJ9 461 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZNF592Q92610 1267 aa6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 TTC12Q9H892 705 aaPredicted RBP6.65□□□□□ -1.35
SYNCRIP-204ENST00000616122 MAP3K4Q9Y6R4 1608 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 CPSF1Q10570 1443 aaKnown RBP6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 CCT2P78371 535 aaKnown RBP6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 METTL24Q5JXM2 366 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 AOX1Q06278 1338 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 HAND2P61296 217 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 CEP57L1Q8IYX8 460 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 BICC1Q9H694 974 aaKnown RBP6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 CWC25Q9NXE8 425 aaPredicted RBP6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 CDK12Q9NYV4 1490 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms