RNA–Protein interactions for RNA: ENST00000615631.4

FDFT1-223, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

APPRIS P1 TSL 5 BASIC

Gene FDFT1, Length 2,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-223	ENST00000615631	NBPF10	Q6P3W6	841 aa	Known RBP	18.3	■□□□□ 0.52
FDFT1-223	ENST00000615631	NBPF15	Q8N660	670 aa		18.3	■□□□□ 0.52
FDFT1-223	ENST00000615631	AK7	Q96M32	723 aa		18.3	■□□□□ 0.52
FDFT1-223	ENST00000615631	HYPK	Q9NX55	129 aa		18.3	■□□□□ 0.52
FDFT1-223	ENST00000615631	MYL6B	P14649	208 aa		18.3	■□□□□ 0.52
FDFT1-223	ENST00000615631	CANX	P27824	592 aa	Known RBP	18.3	■□□□□ 0.52
FDFT1-223	ENST00000615631	BCL2L13	Q9BXK5	485 aa		18.3	■□□□□ 0.52
FDFT1-223	ENST00000615631	IL6ST	P40189	918 aa	Predicted RBP	18.29	■□□□□ 0.52
FDFT1-223	ENST00000615631	PIP4K2A	P48426	406 aa	Predicted RBP	18.29	■□□□□ 0.52
FDFT1-223	ENST00000615631	GNPAT	O15228	680 aa		18.29	■□□□□ 0.52
FDFT1-223	ENST00000615631	PROSER3	Q2NL68	480 aa		18.29	■□□□□ 0.52
FDFT1-223	ENST00000615631	BRPF1	P55201	1214 aa	Predicted RBP	18.28	■□□□□ 0.52
FDFT1-223	ENST00000615631	NPM2	Q86SE8	214 aa	Known RBP	18.28	■□□□□ 0.52
FDFT1-223	ENST00000615631	PDCL3	Q9H2J4	239 aa		18.28	■□□□□ 0.52
FDFT1-223	ENST00000615631	ANXA1	P04083	346 aa		18.28	■□□□□ 0.52
FDFT1-223	ENST00000615631	MRPL50	Q8N5N7	158 aa	Known RBP	18.28	■□□□□ 0.52
FDFT1-223	ENST00000615631	TUBGCP6	Q96RT7	1819 aa		18.28	■□□□□ 0.52
FDFT1-223	ENST00000615631	RPS6KA4	O75676	772 aa		18.27	■□□□□ 0.52
FDFT1-223	ENST00000615631	LRP10	Q7Z4F1	713 aa		18.27	■□□□□ 0.52
FDFT1-223	ENST00000615631	RTCB	Q9Y3I0	505 aa	Known RBP	18.27	■□□□□ 0.52
FDFT1-223	ENST00000615631	AKT1S1	Q96B36	256 aa		18.27	■□□□□ 0.51
FDFT1-223	ENST00000615631	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.27	■□□□□ 0.51
FDFT1-223	ENST00000615631	KIF16B	Q96L93	1317 aa		18.27	■□□□□ 0.51
FDFT1-223	ENST00000615631	QSER1	Q2KHR3	1735 aa		18.27	■□□□□ 0.51
FDFT1-223	ENST00000615631	BCAR3	O75815	825 aa		18.26	■□□□□ 0.51
FDFT1-223	ENST00000615631	EIF5	P55010	431 aa	Known RBP	18.26	■□□□□ 0.51
FDFT1-223	ENST00000615631	COL15A1	P39059	1388 aa		18.26	■□□□□ 0.51
FDFT1-223	ENST00000615631	C4A	P0C0L4	1744 aa		18.25	■□□□□ 0.51
FDFT1-223	ENST00000615631	ZNF827	Q17R98	1081 aa		18.25	■□□□□ 0.51
FDFT1-223	ENST00000615631	FLII	Q13045	1269 aa		18.25	■□□□□ 0.51
FDFT1-223	ENST00000615631	PHAX	Q9H814	394 aa	Known RBP	18.25	■□□□□ 0.51
FDFT1-223	ENST00000615631	STK32B	Q9NY57	414 aa		18.25	■□□□□ 0.51
FDFT1-223	ENST00000615631	ADRA2B	P18089	450 aa		18.24	■□□□□ 0.51
FDFT1-223	ENST00000615631	SSFA2	P28290	1259 aa		18.24	■□□□□ 0.51
FDFT1-223	ENST00000615631	TFCP2L1	Q9NZI6	479 aa		18.24	■□□□□ 0.51
FDFT1-223	ENST00000615631	PTPRC	P08575	1304 aa		18.24	■□□□□ 0.51
FDFT1-223	ENST00000615631		A0A087WZG4	1122 aa		18.24	■□□□□ 0.51
FDFT1-223	ENST00000615631	COPS6	Q7L5N1	327 aa		18.24	■□□□□ 0.51
FDFT1-223	ENST00000615631	G2E3	Q7L622	706 aa		18.24	■□□□□ 0.51
FDFT1-223	ENST00000615631	XAGE3	Q8WTP9	111 aa		18.24	■□□□□ 0.51
FDFT1-223	ENST00000615631	SLC15A2	Q16348	729 aa		18.23	■□□□□ 0.51
FDFT1-223	ENST00000615631	DDX58	O95786	925 aa	Known RBP	18.23	■□□□□ 0.51
FDFT1-223	ENST00000615631	AIMP1	Q12904	312 aa	Known RBP	18.23	■□□□□ 0.51
FDFT1-223	ENST00000615631	BCOR	Q6W2J9	1755 aa		18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	FKBP5	Q13451	457 aa	Predicted RBP	18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	TRAPPC3L	Q5T215	181 aa		18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	KIF6	Q6ZMV9	814 aa		18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	DHX37	Q8IY37	1157 aa	Known RBP	18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	SCN7A	Q01118	1682 aa		18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	ARFGEF2	Q9Y6D5	1785 aa		18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	IPO8	O15397	1037 aa	Known RBP	18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	PHF14	O94880	888 aa		18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	NOB1	Q9ULX3	412 aa	Known RBP	18.22	■□□□□ 0.51
FDFT1-223	ENST00000615631	AMIGO3	Q86WK7	504 aa		18.21	■□□□□ 0.51
FDFT1-223	ENST00000615631	DZIP3	Q86Y13	1208 aa	Known RBP	18.21	■□□□□ 0.51
FDFT1-223	ENST00000615631	FLAD1	Q8NFF5	587 aa		18.21	■□□□□ 0.51
FDFT1-223	ENST00000615631	ARHGAP45	Q92619	1136 aa		18.21	■□□□□ 0.5
FDFT1-223	ENST00000615631	TTLL7	Q6ZT98	887 aa		18.2	■□□□□ 0.5
FDFT1-223	ENST00000615631	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.2	■□□□□ 0.5
FDFT1-223	ENST00000615631	NFKBIB	Q15653	356 aa		18.2	■□□□□ 0.5
FDFT1-223	ENST00000615631	ANKRD13D	Q6ZTN6	518 aa		18.2	■□□□□ 0.5
FDFT1-223	ENST00000615631	ARHGEF1	Q92888	912 aa	Known RBP	18.2	■□□□□ 0.5
FDFT1-223	ENST00000615631	RFC4	P35249	363 aa		18.19	■□□□□ 0.5
FDFT1-223	ENST00000615631	ZKSCAN2	Q63HK3	967 aa		18.19	■□□□□ 0.5
FDFT1-223	ENST00000615631	PLBD2	Q8NHP8	589 aa		18.19	■□□□□ 0.5
FDFT1-223	ENST00000615631	TBC1D2B	Q9UPU7	963 aa		18.19	■□□□□ 0.5
FDFT1-223	ENST00000615631	MAP3K15	Q6ZN16	1313 aa		18.19	■□□□□ 0.5
FDFT1-223	ENST00000615631	KSR2	Q6VAB6	950 aa		18.18	■□□□□ 0.5
FDFT1-223	ENST00000615631	SMIM5	Q71RC9	77 aa		18.18	■□□□□ 0.5
FDFT1-223	ENST00000615631	PNPLA7	Q6ZV29	1317 aa		18.18	■□□□□ 0.5
FDFT1-223	ENST00000615631	NUP98	P52948	1817 aa		18.18	■□□□□ 0.5
FDFT1-223	ENST00000615631	ATF7IP	Q6VMQ6	1270 aa		18.18	■□□□□ 0.5
FDFT1-223	ENST00000615631	API5	Q9BZZ5	524 aa	Known RBP	18.18	■□□□□ 0.5
FDFT1-223	ENST00000615631	NARF	Q9UHQ1	456 aa		18.18	■□□□□ 0.5
FDFT1-223	ENST00000615631	ADCY9	O60503	1353 aa		18.18	■□□□□ 0.5
FDFT1-223	ENST00000615631	PI4KAP2	A4QPH2	592 aa		18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	ERVV-1	B6SEH8	477 aa		18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	ZPR1	O75312	459 aa		18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	RIC3	Q7Z5B4	369 aa		18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	PI4KAP1	Q8N8J0	262 aa		18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	ZBTB3	Q9H5J0	574 aa		18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	ANKRD36C	Q5JPF3	1778 aa		18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	CLCN1	P35523	988 aa		18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	USP42	Q9H9J4	1324 aa	Known RBP	18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.17	■□□□□ 0.5
FDFT1-223	ENST00000615631	RGL2	O15211	777 aa		18.16	■□□□□ 0.5
FDFT1-223	ENST00000615631	PXDNL	A1KZ92	1463 aa		18.16	■□□□□ 0.5
FDFT1-223	ENST00000615631	SOCS7	O14512	581 aa		18.16	■□□□□ 0.5
FDFT1-223	ENST00000615631	CAMTA2	O94983	1202 aa		18.16	■□□□□ 0.5
FDFT1-223	ENST00000615631	TRIM27	P14373	513 aa		18.16	■□□□□ 0.5
FDFT1-223	ENST00000615631	RRP1	P56182	461 aa	Known RBP	18.16	■□□□□ 0.5
FDFT1-223	ENST00000615631	ZNF652	Q9Y2D9	606 aa		18.16	■□□□□ 0.5
FDFT1-223	ENST00000615631	MAP3K2	Q9Y2U5	619 aa		18.16	■□□□□ 0.5
FDFT1-223	ENST00000615631	COL23A1	Q86Y22	540 aa	Predicted RBP	18.15	■□□□□ 0.5
FDFT1-223	ENST00000615631	NCL	P19338	710 aa	Known RBP	18.15	■□□□□ 0.5
FDFT1-223	ENST00000615631	DNAAF4	Q8WXU2	420 aa		18.15	■□□□□ 0.5
FDFT1-223	ENST00000615631		F6X3S4	739 aa		18.14	■□□□□ 0.5
FDFT1-223	ENST00000615631	MS4A1	P11836	297 aa		18.14	■□□□□ 0.5
FDFT1-223	ENST00000615631	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.14	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms