RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 KSR2Q6VAB6 950 aa14.53□□□□□ -0.08
TUBD1-216ENST00000613721 TOM1L2Q6ZVM7 507 aa14.53□□□□□ -0.08
TUBD1-216ENST00000613721 NFATC2IPQ8NCF5 419 aa14.53□□□□□ -0.08
TUBD1-216ENST00000613721 IL17RAQ96F46 866 aa14.53□□□□□ -0.08
TUBD1-216ENST00000613721 TMX3Q96JJ7 454 aa14.53□□□□□ -0.08
TUBD1-216ENST00000613721 SCN11AQ9UI33 1791 aa14.53□□□□□ -0.08
TUBD1-216ENST00000613721 PIP4K2AP48426 406 aaPredicted RBP14.53□□□□□ -0.08
TUBD1-216ENST00000613721 CPDO75976 1380 aa14.52□□□□□ -0.08
TUBD1-216ENST00000613721 ABCA3Q99758 1704 aa14.52□□□□□ -0.08
TUBD1-216ENST00000613721 OS9Q13438 667 aaPredicted RBP14.52□□□□□ -0.08
TUBD1-216ENST00000613721 LARP1Q6PKG0 1096 aaKnown RBP14.52□□□□□ -0.08
TUBD1-216ENST00000613721 CNTROBQ8N137 903 aa14.52□□□□□ -0.08
TUBD1-216ENST00000613721 C9orf78Q9NZ63 289 aaPredicted RBP14.52□□□□□ -0.08
TUBD1-216ENST00000613721 MAP4K4O95819 1239 aaPredicted RBP14.51□□□□□ -0.09
TUBD1-216ENST00000613721 HYPKQ9NX55 129 aa14.51□□□□□ -0.09
TUBD1-216ENST00000613721 HDAC5Q9UQL6 1122 aa14.51□□□□□ -0.09
TUBD1-216ENST00000613721 GAS2L3Q86XJ1 694 aa14.51□□□□□ -0.09
TUBD1-216ENST00000613721 IL25Q9H293 177 aa14.51□□□□□ -0.09
TUBD1-216ENST00000613721 USP42Q9H9J4 1324 aaKnown RBP14.51□□□□□ -0.09
TUBD1-216ENST00000613721 C5P01031 1676 aa14.51□□□□□ -0.09
TUBD1-216ENST00000613721 CUL4AQ13619 759 aa14.5□□□□□ -0.09
TUBD1-216ENST00000613721 ZDHHC9Q9Y397 364 aa14.5□□□□□ -0.09
TUBD1-216ENST00000613721 TTC41PQ6P2S7 1318 aa14.5□□□□□ -0.09
TUBD1-216ENST00000613721 COL5A2P05997 1499 aaPredicted RBP14.5□□□□□ -0.09
TUBD1-216ENST00000613721 RAD50Q92878 1312 aa14.5□□□□□ -0.09
TUBD1-216ENST00000613721 SGSM2O43147 1006 aa14.5□□□□□ -0.09
TUBD1-216ENST00000613721 HSPA4P34932 840 aa14.5□□□□□ -0.09
TUBD1-216ENST00000613721 CWF19L2Q2TBE0 894 aaKnown RBP14.5□□□□□ -0.09
TUBD1-216ENST00000613721 LMBRD1Q9NUN5 540 aa14.5□□□□□ -0.09
TUBD1-216ENST00000613721 SPG7Q9UQ90 795 aa14.5□□□□□ -0.09
TUBD1-216ENST00000613721 NHSL1Q5SYE7 1610 aa14.49□□□□□ -0.09
TUBD1-216ENST00000613721 DDX58O95786 925 aaKnown RBP14.49□□□□□ -0.09
TUBD1-216ENST00000613721 CLASRPQ8N2M8 674 aaKnown RBP14.49□□□□□ -0.09
TUBD1-216ENST00000613721 LINS1Q8NG48 757 aa14.49□□□□□ -0.09
TUBD1-216ENST00000613721 SLC52A2Q9HAB3 445 aa14.49□□□□□ -0.09
TUBD1-216ENST00000613721 DDX21Q9NR30 783 aaKnown RBP eCLIP14.49□□□□□ -0.09
TUBD1-216ENST00000613721 WDR17Q8IZU2 1322 aa14.49□□□□□ -0.09
TUBD1-216ENST00000613721 GLRX3O76003 335 aaKnown RBP14.49□□□□□ -0.09
TUBD1-216ENST00000613721 ERC1Q8IUD2 1116 aa14.49□□□□□ -0.09
TUBD1-216ENST00000613721 IFNL2Q8IZJ0 200 aa14.49□□□□□ -0.09
TUBD1-216ENST00000613721 INTS4Q96HW7 963 aaKnown RBP14.49□□□□□ -0.09
TUBD1-216ENST00000613721 UPF3BQ9BZI7 483 aaKnown RBP14.49□□□□□ -0.09
TUBD1-216ENST00000613721 NOL8Q76FK4 1167 aaKnown RBP14.48□□□□□ -0.09
TUBD1-216ENST00000613721 GRM8O00222 908 aa14.47□□□□□ -0.09
TUBD1-216ENST00000613721 AIMP1Q12904 312 aaKnown RBP14.47□□□□□ -0.09
TUBD1-216ENST00000613721 ZNF790Q6PG37 636 aa14.47□□□□□ -0.09
TUBD1-216ENST00000613721 DDX54Q8TDD1 881 aaKnown RBP14.47□□□□□ -0.09
TUBD1-216ENST00000613721 ZNF496Q96IT1 587 aaPredicted RBP14.47□□□□□ -0.09
TUBD1-216ENST00000613721 ABCC6O95255 1503 aa14.47□□□□□ -0.09
TUBD1-216ENST00000613721 GPATCH3Q96I76 525 aa14.47□□□□□ -0.09
TUBD1-216ENST00000613721 ROBO1Q9Y6N7 1651 aa14.47□□□□□ -0.09
TUBD1-216ENST00000613721 UTYO14607 1347 aa14.46□□□□□ -0.09
TUBD1-216ENST00000613721 MYL6BP14649 208 aa14.46□□□□□ -0.09
TUBD1-216ENST00000613721 EVA1CP58658 441 aa14.46□□□□□ -0.09
TUBD1-216ENST00000613721 RRAGDQ9NQL2 400 aaPredicted RBP14.46□□□□□ -0.09
TUBD1-216ENST00000613721 PA2G4Q9UQ80 394 aaKnown RBP14.46□□□□□ -0.09
TUBD1-216ENST00000613721 NCLP19338 710 aaKnown RBP14.46□□□□□ -0.1
TUBD1-216ENST00000613721 PDIA6Q15084 440 aa14.46□□□□□ -0.1
TUBD1-216ENST00000613721 CAVIN1Q6NZI2 390 aaKnown RBP14.46□□□□□ -0.1
TUBD1-216ENST00000613721 KIAA1211Q6ZU35 1233 aa14.46□□□□□ -0.1
TUBD1-216ENST00000613721 LSG1Q9H089 658 aaKnown RBP14.46□□□□□ -0.1
TUBD1-216ENST00000613721 ECHDC1Q9NTX5 307 aa14.46□□□□□ -0.1
TUBD1-216ENST00000613721 PKD1L3Q7Z443 1732 aa14.45□□□□□ -0.1
TUBD1-216ENST00000613721 PRPF40AO75400 957 aaKnown RBP14.45□□□□□ -0.1
TUBD1-216ENST00000613721 BRD1O95696 1058 aa14.45□□□□□ -0.1
TUBD1-216ENST00000613721 IFIT2P09913 472 aaKnown RBP14.45□□□□□ -0.1
TUBD1-216ENST00000613721 CWC27Q6UX04 472 aaKnown RBP14.45□□□□□ -0.1
TUBD1-216ENST00000613721 SUCLG2Q96I99 432 aa14.45□□□□□ -0.1
TUBD1-216ENST00000613721 DIAPH3Q9NSV4 1193 aa14.45□□□□□ -0.1
TUBD1-216ENST00000613721 BTG4Q9NY30 223 aa14.45□□□□□ -0.1
TUBD1-216ENST00000613721 ZNF445P59923 1031 aa14.44□□□□□ -0.1
TUBD1-216ENST00000613721 BICC1Q9H694 974 aaKnown RBP14.44□□□□□ -0.1
TUBD1-216ENST00000613721 USP16Q9Y5T5 823 aa14.44□□□□□ -0.1
TUBD1-216ENST00000613721 SNX14Q9Y5W7 946 aa14.44□□□□□ -0.1
TUBD1-216ENST00000613721 FOXD4L5Q5VV16 416 aaPredicted RBP14.44□□□□□ -0.1
TUBD1-216ENST00000613721 RIC3Q7Z5B4 369 aa14.44□□□□□ -0.1
TUBD1-216ENST00000613721 ZCRB1Q8TBF4 217 aaKnown RBP14.44□□□□□ -0.1
TUBD1-216ENST00000613721 RUFY2Q8WXA3 655 aa14.44□□□□□ -0.1
TUBD1-216ENST00000613721 FOXD4L4Q8WXT5 416 aaPredicted RBP14.44□□□□□ -0.1
TUBD1-216ENST00000613721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.44□□□□□ -0.17e-6■■□□□ 12.8
TUBD1-216ENST00000613721 MRC1P22897 1456 aa14.44□□□□□ -0.1
TUBD1-216ENST00000613721 CABP4P57796 275 aa14.43□□□□□ -0.1
TUBD1-216ENST00000613721 NEXNQ0ZGT2 675 aa14.43□□□□□ -0.1
TUBD1-216ENST00000613721 AACSQ86V21 672 aa14.43□□□□□ -0.1
TUBD1-216ENST00000613721 KAZALD1Q96I82 304 aa14.43□□□□□ -0.1
TUBD1-216ENST00000613721 DCAF5Q96JK2 942 aa14.43□□□□□ -0.1
TUBD1-216ENST00000613721 PLEKHG2Q9H7P9 1386 aa14.43□□□□□ -0.1
TUBD1-216ENST00000613721 PIP4K2BP78356 416 aa14.43□□□□□ -0.1
TUBD1-216ENST00000613721 ZSCAN23Q3MJ62 389 aa14.43□□□□□ -0.1
TUBD1-216ENST00000613721 IGKV5-2P06315 115 aa14.42□□□□□ -0.1
TUBD1-216ENST00000613721 NASPP49321 788 aaPredicted RBP14.42□□□□□ -0.1
TUBD1-216ENST00000613721 G3BP1Q13283 466 aaKnown RBP eCLIP14.42□□□□□ -0.1
TUBD1-216ENST00000613721 GPT2Q8TD30 523 aa14.42□□□□□ -0.1
TUBD1-216ENST00000613721 AFDNP55196 1824 aaKnown RBP14.42□□□□□ -0.1
TUBD1-216ENST00000613721 IL2RBP14784 551 aa14.41□□□□□ -0.1
TUBD1-216ENST00000613721 EVI5LQ96CN4 794 aa14.41□□□□□ -0.1
TUBD1-216ENST00000613721 CHAMP1Q96JM3 812 aa14.41□□□□□ -0.1
TUBD1-216ENST00000613721 TTC14Q96N46 770 aa14.41□□□□□ -0.1
TUBD1-216ENST00000613721 CARD10Q9BWT7 1032 aa14.41□□□□□ -0.1
TUBD1-216ENST00000613721 SHANK3Q9BYB0 1731 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms