RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
LINC01138-204ENST00000613452 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
LINC01138-204ENST00000613452 RRAGCQ9HB90 399 aa12.72□□□□□ -0.37
LINC01138-204ENST00000613452 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.37
LINC01138-204ENST00000613452 NPHP1O15259 732 aa12.71□□□□□ -0.37
LINC01138-204ENST00000613452 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
LINC01138-204ENST00000613452 DNAJC5GQ8N7S2 189 aa12.71□□□□□ -0.37
LINC01138-204ENST00000613452 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.38
LINC01138-204ENST00000613452 LTBP3Q9NS15 1303 aa12.7□□□□□ -0.38
LINC01138-204ENST00000613452 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
LINC01138-204ENST00000613452 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
LINC01138-204ENST00000613452 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
LINC01138-204ENST00000613452 NFKBIEO00221 500 aa12.69□□□□□ -0.38
LINC01138-204ENST00000613452 C21orf2O43822 256 aa12.69□□□□□ -0.38
LINC01138-204ENST00000613452 NPR1P16066 1061 aa12.69□□□□□ -0.38
LINC01138-204ENST00000613452 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
LINC01138-204ENST00000613452 PRELPP51888 382 aa12.69□□□□□ -0.38
LINC01138-204ENST00000613452 NIP7Q9Y221 180 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC01138-204ENST00000613452 MAPK8IP3Q9UPT6 1336 aa12.68□□□□□ -0.38
LINC01138-204ENST00000613452 AFDNP55196 1824 aaKnown RBP12.68□□□□□ -0.38
LINC01138-204ENST00000613452 RASSF7Q02833 373 aa12.68□□□□□ -0.38
LINC01138-204ENST00000613452 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
LINC01138-204ENST00000613452 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
LINC01138-204ENST00000613452 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
LINC01138-204ENST00000613452 ERBB4Q15303 1308 aa12.67□□□□□ -0.38
LINC01138-204ENST00000613452 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
LINC01138-204ENST00000613452 HLFQ16534 295 aa12.67□□□□□ -0.38
LINC01138-204ENST00000613452 CCDC24Q8N4L8 307 aa12.67□□□□□ -0.38
LINC01138-204ENST00000613452 TAOK3Q9H2K8 898 aa12.67□□□□□ -0.38
LINC01138-204ENST00000613452 RIPK4P57078 832 aa12.66□□□□□ -0.38
LINC01138-204ENST00000613452 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
LINC01138-204ENST00000613452 ERFEQ4G0M1 354 aa12.66□□□□□ -0.38
LINC01138-204ENST00000613452 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
LINC01138-204ENST00000613452 PRPF40BQ6NWY9 871 aaKnown RBP12.66□□□□□ -0.38
LINC01138-204ENST00000613452 RTKN2Q8IZC4 609 aa12.66□□□□□ -0.38
LINC01138-204ENST00000613452 MAP3K15Q6ZN16 1313 aa12.65□□□□□ -0.38
LINC01138-204ENST00000613452 GTF2E1P29083 439 aaPredicted RBP12.65□□□□□ -0.38
LINC01138-204ENST00000613452 CC2D2BQ6DHV5 1058 aa12.65□□□□□ -0.38
LINC01138-204ENST00000613452 RRP7AQ9Y3A4 280 aaKnown RBP12.65□□□□□ -0.38
LINC01138-204ENST00000613452 SBF1O95248 1867 aa12.64□□□□□ -0.39
LINC01138-204ENST00000613452 POTECB2RU33 542 aa12.64□□□□□ -0.39
LINC01138-204ENST00000613452 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
LINC01138-204ENST00000613452 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
LINC01138-204ENST00000613452 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
LINC01138-204ENST00000613452 HOXA10P31260 410 aaPredicted RBP12.63□□□□□ -0.39
LINC01138-204ENST00000613452 CRY2Q49AN0 593 aa12.63□□□□□ -0.39
LINC01138-204ENST00000613452 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
LINC01138-204ENST00000613452 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
LINC01138-204ENST00000613452 TSPYL4Q9UJ04 414 aa12.63□□□□□ -0.39
LINC01138-204ENST00000613452 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC01138-204ENST00000613452 DDX10Q13206 875 aaKnown RBP12.62□□□□□ -0.39
LINC01138-204ENST00000613452 PARP10Q53GL7 1025 aa12.62□□□□□ -0.39
LINC01138-204ENST00000613452 SLC10A5Q5PT55 438 aa12.62□□□□□ -0.39
LINC01138-204ENST00000613452 IFFO2Q5TF58 517 aa12.62□□□□□ -0.39
LINC01138-204ENST00000613452 GIGYF2Q6Y7W6 1299 aaKnown RBP12.62□□□□□ -0.39
LINC01138-204ENST00000613452 TTLL7Q6ZT98 887 aa12.62□□□□□ -0.39
LINC01138-204ENST00000613452 PPP1R42Q7Z4L9 355 aa12.62□□□□□ -0.39
LINC01138-204ENST00000613452 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
LINC01138-204ENST00000613452 JMYQ8N9B5 988 aa12.62□□□□□ -0.39
LINC01138-204ENST00000613452 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
LINC01138-204ENST00000613452 THUMPD2Q9BTF0 503 aaKnown RBP12.62□□□□□ -0.39
LINC01138-204ENST00000613452 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
LINC01138-204ENST00000613452 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
LINC01138-204ENST00000613452 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
LINC01138-204ENST00000613452 CHL1O00533 1208 aa12.61□□□□□ -0.39
LINC01138-204ENST00000613452 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
LINC01138-204ENST00000613452 CRAMP1Q96RY5 1269 aa12.61□□□□□ -0.39
LINC01138-204ENST00000613452 IBTKQ9P2D0 1353 aaPredicted RBP12.6□□□□□ -0.39
LINC01138-204ENST00000613452 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
LINC01138-204ENST00000613452 MYL6BP14649 208 aa12.6□□□□□ -0.39
LINC01138-204ENST00000613452 PDIA6Q15084 440 aa12.6□□□□□ -0.39
LINC01138-204ENST00000613452 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
LINC01138-204ENST00000613452 LRP10Q7Z4F1 713 aa12.6□□□□□ -0.39
LINC01138-204ENST00000613452 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
LINC01138-204ENST00000613452 PSMD1Q99460 953 aa12.6□□□□□ -0.39
LINC01138-204ENST00000613452 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
LINC01138-204ENST00000613452 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
LINC01138-204ENST00000613452 DDNO94850 711 aaPredicted RBP12.59□□□□□ -0.39
LINC01138-204ENST00000613452 HSP90AB3PQ58FF7 597 aa12.59□□□□□ -0.39
LINC01138-204ENST00000613452 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
LINC01138-204ENST00000613452 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
LINC01138-204ENST00000613452 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
LINC01138-204ENST00000613452 VPS33BQ9H267 617 aa12.59□□□□□ -0.39
LINC01138-204ENST00000613452 RNF123Q5XPI4 1314 aa12.59□□□□□ -0.39
LINC01138-204ENST00000613452 FZD9O00144 591 aa12.58□□□□□ -0.4
LINC01138-204ENST00000613452 HOXB7P09629 217 aa12.58□□□□□ -0.4
LINC01138-204ENST00000613452 EIF2S2P20042 333 aaKnown RBP12.58□□□□□ -0.4
LINC01138-204ENST00000613452 RIC1Q4ADV7 1423 aa12.58□□□□□ -0.4
LINC01138-204ENST00000613452 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
LINC01138-204ENST00000613452 RPGRQ92834 1020 aaKnown RBP12.58□□□□□ -0.4
LINC01138-204ENST00000613452 ZBTB3Q9H5J0 574 aa12.58□□□□□ -0.4
LINC01138-204ENST00000613452 BCORQ6W2J9 1755 aa12.57□□□□□ -0.4
LINC01138-204ENST00000613452 WDR43Q15061 677 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC01138-204ENST00000613452 NUTM1Q86Y26 1132 aa12.57□□□□□ -0.4
LINC01138-204ENST00000613452 UTP14AQ9BVJ6 771 aaKnown RBP12.57□□□□□ -0.4
LINC01138-204ENST00000613452 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC01138-204ENST00000613452 ADAMTS8Q9UP79 889 aa12.57□□□□□ -0.4
LINC01138-204ENST00000613452 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
LINC01138-204ENST00000613452 SLX4Q8IY92 1834 aa12.57□□□□□ -0.4
LINC01138-204ENST00000613452 TNRC6CQ9HCJ0 1690 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms