RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 HYPKQ9NX55 129 aa11.93□□□□□ -0.5
ATF3-210ENST00000613104 LRP5O75197 1615 aa11.93□□□□□ -0.5
ATF3-210ENST00000613104 COL15A1P39059 1388 aa11.92□□□□□ -0.5
ATF3-210ENST00000613104 A0A087WZG4 1122 aa11.92□□□□□ -0.5
ATF3-210ENST00000613104 TFCP2L1Q9NZI6 479 aa11.92□□□□□ -0.5
ATF3-210ENST00000613104 BCORQ6W2J9 1755 aa11.92□□□□□ -0.5
ATF3-210ENST00000613104 PNPLA7Q6ZV29 1317 aa11.91□□□□□ -0.5
ATF3-210ENST00000613104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
ATF3-210ENST00000613104 TRAPPC3LQ5T215 181 aa11.91□□□□□ -0.5
ATF3-210ENST00000613104 SMIM5Q71RC9 77 aa11.91□□□□□ -0.5
ATF3-210ENST00000613104 G2E3Q7L622 706 aa11.91□□□□□ -0.5
ATF3-210ENST00000613104 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
ATF3-210ENST00000613104 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
ATF3-210ENST00000613104 PHAXQ9H814 394 aaKnown RBP11.91□□□□□ -0.5
ATF3-210ENST00000613104 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
ATF3-210ENST00000613104 COPS6Q7L5N1 327 aa11.9□□□□□ -0.5
ATF3-210ENST00000613104 COL23A1Q86Y22 540 aaPredicted RBP11.9□□□□□ -0.5
ATF3-210ENST00000613104 XAGE3Q8WTP9 111 aa11.9□□□□□ -0.5
ATF3-210ENST00000613104 BCL2L13Q9BXK5 485 aa11.9□□□□□ -0.5
ATF3-210ENST00000613104 SMC4Q9NTJ3 1288 aa11.9□□□□□ -0.5
ATF3-210ENST00000613104 RCAN3Q9UKA8 241 aa11.9□□□□□ -0.5
ATF3-210ENST00000613104 CASZ1Q86V15 1759 aa11.9□□□□□ -0.51
ATF3-210ENST00000613104 ERVV-1B6SEH8 477 aa11.89□□□□□ -0.51
ATF3-210ENST00000613104 RGL2O15211 777 aa11.89□□□□□ -0.51
ATF3-210ENST00000613104 BCAR3O75815 825 aa11.89□□□□□ -0.51
ATF3-210ENST00000613104 PHF14O94880 888 aa11.89□□□□□ -0.51
ATF3-210ENST00000613104 FLIIQ13045 1269 aa11.89□□□□□ -0.51
ATF3-210ENST00000613104 TTLL7Q6ZT98 887 aa11.89□□□□□ -0.51
ATF3-210ENST00000613104 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
ATF3-210ENST00000613104 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
ATF3-210ENST00000613104 ZNF330Q9Y3S2 320 aaPredicted RBP11.89□□□□□ -0.51
ATF3-210ENST00000613104 MAP3K15Q6ZN16 1313 aa11.88□□□□□ -0.51
ATF3-210ENST00000613104 USP42Q9H9J4 1324 aaKnown RBP11.88□□□□□ -0.51
ATF3-210ENST00000613104 NUP98P52948 1817 aa11.88□□□□□ -0.51
ATF3-210ENST00000613104 ARFGEF2Q9Y6D5 1785 aa11.88□□□□□ -0.51
ATF3-210ENST00000613104 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
ATF3-210ENST00000613104 AIMP1Q12904 312 aaKnown RBP11.88□□□□□ -0.51
ATF3-210ENST00000613104 NPM2Q86SE8 214 aaKnown RBP11.88□□□□□ -0.51
ATF3-210ENST00000613104 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
ATF3-210ENST00000613104 PTPRCP08575 1304 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 RFC4P35249 363 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 KSR2Q6VAB6 950 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 PLBD2Q8NHP8 589 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 ARHGAP45Q92619 1136 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 SRP68Q9UHB9 627 aaKnown RBP11.87□□□□□ -0.51
ATF3-210ENST00000613104 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
ATF3-210ENST00000613104 ADCY9O60503 1353 aa11.87□□□□□ -0.51
ATF3-210ENST00000613104 COL24A1Q17RW2 1714 aa11.86□□□□□ -0.51
ATF3-210ENST00000613104 ZPR1O75312 459 aa11.86□□□□□ -0.51
ATF3-210ENST00000613104 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
ATF3-210ENST00000613104 FKBP5Q13451 457 aaPredicted RBP11.86□□□□□ -0.51
ATF3-210ENST00000613104 R3HDM1Q15032 1099 aaKnown RBP11.86□□□□□ -0.51
ATF3-210ENST00000613104 HLFQ16534 295 aa11.86□□□□□ -0.51
ATF3-210ENST00000613104 USPL1Q5W0Q7 1092 aa11.86□□□□□ -0.51
ATF3-210ENST00000613104 CLEC4GQ6UXB4 293 aa11.86□□□□□ -0.51
ATF3-210ENST00000613104 GIGYF2Q6Y7W6 1299 aaKnown RBP11.86□□□□□ -0.51
ATF3-210ENST00000613104 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
ATF3-210ENST00000613104 ANKRD36CQ5JPF3 1778 aa11.86□□□□□ -0.51
ATF3-210ENST00000613104 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
ATF3-210ENST00000613104 GYS1P13807 737 aa11.85□□□□□ -0.51
ATF3-210ENST00000613104 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
ATF3-210ENST00000613104 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
ATF3-210ENST00000613104 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
ATF3-210ENST00000613104 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
ATF3-210ENST00000613104 ARXQ96QS3 562 aa11.85□□□□□ -0.51
ATF3-210ENST00000613104 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
ATF3-210ENST00000613104 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
ATF3-210ENST00000613104 ATP10DQ9P241 1426 aa11.85□□□□□ -0.51
ATF3-210ENST00000613104 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
ATF3-210ENST00000613104 IPO8O15397 1037 aaKnown RBP11.84□□□□□ -0.51
ATF3-210ENST00000613104 ZKSCAN2Q63HK3 967 aa11.84□□□□□ -0.51
ATF3-210ENST00000613104 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
ATF3-210ENST00000613104 DNAAF4Q8WXU2 420 aa11.84□□□□□ -0.51
ATF3-210ENST00000613104 METTL22Q9BUU2 404 aaPredicted RBP11.84□□□□□ -0.51
ATF3-210ENST00000613104 API5Q9BZZ5 524 aaKnown RBP11.84□□□□□ -0.51
ATF3-210ENST00000613104 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
ATF3-210ENST00000613104 MAP3K2Q9Y2U5 619 aa11.84□□□□□ -0.51
ATF3-210ENST00000613104 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
ATF3-210ENST00000613104 TCIRG1Q13488 830 aa11.83□□□□□ -0.52
ATF3-210ENST00000613104 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
ATF3-210ENST00000613104 ATF7IPQ6VMQ6 1270 aa11.83□□□□□ -0.52
ATF3-210ENST00000613104 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
ATF3-210ENST00000613104 RNF123Q5XPI4 1314 aa11.83□□□□□ -0.52
ATF3-210ENST00000613104 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
ATF3-210ENST00000613104 F6X3S4 739 aa11.82□□□□□ -0.52
ATF3-210ENST00000613104 TRIM27P14373 513 aa11.82□□□□□ -0.52
ATF3-210ENST00000613104 YY1P25490 414 aa11.82□□□□□ -0.52
ATF3-210ENST00000613104 TBC1D9BQ66K14 1250 aa11.82□□□□□ -0.52
ATF3-210ENST00000613104 ZNF34Q8IZ26 560 aa11.82□□□□□ -0.52
ATF3-210ENST00000613104 NLGN1Q8N2Q7 840 aa11.82□□□□□ -0.52
ATF3-210ENST00000613104 ISCA1Q9BUE6 129 aa11.82□□□□□ -0.52
ATF3-210ENST00000613104 ABCC4O15439 1325 aa11.82□□□□□ -0.52
ATF3-210ENST00000613104 AFDNP55196 1824 aaKnown RBP11.81□□□□□ -0.52
ATF3-210ENST00000613104 IBTKQ9P2D0 1353 aaPredicted RBP11.81□□□□□ -0.52
ATF3-210ENST00000613104 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
ATF3-210ENST00000613104 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms