RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 TCP11L2Q8N4U5 519 aa13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 NUP62CLQ9H1M0 184 aa13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 ITM2BQ9Y287 266 aa13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 SRGAP3O43295 1099 aa13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 EXOSC9Q06265 439 aaKnown RBP13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 ABT1Q9ULW3 272 aaKnown RBP13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 USO1O60763 962 aaKnown RBP13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 CCDC194A0A1B0GVG4 234 aa13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 CCDC12Q8WUD4 166 aaPredicted RBP13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 JAKMIP1Q96N16 626 aaKnown RBP13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 CNTLNQ9NXG0 1405 aa13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 MAP3K12Q12852 859 aa13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 ARHGAP27Q6ZUM4 889 aa13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 USHBP1Q8N6Y0 703 aa13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 PRPF4BQ13523 1007 aaKnown RBP13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 CFAP58Q5T655 872 aa13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 NAPBQ9H115 298 aa13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 PPP2R5CQ13362 524 aa13.85□□□□□ -0.19
SLC6A6-204ENST00000613060 PPFIA1Q13136 1202 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 SLC5A1P13866 664 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 PAFAH1B1P43034 410 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 SATB1Q01826 763 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 C6orf163Q5TEZ5 329 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 TMCO3Q6UWJ1 677 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 DDX12PQ92771 950 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 PPP1R9BQ96SB3 815 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 RNF41Q9H4P4 317 aaPredicted RBP13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 LDHCP07864 332 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 IKBKGQ9Y6K9 419 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 PPP1R12AO14974 1030 aaPredicted RBP13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 RASA3Q14644 834 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 RNF169Q8NCN4 708 aa13.84□□□□□ -0.19
SLC6A6-204ENST00000613060 SMARCA2P51531 1590 aa13.83□□□□□ -0.19
SLC6A6-204ENST00000613060 PICK1Q9NRD5 415 aa13.83□□□□□ -0.19
SLC6A6-204ENST00000613060 ZSCAN12O43309 604 aa13.83□□□□□ -0.2
SLC6A6-204ENST00000613060 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
SLC6A6-204ENST00000613060 MAP10Q9P2G4 905 aa13.83□□□□□ -0.2
SLC6A6-204ENST00000613060 MYD88Q99836 296 aa13.83□□□□□ -0.2
SLC6A6-204ENST00000613060 PKD2L1Q9P0L9 805 aa13.83□□□□□ -0.2
SLC6A6-204ENST00000613060 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
SLC6A6-204ENST00000613060 CACYBPQ9HB71 228 aaKnown RBP13.83□□□□□ -0.2
SLC6A6-204ENST00000613060 A0A087WZG4 1122 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 NBPF3Q9H094 633 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 KIF5CO60282 957 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 AMPD3Q01432 767 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 BRDTQ58F21 947 aaPredicted RBP13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 KLHL10Q6JEL2 608 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 UBXN4Q92575 508 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 TMOD4Q9NZQ9 345 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 HARSP12081 509 aaKnown RBP13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 CCDC7Q96M83 1385 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 KIF4AO95239 1232 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 EIF6P56537 245 aaKnown RBP13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 CFAP70Q5T0N1 1121 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 USP37Q86T82 979 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 FILIP1Q7Z7B0 1213 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 CALML4Q96GE6 196 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 CLSTN2Q9H4D0 955 aa13.82□□□□□ -0.2
SLC6A6-204ENST00000613060 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 NAA15Q9BXJ9 866 aaKnown RBP13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 FYCO1Q9BQS8 1478 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 POGZQ7Z3K3 1410 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 B4DLN1 442 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 CRCPO75575 148 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 MRPL12P52815 198 aaKnown RBP13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 SPECC1Q5M775 1068 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 CWC27Q6UX04 472 aaKnown RBP13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 NOB1Q9ULX3 412 aaKnown RBP13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 KIF2AO00139 706 aaPredicted RBP13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 CCDC83Q8IWF9 413 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 CCDC63Q8NA47 563 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 GSDMBQ8TAX9 411 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 TRIM6Q9C030 488 aaPredicted RBP13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 STX6O43752 255 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 TRAF1Q13077 416 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 C4orf50Q6ZRC1 276 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 MICALL1Q8N3F8 863 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 SETDB2Q96T68 719 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 PPME1Q9Y570 386 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 ATP6V1AP38606 617 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 PDZRN3Q9UPQ7 1066 aa13.81□□□□□ -0.2
SLC6A6-204ENST00000613060 M0QZ92 97 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 CALM1P0DP23 149 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 CALM2P0DP24 149 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 CALM3P0DP25 149 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 CCDC40Q4G0X9 1142 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 LRRC27Q9C0I9 530 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 YEATS4O95619 227 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 SPDYE16A6NNV3 312 aaPredicted RBP13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 TPD52P55327 224 aaPredicted RBP13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 GTPBP4Q9BZE4 634 aaKnown RBP13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 SYNDIG1Q9H7V2 258 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 RSPH3Q86UC2 560 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 TTC36A6NLP5 189 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 MICALCLQ6ZW33 695 aa13.8□□□□□ -0.2
SLC6A6-204ENST00000613060 BCS1LQ9Y276 419 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms