RNA–Protein interactions for RNA: ENST00000612956.4

MYCBP2-212, Transcript of MYC binding protein 2, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene MYCBP2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP2-212ENST00000612956 NHSL1Q5SYE7 1610 aa8.67□□□□□ -1.02
MYCBP2-212ENST00000612956 SIPA1L3O60292 1781 aaPredicted RBP8.67□□□□□ -1.02
MYCBP2-212ENST00000612956 HDAC1Q13547 482 aaPredicted RBP8.67□□□□□ -1.02
MYCBP2-212ENST00000612956 TSPYL6Q8N831 410 aa8.67□□□□□ -1.02
MYCBP2-212ENST00000612956 JCADQ9P266 1359 aa8.67□□□□□ -1.02
MYCBP2-212ENST00000612956 TAF7Q15545 349 aaPredicted RBP8.66□□□□□ -1.02
MYCBP2-212ENST00000612956 NBPF6Q5VWK0 638 aa8.66□□□□□ -1.02
MYCBP2-212ENST00000612956 TMEM57Q8N5G2 664 aa8.66□□□□□ -1.02
MYCBP2-212ENST00000612956 LTV1Q96GA3 475 aaPredicted RBP8.66□□□□□ -1.02
MYCBP2-212ENST00000612956 NBPF4Q96M43 638 aa8.66□□□□□ -1.02
MYCBP2-212ENST00000612956 TNNQ9UQP3 1299 aa8.66□□□□□ -1.02
MYCBP2-212ENST00000612956 SCN11AQ9UI33 1791 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 SOWAHBA6NEL2 793 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 IGHDP01880 384 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 PDE4AP27815 886 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 KCNC4Q03721 635 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 AKAP4Q5JQC9 854 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 ITPRIPQ8IWB1 547 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 ANKRD24Q8TF21 1146 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 BACH2Q9BYV9 841 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 ZBTB40Q9NUA8 1239 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 TSPYL4Q9UJ04 414 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 PCDHB15Q9Y5E8 787 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 ABCA3Q99758 1704 aa8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 SOS2Q07890 1332 aaPredicted RBP8.65□□□□□ -1.02
MYCBP2-212ENST00000612956 PKD1L3Q7Z443 1732 aa8.65□□□□□ -1.03
MYCBP2-212ENST00000612956 HOXB7P09629 217 aa8.64□□□□□ -1.03
MYCBP2-212ENST00000612956 XPCQ01831 940 aaPredicted RBP8.64□□□□□ -1.03
MYCBP2-212ENST00000612956 LMOD2Q6P5Q4 547 aa8.64□□□□□ -1.03
MYCBP2-212ENST00000612956 IL17REQ8NFR9 667 aa8.64□□□□□ -1.03
MYCBP2-212ENST00000612956 INTS3Q68E01 1043 aaKnown RBP8.64□□□□□ -1.03
MYCBP2-212ENST00000612956 PAXIP1Q6ZW49 1069 aaPredicted RBP8.64□□□□□ -1.03
MYCBP2-212ENST00000612956 BRINP3Q76B58 766 aa8.64□□□□□ -1.03
MYCBP2-212ENST00000612956 SLAIN2Q9P270 581 aa8.64□□□□□ -1.03
MYCBP2-212ENST00000612956 LRP6O75581 1613 aa8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 SPATA31A6Q5VVP1 1343 aa8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 ELL2O00472 640 aaPredicted RBP8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 ZBTB7BO15156 539 aaPredicted RBP8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 BCAMP50895 628 aa8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 ZNF772Q68DY9 489 aaPredicted RBP8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 PARP4Q9UKK3 1724 aaKnown RBP8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 RGS12O14924 1447 aa8.63□□□□□ -1.03
MYCBP2-212ENST00000612956 PXDNLA1KZ92 1463 aa8.62□□□□□ -1.03
MYCBP2-212ENST00000612956 ONECUT3O60422 494 aaPredicted RBP8.62□□□□□ -1.03
MYCBP2-212ENST00000612956 C1orf141Q5JVX7 400 aa8.62□□□□□ -1.03
MYCBP2-212ENST00000612956 CCDC30Q5VVM6 783 aa8.62□□□□□ -1.03
MYCBP2-212ENST00000612956 ZNF530Q6P9A1 599 aaPredicted RBP8.62□□□□□ -1.03
MYCBP2-212ENST00000612956 USHBP1Q8N6Y0 703 aa8.62□□□□□ -1.03
MYCBP2-212ENST00000612956 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
MYCBP2-212ENST00000612956 ROBO1Q9Y6N7 1651 aa8.62□□□□□ -1.03
MYCBP2-212ENST00000612956 ZBTB7CA1YPR0 619 aa8.61□□□□□ -1.03
MYCBP2-212ENST00000612956 LRRC59Q96AG4 307 aaKnown RBP8.61□□□□□ -1.03
MYCBP2-212ENST00000612956 STK31Q9BXU1 1019 aa8.61□□□□□ -1.03
MYCBP2-212ENST00000612956 RNMTO43148 476 aaKnown RBP8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 TATP17735 454 aaPredicted RBP8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 ANP32AP39687 249 aaKnown RBP8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 CCT4P50991 539 aaKnown RBP8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 ZC3H6P61129 1189 aaKnown RBP8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 TEFQ10587 303 aa8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 PROX2Q3B8N5 592 aa8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 RAPGEF4Q8WZA2 1011 aa8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 GCC1Q96CN9 775 aa8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 ZFRQ96KR1 1074 aaKnown RBP8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 PDZRN3Q9UPQ7 1066 aa8.6□□□□□ -1.03
MYCBP2-212ENST00000612956 MAP3K9P80192 1104 aa8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 SPG7Q9UQ90 795 aa8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 COL16A1Q07092 1604 aaPredicted RBP8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 MRC1P22897 1456 aa8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 AHDC1Q5TGY3 1603 aaPredicted RBP8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 COL22A1Q8NFW1 1626 aaPredicted RBP8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 HSP90AB1P08238 724 aaKnown RBP8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 RXRBP28702 533 aa8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 RGS3P49796 1198 aa8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 EIF4A1P60842 406 aaKnown RBP8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 KRT24Q2M2I5 525 aa8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 RPAP2Q8IXW5 612 aaPredicted RBP8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 MIS18AQ9NYP9 233 aa8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 PCDHGA10Q9Y5H3 936 aa8.59□□□□□ -1.03
MYCBP2-212ENST00000612956 HEG1Q9ULI3 1381 aa8.58□□□□□ -1.04
MYCBP2-212ENST00000612956 COL9A1P20849 921 aa8.58□□□□□ -1.04
MYCBP2-212ENST00000612956 C8orf34Q49A92 452 aa8.58□□□□□ -1.04
MYCBP2-212ENST00000612956 TPRNQ4KMQ1 711 aa8.58□□□□□ -1.04
MYCBP2-212ENST00000612956 TYW1BQ6NUM6 668 aa8.58□□□□□ -1.04
MYCBP2-212ENST00000612956 TRAF7Q6Q0C0 670 aa8.58□□□□□ -1.04
MYCBP2-212ENST00000612956 DDX17Q92841 729 aaKnown RBP8.58□□□□□ -1.04
MYCBP2-212ENST00000612956 NLRP2Q9NX02 1062 aa8.58□□□□□ -1.04
MYCBP2-212ENST00000612956 WBP1LQ9NX94 342 aa8.58□□□□□ -1.04
MYCBP2-212ENST00000612956 BTBD11A6QL63 1104 aa8.57□□□□□ -1.04
MYCBP2-212ENST00000612956 NUCB1Q02818 461 aa8.57□□□□□ -1.04
MYCBP2-212ENST00000612956 IFNL2Q8IZJ0 200 aa8.57□□□□□ -1.04
MYCBP2-212ENST00000612956 SPRYD3Q8NCJ5 442 aa8.57□□□□□ -1.04
MYCBP2-212ENST00000612956 LGR6Q9HBX8 967 aa8.57□□□□□ -1.04
MYCBP2-212ENST00000612956 WDR17Q8IZU2 1322 aa8.57□□□□□ -1.04
MYCBP2-212ENST00000612956 COL5A2P05997 1499 aaPredicted RBP8.56□□□□□ -1.04
MYCBP2-212ENST00000612956 COL14A1Q05707 1796 aaKnown RBP8.56□□□□□ -1.04
MYCBP2-212ENST00000612956 MEGF6O75095 1541 aa8.56□□□□□ -1.04
MYCBP2-212ENST00000612956 GFRA3O60609 400 aa8.56□□□□□ -1.04
MYCBP2-212ENST00000612956 PHF14O94880 888 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms