RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 DDNO94850 711 aaPredicted RBP31.6■■■□□ 2.65
MMP28-203ENST00000612672 TAOK3Q9H2K8 898 aa31.6■■■□□ 2.65
MMP28-203ENST00000612672 PDZRN3Q9UPQ7 1066 aa31.6■■■□□ 2.65
MMP28-203ENST00000612672 NPC1L1Q9UHC9 1359 aa31.59■■■□□ 2.65
MMP28-203ENST00000612672 SRGNP10124 158 aa31.59■■■□□ 2.65
MMP28-203ENST00000612672 DPY19L2Q6NUT2 758 aa31.59■■■□□ 2.65
MMP28-203ENST00000612672 SETDB2Q96T68 719 aa31.58■■■□□ 2.65
MMP28-203ENST00000612672 USP16Q9Y5T5 823 aa31.58■■■□□ 2.65
MMP28-203ENST00000612672 STYK1Q6J9G0 422 aa31.57■■■□□ 2.64
MMP28-203ENST00000612672 DZIP3Q86Y13 1208 aaKnown RBP31.56■■■□□ 2.64
MMP28-203ENST00000612672 RSPH6AQ9H0K4 717 aa31.56■■■□□ 2.64
MMP28-203ENST00000612672 SCN4AP35499 1836 aa31.55■■■□□ 2.64
MMP28-203ENST00000612672 CHADLQ6NUI6 762 aa31.55■■■□□ 2.64
MMP28-203ENST00000612672 BTBD11A6QL63 1104 aa31.54■■■□□ 2.64
MMP28-203ENST00000612672 PRKAR2BP31323 418 aa31.54■■■□□ 2.64
MMP28-203ENST00000612672 C7orf43Q8WVR3 580 aa31.54■■■□□ 2.64
MMP28-203ENST00000612672 CNKSR1Q969H4 720 aa31.54■■■□□ 2.64
MMP28-203ENST00000612672 ST5P78524 1137 aa31.53■■■□□ 2.64
MMP28-203ENST00000612672 MASTLQ96GX5 879 aa31.53■■■□□ 2.64
MMP28-203ENST00000612672 MKRN1Q9UHC7 482 aaKnown RBP31.53■■■□□ 2.64
MMP28-203ENST00000612672 OLFM4Q6UX06 510 aa31.52■■■□□ 2.64
MMP28-203ENST00000612672 ADAMTSL1Q8N6G6 1762 aa31.51■■■□□ 2.64
MMP28-203ENST00000612672 CREBZFQ9NS37 354 aa31.51■■■□□ 2.63
MMP28-203ENST00000612672 NPHP1O15259 732 aa31.49■■■□□ 2.63
MMP28-203ENST00000612672 PASKQ96RG2 1323 aa31.49■■■□□ 2.63
MMP28-203ENST00000612672 ZNF541Q9H0D2 1346 aa31.49■■■□□ 2.63
MMP28-203ENST00000612672 NBPF26B4DH59 902 aa31.48■■■□□ 2.63
MMP28-203ENST00000612672 NBPF10Q6P3W6 841 aaKnown RBP31.48■■■□□ 2.63
MMP28-203ENST00000612672 NBPF15Q8N660 670 aa31.48■■■□□ 2.63
MMP28-203ENST00000612672 LAMB4A4D0S4 1761 aa31.48■■■□□ 2.63
MMP28-203ENST00000612672 MCM10Q7L590 875 aa31.47■■■□□ 2.63
MMP28-203ENST00000612672 NBPF5PQ86XG9 351 aaPredicted RBP31.47■■■□□ 2.63
MMP28-203ENST00000612672 L3MBTL3Q96JM7 780 aaPredicted RBP31.46■■■□□ 2.63
MMP28-203ENST00000612672 KLRG2A4D1S0 409 aaPredicted RBP31.45■■■□□ 2.63
MMP28-203ENST00000612672 NPM2Q86SE8 214 aaKnown RBP31.45■■■□□ 2.63
MMP28-203ENST00000612672 TAF1DQ9H5J8 278 aaPredicted RBP31.45■■■□□ 2.63
MMP28-203ENST00000612672 CNTNAP1P78357 1384 aa31.44■■■□□ 2.62
MMP28-203ENST00000612672 DCTN1Q14203 1278 aa31.44■■■□□ 2.62
MMP28-203ENST00000612672 CCDC93Q567U6 631 aa31.44■■■□□ 2.62
MMP28-203ENST00000612672 SOGA3Q5TF21 947 aa31.44■■■□□ 2.62
MMP28-203ENST00000612672 ZNF277Q9NRM2 450 aaPredicted RBP31.44■■■□□ 2.62
MMP28-203ENST00000612672 SNED1Q8TER0 1413 aa31.43■■■□□ 2.62
MMP28-203ENST00000612672 CLEC4GQ6UXB4 293 aa31.43■■■□□ 2.62
MMP28-203ENST00000612672 COL4A5P29400 1685 aa31.42■■■□□ 2.62
MMP28-203ENST00000612672 NPR1P16066 1061 aa31.42■■■□□ 2.62
MMP28-203ENST00000612672 DLG5Q8TDM6 1919 aa31.41■■■□□ 2.62
MMP28-203ENST00000612672 FAM177BA6PVY3 158 aa31.41■■■□□ 2.62
MMP28-203ENST00000612672 SNRPA1P09661 255 aaKnown RBP31.41■■■□□ 2.62
MMP28-203ENST00000612672 FKBP4Q02790 459 aaKnown RBP eCLIP31.41■■■□□ 2.62
MMP28-203ENST00000612672 LDHDQ86WU2 507 aa31.41■■■□□ 2.62
MMP28-203ENST00000612672 FOXN1O15353 648 aa31.4■■■□□ 2.62
MMP28-203ENST00000612672 HLFQ16534 295 aa31.4■■■□□ 2.62
MMP28-203ENST00000612672 NIP7Q9Y221 180 aaKnown RBP eCLIP31.4■■■□□ 2.62
MMP28-203ENST00000612672 KDM3BQ7LBC6 1761 aa31.4■■■□□ 2.62
MMP28-203ENST00000612672 NUP98P52948 1817 aa31.4■■■□□ 2.62
MMP28-203ENST00000612672 ITGBL1O95965 494 aaPredicted RBP31.39■■■□□ 2.62
MMP28-203ENST00000612672 LTBP1Q14766 1721 aa31.38■■■□□ 2.61
MMP28-203ENST00000612672 IQCA1LA6NCM1 817 aa31.38■■■□□ 2.61
MMP28-203ENST00000612672 ZNF652Q9Y2D9 606 aa31.38■■■□□ 2.61
MMP28-203ENST00000612672 ABCC12Q96J65 1359 aa31.38■■■□□ 2.61
MMP28-203ENST00000612672 SLC51AQ86UW1 340 aa31.37■■■□□ 2.61
MMP28-203ENST00000612672 EAPPQ56P03 285 aaPredicted RBP31.35■■■□□ 2.61
MMP28-203ENST00000612672 RNF123Q5XPI4 1314 aa31.34■■■□□ 2.61
MMP28-203ENST00000612672 U2AF1L5P0DN76 240 aaPredicted RBP31.34■■■□□ 2.61
MMP28-203ENST00000612672 VEGFBP49765 207 aa31.34■■■□□ 2.61
MMP28-203ENST00000612672 U2AF1Q01081 240 aaKnown RBP eCLIP31.34■■■□□ 2.61
MMP28-203ENST00000612672 CFAP53Q96M91 514 aa31.34■■■□□ 2.61
MMP28-203ENST00000612672 MIS18AQ9NYP9 233 aa31.34■■■□□ 2.61
MMP28-203ENST00000612672 PPP2R1AP30153 589 aa31.33■■■□□ 2.61
MMP28-203ENST00000612672 TPTE2Q6XPS3 522 aa31.33■■■□□ 2.61
MMP28-203ENST00000612672 RTF1Q92541 710 aaKnown RBP31.32■■■□□ 2.6
MMP28-203ENST00000612672 FZD9O00144 591 aa31.31■■■□□ 2.6
MMP28-203ENST00000612672 IARSP41252 1262 aaKnown RBP31.31■■■□□ 2.6
MMP28-203ENST00000612672 SYNE4Q8N205 404 aa31.31■■■□□ 2.6
MMP28-203ENST00000612672 HACL1Q9UJ83 578 aa31.31■■■□□ 2.6
MMP28-203ENST00000612672 TMEM88BA6NKF7 163 aa31.3■■■□□ 2.6
MMP28-203ENST00000612672 RGL2O15211 777 aa31.3■■■□□ 2.6
MMP28-203ENST00000612672 EPHX2P34913 555 aa31.3■■■□□ 2.6
MMP28-203ENST00000612672 NUTM1Q86Y26 1132 aa31.29■■■□□ 2.6
MMP28-203ENST00000612672 RTKN2Q8IZC4 609 aa31.29■■■□□ 2.6
MMP28-203ENST00000612672 MAP1SQ66K74 1059 aaPredicted RBP31.28■■■□□ 2.6
MMP28-203ENST00000612672 NUDCQ9Y266 331 aa31.28■■■□□ 2.6
MMP28-203ENST00000612672 CRY2Q49AN0 593 aa31.27■■■□□ 2.6
MMP28-203ENST00000612672 CLEC11AQ9Y240 323 aa31.26■■■□□ 2.59
MMP28-203ENST00000612672 TAF7Q15545 349 aaPredicted RBP31.25■■■□□ 2.59
MMP28-203ENST00000612672 TTLL7Q6ZT98 887 aa31.25■■■□□ 2.59
MMP28-203ENST00000612672 NGEFQ8N5V2 710 aa31.25■■■□□ 2.59
MMP28-203ENST00000612672 UBN2Q6ZU65 1347 aa31.24■■■□□ 2.59
MMP28-203ENST00000612672 HTATSF1O43719 755 aaKnown RBP31.24■■■□□ 2.59
MMP28-203ENST00000612672 PRDM10Q9NQV6 1147 aa31.24■■■□□ 2.59
MMP28-203ENST00000612672 ALDH1B1P30837 517 aa31.23■■■□□ 2.59
MMP28-203ENST00000612672 CNTROBQ8N137 903 aa31.23■■■□□ 2.59
MMP28-203ENST00000612672 PSMD1Q99460 953 aa31.23■■■□□ 2.59
MMP28-203ENST00000612672 WBP1LQ9NX94 342 aa31.23■■■□□ 2.59
MMP28-203ENST00000612672 THSD7BQ9C0I4 1608 aa31.23■■■□□ 2.59
MMP28-203ENST00000612672 FMR1Q06787 632 aaKnown RBP eCLIP31.22■■■□□ 2.59
MMP28-203ENST00000612672 GPC2Q8N158 579 aa31.22■■■□□ 2.59
MMP28-203ENST00000612672 RIC1Q4ADV7 1423 aa31.22■■■□□ 2.59
MMP28-203ENST00000612672 RASSF10A6NK89 507 aa31.21■■■□□ 2.59
MMP28-203ENST00000612672 GTF2E1P29083 439 aaPredicted RBP31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 276.3 ms