RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 H0YIN7 160 aa16.02■□□□□ 0.16
CBWD3-208ENST00000612050 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.16
CBWD3-208ENST00000612050 PDE6BP35913 854 aa16.02■□□□□ 0.16
CBWD3-208ENST00000612050 DALRD3Q5D0E6 543 aaKnown RBP16.02■□□□□ 0.16
CBWD3-208ENST00000612050 NBPF26B4DH59 902 aa16.02■□□□□ 0.15
CBWD3-208ENST00000612050 CHL1O00533 1208 aa16.02■□□□□ 0.15
CBWD3-208ENST00000612050 NBPF10Q6P3W6 841 aaKnown RBP16.02■□□□□ 0.15
CBWD3-208ENST00000612050 NBPF5PQ86XG9 351 aaPredicted RBP16.02■□□□□ 0.15
CBWD3-208ENST00000612050 NBPF15Q8N660 670 aa16.02■□□□□ 0.15
CBWD3-208ENST00000612050 NRXN2Q9P2S2 1712 aa16.01■□□□□ 0.15
CBWD3-208ENST00000612050 ERVV-1B6SEH8 477 aa16.01■□□□□ 0.15
CBWD3-208ENST00000612050 HOXB7P09629 217 aa16.01■□□□□ 0.15
CBWD3-208ENST00000612050 TPTE2Q6XPS3 522 aa16.01■□□□□ 0.15
CBWD3-208ENST00000612050 IFT57Q9NWB7 429 aa16.01■□□□□ 0.15
CBWD3-208ENST00000612050 NIP7Q9Y221 180 aaKnown RBP eCLIP16.01■□□□□ 0.15
CBWD3-208ENST00000612050 C2CD5Q86YS7 1000 aa16■□□□□ 0.15
CBWD3-208ENST00000612050 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
CBWD3-208ENST00000612050 NYXQ9GZU5 481 aa16■□□□□ 0.15
CBWD3-208ENST00000612050 MAP3K15Q6ZN16 1313 aa16■□□□□ 0.15
CBWD3-208ENST00000612050 KIAA1551Q9HCM1 1747 aa15.99■□□□□ 0.15
CBWD3-208ENST00000612050 ARHGAP27Q6ZUM4 889 aa15.99■□□□□ 0.15
CBWD3-208ENST00000612050 CHRNA5P30532 468 aa15.98■□□□□ 0.15
CBWD3-208ENST00000612050 HDGFL1Q5TGJ6 251 aa15.98■□□□□ 0.15
CBWD3-208ENST00000612050 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
CBWD3-208ENST00000612050 BRCA1P38398 1863 aaKnown RBP15.98■□□□□ 0.15
CBWD3-208ENST00000612050 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
CBWD3-208ENST00000612050 PRR5LQ6MZQ0 368 aa15.97■□□□□ 0.15
CBWD3-208ENST00000612050 TTLL6Q8N841 843 aa15.97■□□□□ 0.15
CBWD3-208ENST00000612050 CCDC27Q2M243 656 aa15.96■□□□□ 0.15
CBWD3-208ENST00000612050 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
CBWD3-208ENST00000612050 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
CBWD3-208ENST00000612050 NECTIN2Q92692 538 aa15.96■□□□□ 0.15
CBWD3-208ENST00000612050 ZNF622Q969S3 477 aaKnown RBP eCLIP15.96■□□□□ 0.15
CBWD3-208ENST00000612050 ZBTB3Q9H5J0 574 aa15.96■□□□□ 0.15
CBWD3-208ENST00000612050 DDX21Q9NR30 783 aaKnown RBP eCLIP15.96■□□□□ 0.15
CBWD3-208ENST00000612050 MBIPQ9NS73 344 aa15.96■□□□□ 0.15
CBWD3-208ENST00000612050 DBF4Q9UBU7 674 aaPredicted RBP15.96■□□□□ 0.15
CBWD3-208ENST00000612050 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
CBWD3-208ENST00000612050 NUP98P52948 1817 aa15.95■□□□□ 0.14
CBWD3-208ENST00000612050 DLEC1Q9Y238 1755 aa15.95■□□□□ 0.14
CBWD3-208ENST00000612050 KCNA3P22001 575 aa15.94■□□□□ 0.14
CBWD3-208ENST00000612050 DUSP27Q5VZP5 1158 aa15.94■□□□□ 0.14
CBWD3-208ENST00000612050 GIGYF2Q6Y7W6 1299 aaKnown RBP15.94■□□□□ 0.14
CBWD3-208ENST00000612050 PPP1R42Q7Z4L9 355 aa15.94■□□□□ 0.14
CBWD3-208ENST00000612050 ZNF784Q8NCA9 323 aaPredicted RBP15.94■□□□□ 0.14
CBWD3-208ENST00000612050 CNKSR1Q969H4 720 aa15.94■□□□□ 0.14
CBWD3-208ENST00000612050 AIMP1Q12904 312 aaKnown RBP15.94■□□□□ 0.14
CBWD3-208ENST00000612050 HLFQ16534 295 aa15.94■□□□□ 0.14
CBWD3-208ENST00000612050 PARP10Q53GL7 1025 aa15.94■□□□□ 0.14
CBWD3-208ENST00000612050 TTLL7Q6ZT98 887 aa15.94■□□□□ 0.14
CBWD3-208ENST00000612050 HYPKQ9NX55 129 aa15.94■□□□□ 0.14
CBWD3-208ENST00000612050 ATP10DQ9P241 1426 aa15.93■□□□□ 0.14
CBWD3-208ENST00000612050 SOGA3Q5TF21 947 aa15.93■□□□□ 0.14
CBWD3-208ENST00000612050 MASTLQ96GX5 879 aa15.93■□□□□ 0.14
CBWD3-208ENST00000612050 ZNF853P0CG23 659 aa15.92■□□□□ 0.14
CBWD3-208ENST00000612050 GPTP24298 496 aa15.92■□□□□ 0.14
CBWD3-208ENST00000612050 STYK1Q6J9G0 422 aa15.92■□□□□ 0.14
CBWD3-208ENST00000612050 COPS6Q7L5N1 327 aa15.92■□□□□ 0.14
CBWD3-208ENST00000612050 WWC1Q8IX03 1113 aa15.92■□□□□ 0.14
CBWD3-208ENST00000612050 CCDC24Q8N4L8 307 aa15.92■□□□□ 0.14
CBWD3-208ENST00000612050 CHPF2Q9P2E5 772 aa15.92■□□□□ 0.14
CBWD3-208ENST00000612050 IBTKQ9P2D0 1353 aaPredicted RBP15.91■□□□□ 0.14
CBWD3-208ENST00000612050 IL16Q14005 1332 aa15.91■□□□□ 0.14
CBWD3-208ENST00000612050 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
CBWD3-208ENST00000612050 KRT24Q2M2I5 525 aa15.91■□□□□ 0.14
CBWD3-208ENST00000612050 CCDC30Q5VVM6 783 aa15.91■□□□□ 0.14
CBWD3-208ENST00000612050 XAGE3Q8WTP9 111 aa15.91■□□□□ 0.14
CBWD3-208ENST00000612050 STK31Q9BXU1 1019 aa15.91■□□□□ 0.14
CBWD3-208ENST00000612050 ANXA1P04083 346 aa15.9■□□□□ 0.14
CBWD3-208ENST00000612050 NPR1P16066 1061 aa15.9■□□□□ 0.14
CBWD3-208ENST00000612050 GOLGA2Q08379 1002 aa15.9■□□□□ 0.14
CBWD3-208ENST00000612050 PDIA6Q15084 440 aa15.9■□□□□ 0.14
CBWD3-208ENST00000612050 GPBP1L1Q9HC44 474 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-208ENST00000612050 SALL2Q9Y467 1007 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-208ENST00000612050 RNF123Q5XPI4 1314 aa15.89■□□□□ 0.13
CBWD3-208ENST00000612050 ELL2O00472 640 aaPredicted RBP15.89■□□□□ 0.13
CBWD3-208ENST00000612050 DDX58O95786 925 aaKnown RBP15.89■□□□□ 0.13
CBWD3-208ENST00000612050 SRGNP10124 158 aa15.89■□□□□ 0.13
CBWD3-208ENST00000612050 ALDH1B1P30837 517 aa15.89■□□□□ 0.13
CBWD3-208ENST00000612050 WDR63Q8IWG1 891 aa15.89■□□□□ 0.13
CBWD3-208ENST00000612050 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
CBWD3-208ENST00000612050 TMX4Q9H1E5 349 aaPredicted RBP15.89■□□□□ 0.13
CBWD3-208ENST00000612050 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
CBWD3-208ENST00000612050 ANKRD13DQ6ZTN6 518 aa15.88■□□□□ 0.13
CBWD3-208ENST00000612050 ZNF34Q8IZ26 560 aa15.88■□□□□ 0.13
CBWD3-208ENST00000612050 PLBD2Q8NHP8 589 aa15.88■□□□□ 0.13
CBWD3-208ENST00000612050 UTP14AQ9BVJ6 771 aaKnown RBP15.88■□□□□ 0.13
CBWD3-208ENST00000612050 ANKRD36CQ5JPF3 1778 aa15.88■□□□□ 0.13
CBWD3-208ENST00000612050 CACNA1SQ13698 1873 aa15.87■□□□□ 0.13
CBWD3-208ENST00000612050 RIC3Q7Z5B4 369 aa15.87■□□□□ 0.13
CBWD3-208ENST00000612050 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
CBWD3-208ENST00000612050 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
CBWD3-208ENST00000612050 COL11A2P13942 1736 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-208ENST00000612050 TCIRG1Q13488 830 aa15.86■□□□□ 0.13
CBWD3-208ENST00000612050 C9orf131Q5VYM1 1079 aa15.86■□□□□ 0.13
CBWD3-208ENST00000612050 NUTM1Q86Y26 1132 aa15.86■□□□□ 0.13
CBWD3-208ENST00000612050 ZNF526Q8TF50 670 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-208ENST00000612050 NLRP3Q96P20 1036 aa15.86■□□□□ 0.13
CBWD3-208ENST00000612050 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-208ENST00000612050 ARFGEF2Q9Y6D5 1785 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms