RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 IL6STP40189 918 aaPredicted RBP11.09□□□□□ -0.63
FAM228B-206ENST00000611138 CCDC30Q5VVM6 783 aa11.09□□□□□ -0.63
FAM228B-206ENST00000611138 ARXQ96QS3 562 aa11.09□□□□□ -0.63
FAM228B-206ENST00000611138 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
FAM228B-206ENST00000611138 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
FAM228B-206ENST00000611138 SSFA2P28290 1259 aa11.08□□□□□ -0.64
FAM228B-206ENST00000611138 PDIA6Q15084 440 aa11.08□□□□□ -0.64
FAM228B-206ENST00000611138 NPM2Q86SE8 214 aaKnown RBP11.08□□□□□ -0.64
FAM228B-206ENST00000611138 STK31Q9BXU1 1019 aa11.08□□□□□ -0.64
FAM228B-206ENST00000611138 PDGFDQ9GZP0 370 aaPredicted RBP11.08□□□□□ -0.64
FAM228B-206ENST00000611138 DDX21Q9NR30 783 aaKnown RBP eCLIP11.08□□□□□ -0.64
FAM228B-206ENST00000611138 COL24A1Q17RW2 1714 aa11.07□□□□□ -0.64
FAM228B-206ENST00000611138 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
FAM228B-206ENST00000611138 EIF5P55010 431 aaKnown RBP11.07□□□□□ -0.64
FAM228B-206ENST00000611138 TRAPPC3LQ5T215 181 aa11.07□□□□□ -0.64
FAM228B-206ENST00000611138 COL23A1Q86Y22 540 aaPredicted RBP11.07□□□□□ -0.64
FAM228B-206ENST00000611138 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
FAM228B-206ENST00000611138 BCL2L13Q9BXK5 485 aa11.07□□□□□ -0.64
FAM228B-206ENST00000611138 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
FAM228B-206ENST00000611138 N4BP2Q86UW6 1770 aaPredicted RBP11.06□□□□□ -0.64
FAM228B-206ENST00000611138 RFC4P35249 363 aa11.06□□□□□ -0.64
FAM228B-206ENST00000611138 AIMP1Q12904 312 aaKnown RBP11.06□□□□□ -0.64
FAM228B-206ENST00000611138 TTLL7Q6ZT98 887 aa11.06□□□□□ -0.64
FAM228B-206ENST00000611138 FLAD1Q8NFF5 587 aa11.06□□□□□ -0.64
FAM228B-206ENST00000611138 XAGE3Q8WTP9 111 aa11.06□□□□□ -0.64
FAM228B-206ENST00000611138 ARHGEF1Q92888 912 aaKnown RBP11.06□□□□□ -0.64
FAM228B-206ENST00000611138 CHMP4AQ9BY43 222 aa11.06□□□□□ -0.64
FAM228B-206ENST00000611138 SRP68Q9UHB9 627 aaKnown RBP11.06□□□□□ -0.64
FAM228B-206ENST00000611138 TBC1D2BQ9UPU7 963 aa11.06□□□□□ -0.64
FAM228B-206ENST00000611138 A0A087WZG4 1122 aa11.05□□□□□ -0.64
FAM228B-206ENST00000611138 CT47B1P0C2W7 299 aaPredicted RBP11.05□□□□□ -0.64
FAM228B-206ENST00000611138 KIF6Q6ZMV9 814 aa11.05□□□□□ -0.64
FAM228B-206ENST00000611138 G2E3Q7L622 706 aa11.05□□□□□ -0.64
FAM228B-206ENST00000611138 LRP10Q7Z4F1 713 aa11.05□□□□□ -0.64
FAM228B-206ENST00000611138 DZIP3Q86Y13 1208 aaKnown RBP11.05□□□□□ -0.64
FAM228B-206ENST00000611138 SSH1Q8WYL5 1049 aa11.05□□□□□ -0.64
FAM228B-206ENST00000611138 PHAXQ9H814 394 aaKnown RBP11.05□□□□□ -0.64
FAM228B-206ENST00000611138 SMC4Q9NTJ3 1288 aa11.05□□□□□ -0.64
FAM228B-206ENST00000611138 HYPKQ9NX55 129 aa11.05□□□□□ -0.64
FAM228B-206ENST00000611138 USP42Q9H9J4 1324 aaKnown RBP11.05□□□□□ -0.64
FAM228B-206ENST00000611138 ZPR1O75312 459 aa11.04□□□□□ -0.64
FAM228B-206ENST00000611138 USPL1Q5W0Q7 1092 aa11.04□□□□□ -0.64
FAM228B-206ENST00000611138 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
FAM228B-206ENST00000611138 COPS6Q7L5N1 327 aa11.04□□□□□ -0.64
FAM228B-206ENST00000611138 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
FAM228B-206ENST00000611138 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
FAM228B-206ENST00000611138 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
FAM228B-206ENST00000611138 CAMTA2O94983 1202 aa11.03□□□□□ -0.64
FAM228B-206ENST00000611138 ZBTB7AO95365 584 aa11.03□□□□□ -0.64
FAM228B-206ENST00000611138 RARSP54136 660 aaKnown RBP11.03□□□□□ -0.64
FAM228B-206ENST00000611138 FLIIQ13045 1269 aa11.03□□□□□ -0.64
FAM228B-206ENST00000611138 ALDH1L2Q3SY69 923 aa11.03□□□□□ -0.64
FAM228B-206ENST00000611138 MRPL50Q8N5N7 158 aaKnown RBP11.03□□□□□ -0.64
FAM228B-206ENST00000611138 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
FAM228B-206ENST00000611138 MAP3K15Q6ZN16 1313 aa11.03□□□□□ -0.64
FAM228B-206ENST00000611138 GYS1P13807 737 aa11.02□□□□□ -0.65
FAM228B-206ENST00000611138 FKBP5Q13451 457 aaPredicted RBP11.02□□□□□ -0.65
FAM228B-206ENST00000611138 BCAR3O75815 825 aa11.01□□□□□ -0.65
FAM228B-206ENST00000611138 DDX58O95786 925 aaKnown RBP11.01□□□□□ -0.65
FAM228B-206ENST00000611138 FKBP8Q14318 412 aa11.01□□□□□ -0.65
FAM228B-206ENST00000611138 HLFQ16534 295 aa11.01□□□□□ -0.65
FAM228B-206ENST00000611138 RIC3Q7Z5B4 369 aa11.01□□□□□ -0.65
FAM228B-206ENST00000611138 BCL2L12Q9HB09 334 aa11.01□□□□□ -0.65
FAM228B-206ENST00000611138 ADCY9O60503 1353 aa11.01□□□□□ -0.65
FAM228B-206ENST00000611138 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
FAM228B-206ENST00000611138 LAMB2P55268 1798 aa11□□□□□ -0.65
FAM228B-206ENST00000611138 BICDL1Q6ZP65 573 aa11□□□□□ -0.65
FAM228B-206ENST00000611138 ANKRD13DQ6ZTN6 518 aa11□□□□□ -0.65
FAM228B-206ENST00000611138 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
FAM228B-206ENST00000611138 PLBD2Q8NHP8 589 aa11□□□□□ -0.65
FAM228B-206ENST00000611138 SLC16A10Q8TF71 515 aa11□□□□□ -0.65
FAM228B-206ENST00000611138 RCAN3Q9UKA8 241 aa11□□□□□ -0.65
FAM228B-206ENST00000611138 ATF5Q9Y2D1 282 aaPredicted RBP11□□□□□ -0.65
FAM228B-206ENST00000611138 ZNF652Q9Y2D9 606 aa11□□□□□ -0.65
FAM228B-206ENST00000611138 ANKRD31Q8N7Z5 1873 aa11□□□□□ -0.65
FAM228B-206ENST00000611138 DDX60Q8IY21 1712 aaKnown RBP10.99□□□□□ -0.65
FAM228B-206ENST00000611138 PI4KAP2A4QPH2 592 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 ERVV-1B6SEH8 477 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 GPTP24298 496 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 TBC1D9BQ66K14 1250 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 PI4KAP1Q8N8J0 262 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 FRAT1Q92837 279 aaPredicted RBP10.99□□□□□ -0.65
FAM228B-206ENST00000611138 MTFR1LQ9H019 292 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 NOB1Q9ULX3 412 aaKnown RBP10.99□□□□□ -0.65
FAM228B-206ENST00000611138 MAP3K2Q9Y2U5 619 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 KIF16BQ96L93 1317 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 CACNA1SQ13698 1873 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 ATP10DQ9P241 1426 aa10.99□□□□□ -0.65
FAM228B-206ENST00000611138 LRP5O75197 1615 aa10.98□□□□□ -0.65
FAM228B-206ENST00000611138 KIF13BQ9NQT8 1826 aa10.98□□□□□ -0.65
FAM228B-206ENST00000611138 F6X3S4 739 aa10.98□□□□□ -0.65
FAM228B-206ENST00000611138 KSR2Q6VAB6 950 aa10.98□□□□□ -0.65
FAM228B-206ENST00000611138 GIGYF2Q6Y7W6 1299 aaKnown RBP10.98□□□□□ -0.65
FAM228B-206ENST00000611138 NLGN1Q8N2Q7 840 aa10.98□□□□□ -0.65
FAM228B-206ENST00000611138 MYD88Q99836 296 aa10.98□□□□□ -0.65
FAM228B-206ENST00000611138 NIP7Q9Y221 180 aaKnown RBP eCLIP10.98□□□□□ -0.65
FAM228B-206ENST00000611138 PTPRCP08575 1304 aa10.98□□□□□ -0.65
FAM228B-206ENST00000611138 PXDNLA1KZ92 1463 aa10.98□□□□□ -0.65
FAM228B-206ENST00000611138 TNRC6CQ9HCJ0 1690 aaKnown RBP10.98□□□□□ -0.65
FAM228B-206ENST00000611138 MYH3P11055 1940 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms