RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 NME9Q86XW9 330 aa10.59□□□□□ -0.71
COL25A1-208ENST00000610288 ARFGAP3Q9NP61 516 aa10.59□□□□□ -0.71
COL25A1-208ENST00000610288 TFIP11Q9UBB9 837 aaKnown RBP10.59□□□□□ -0.71
COL25A1-208ENST00000610288 BIVM-ERCC5R4GMW8 1640 aa10.59□□□□□ -0.71
COL25A1-208ENST00000610288 RLBP1P12271 317 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 LIG1P18858 919 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 CDK5RAP3Q96JB5 506 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 LRRFIP2Q9Y608 721 aaKnown RBP10.58□□□□□ -0.72
COL25A1-208ENST00000610288 POLR3AO14802 1390 aaPredicted RBP10.58□□□□□ -0.72
COL25A1-208ENST00000610288 C10orf67Q8IYJ2 551 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 FSIP1Q8NA03 581 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 SMARCC1Q92922 1105 aaPredicted RBP10.58□□□□□ -0.72
COL25A1-208ENST00000610288 PPP1R9BQ96SB3 815 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 EMILIN1Q9Y6C2 1016 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 CCDC69A6NI79 296 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 SETSIPP0DME0 302 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 TICAM2Q86XR7 235 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 CNPY2Q9Y2B0 182 aa10.58□□□□□ -0.72
COL25A1-208ENST00000610288 THOC2Q8NI27 1593 aaKnown RBP10.57□□□□□ -0.72
COL25A1-208ENST00000610288 NUP160Q12769 1436 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 V9GYY5 206 aaPredicted RBP10.57□□□□□ -0.72
COL25A1-208ENST00000610288 ZMYM3Q14202 1370 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 ANKRD44Q8N8A2 993 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 NUP133Q8WUM0 1156 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 ZSCAN16Q9H4T2 348 aaPredicted RBP10.57□□□□□ -0.72
COL25A1-208ENST00000610288 ZNF500O60304 480 aaPredicted RBP10.57□□□□□ -0.72
COL25A1-208ENST00000610288 DMRT2Q9Y5R5 561 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 U3KPZ7 1027 aaPredicted RBP10.57□□□□□ -0.72
COL25A1-208ENST00000610288 PER1O15534 1290 aaPredicted RBP10.57□□□□□ -0.72
COL25A1-208ENST00000610288 IGSF3O75054 1194 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 IMMTQ16891 758 aaKnown RBP10.57□□□□□ -0.72
COL25A1-208ENST00000610288 ANO6Q4KMQ2 910 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 WASF1Q92558 559 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 CCDC85AQ96PX6 553 aaPredicted RBP10.57□□□□□ -0.72
COL25A1-208ENST00000610288 ESYT1Q9BSJ8 1104 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 ZBTB40Q9NUA8 1239 aa10.57□□□□□ -0.72
COL25A1-208ENST00000610288 F13A1P00488 732 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 ZMYM4Q5VZL5 1548 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 GBP6Q6ZN66 633 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 LUZP1Q86V48 1076 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 NGLY1Q96IV0 654 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 TAF7Q15545 349 aaPredicted RBP10.56□□□□□ -0.72
COL25A1-208ENST00000610288 ODF2Q5BJF6 829 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 CCAR1Q8IX12 1150 aaKnown RBP10.56□□□□□ -0.72
COL25A1-208ENST00000610288 UGGT2Q9NYU1 1516 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 FSD2A1L4K1 749 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 PDE1AP54750 535 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 GNG11P61952 73 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 C8orf76Q96K31 380 aa10.56□□□□□ -0.72
COL25A1-208ENST00000610288 F6X3S4 739 aa10.55□□□□□ -0.72
COL25A1-208ENST00000610288 GBP2P32456 591 aaPredicted RBP10.55□□□□□ -0.72
COL25A1-208ENST00000610288 ATP2B2Q01814 1243 aa10.55□□□□□ -0.72
COL25A1-208ENST00000610288 TYRO3Q06418 890 aa10.55□□□□□ -0.72
COL25A1-208ENST00000610288 IDI1Q13907 227 aa10.55□□□□□ -0.72
COL25A1-208ENST00000610288 CEP131Q9UPN4 1083 aa10.55□□□□□ -0.72
COL25A1-208ENST00000610288 TMCO5BA8MYB1 307 aa10.55□□□□□ -0.72
COL25A1-208ENST00000610288 KRT18P05783 430 aaKnown RBP10.55□□□□□ -0.72
COL25A1-208ENST00000610288 ZGPATQ8N5A5 531 aaKnown RBP10.55□□□□□ -0.72
COL25A1-208ENST00000610288 PRAG1Q86YV5 1406 aa10.55□□□□□ -0.72
COL25A1-208ENST00000610288 NPHP3Q7Z494 1330 aa10.55□□□□□ -0.72
COL25A1-208ENST00000610288 A0A1B0GUA9 196 aa10.55□□□□□ -0.72
COL25A1-208ENST00000610288 GOLIM4O00461 696 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 IDH1O75874 414 aaKnown RBP10.54□□□□□ -0.72
COL25A1-208ENST00000610288 PTGS1P23219 599 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 FBXO31Q5XUX0 539 aaPredicted RBP10.54□□□□□ -0.72
COL25A1-208ENST00000610288 EVI5LQ96CN4 794 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 DACT1Q9NYF0 836 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 UBAP1LF5GYI3 381 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 ZFYVE27Q5T4F4 411 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 LARP1Q6PKG0 1096 aaKnown RBP10.54□□□□□ -0.72
COL25A1-208ENST00000610288 UBAC1Q9BSL1 405 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 EFCC1Q9HA90 598 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 ECHDC1Q9NTX5 307 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 FOXO3O43524 673 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 EIF5P55010 431 aaKnown RBP10.54□□□□□ -0.72
COL25A1-208ENST00000610288 HSP90AB2PQ58FF8 381 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 ERO1AQ96HE7 468 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 DCTPP1Q9H773 170 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 HMG20BQ9P0W2 317 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 DNAI1Q9UI46 699 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 TNNQ9UQP3 1299 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 ARHGEF12Q9NZN5 1544 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 MPHOSPH10O00566 681 aaKnown RBP10.54□□□□□ -0.72
COL25A1-208ENST00000610288 PTCD1O75127 700 aaKnown RBP10.54□□□□□ -0.72
COL25A1-208ENST00000610288 EZRP15311 586 aaKnown RBP10.54□□□□□ -0.72
COL25A1-208ENST00000610288 USHBP1Q8N6Y0 703 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 TESK2Q96S53 571 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 USP26Q9BXU7 913 aa10.54□□□□□ -0.72
COL25A1-208ENST00000610288 WASLO00401 505 aaPredicted RBP10.53□□□□□ -0.72
COL25A1-208ENST00000610288 TUBB4BP68371 445 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 LARP6Q9BRS8 491 aaKnown RBP10.53□□□□□ -0.72
COL25A1-208ENST00000610288 RSPH14Q9UHP6 348 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 ZNF526Q8TF50 670 aaPredicted RBP10.53□□□□□ -0.72
COL25A1-208ENST00000610288 BOLA2Q9H3K6 86 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 MBIPQ9NS73 344 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 RAI14Q9P0K7 980 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 ANKRD36BQ8N2N9 1353 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 ADGRL1O94910 1474 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms