RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 GDPD2Q9HCC8 539 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 ABCC3O15438 1527 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 ZSCAN22P10073 491 aaPredicted RBP16.84■□□□□ 0.29
LINC02538-201ENST00000609107 ANKRD13DQ6ZTN6 518 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 MPHOSPH8Q99549 860 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 RRP12Q5JTH9 1297 aaKnown RBP16.83■□□□□ 0.29
LINC02538-201ENST00000609107 RBM27Q9P2N5 1060 aaKnown RBP16.83■□□□□ 0.29
LINC02538-201ENST00000609107 MCM5P33992 734 aa16.83■□□□□ 0.28
LINC02538-201ENST00000609107 HOXB7P09629 217 aa16.83■□□□□ 0.28
LINC02538-201ENST00000609107 KCNA6P17658 529 aa16.83■□□□□ 0.28
LINC02538-201ENST00000609107 CCAR2Q8N163 923 aaKnown RBP16.83■□□□□ 0.28
LINC02538-201ENST00000609107 UBE3BQ7Z3V4 1068 aa16.82■□□□□ 0.28
LINC02538-201ENST00000609107 LARP6Q9BRS8 491 aaKnown RBP16.82■□□□□ 0.28
LINC02538-201ENST00000609107 UVSSAQ2YD98 709 aa16.82■□□□□ 0.28
LINC02538-201ENST00000609107 GOLGA6L1Q8N7Z2 621 aa16.82■□□□□ 0.28
LINC02538-201ENST00000609107 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
LINC02538-201ENST00000609107 IPO7O95373 1038 aaKnown RBP16.82■□□□□ 0.28
LINC02538-201ENST00000609107 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
LINC02538-201ENST00000609107 METTL24Q5JXM2 366 aa16.82■□□□□ 0.28
LINC02538-201ENST00000609107 TMOD3Q9NYL9 352 aa16.82■□□□□ 0.28
LINC02538-201ENST00000609107 CCP110O43303 1012 aa16.82■□□□□ 0.28
LINC02538-201ENST00000609107 CCDC69A6NI79 296 aa16.81■□□□□ 0.28
LINC02538-201ENST00000609107 PANK2Q9BZ23 570 aa16.81■□□□□ 0.28
LINC02538-201ENST00000609107 DDX19AQ9NUU7 478 aaKnown RBP16.81■□□□□ 0.28
LINC02538-201ENST00000609107 MNS1Q8NEH6 495 aa16.81■□□□□ 0.28
LINC02538-201ENST00000609107 AOX1Q06278 1338 aa16.81■□□□□ 0.28
LINC02538-201ENST00000609107 KDM4AO75164 1064 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 CLCN1P35523 988 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 ZMYND15Q9H091 742 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 CWC25Q9NXE8 425 aaPredicted RBP16.8■□□□□ 0.28
LINC02538-201ENST00000609107 RNF17Q9BXT8 1623 aaKnown RBP16.8■□□□□ 0.28
LINC02538-201ENST00000609107 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 UQCRHLA0A096LP55 91 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 UQCRHP07919 91 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 SLC3A2P08195 630 aaKnown RBP16.8■□□□□ 0.28
LINC02538-201ENST00000609107 XAGE3Q8WTP9 111 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 NEK1Q96PY6 1258 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 ATP2B1P20020 1258 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 CAMK4Q16566 473 aa16.8■□□□□ 0.28
LINC02538-201ENST00000609107 CCDC85AQ96PX6 553 aaPredicted RBP16.8■□□□□ 0.28
LINC02538-201ENST00000609107 PHAXQ9H814 394 aaKnown RBP16.8■□□□□ 0.28
LINC02538-201ENST00000609107 RBM8AQ9Y5S9 174 aaKnown RBP16.8■□□□□ 0.28
LINC02538-201ENST00000609107 IFIT5Q13325 482 aaKnown RBP16.79■□□□□ 0.28
LINC02538-201ENST00000609107 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
LINC02538-201ENST00000609107 LRRC59Q96AG4 307 aaKnown RBP16.79■□□□□ 0.28
LINC02538-201ENST00000609107 ARGLU1Q9NWB6 273 aaPredicted RBP16.79■□□□□ 0.28
LINC02538-201ENST00000609107 IDH1O75874 414 aaKnown RBP16.79■□□□□ 0.28
LINC02538-201ENST00000609107 HSP90AB3PQ58FF7 597 aa16.79■□□□□ 0.28
LINC02538-201ENST00000609107 COPS6Q7L5N1 327 aa16.79■□□□□ 0.28
LINC02538-201ENST00000609107 GPS2Q13227 327 aa16.79■□□□□ 0.28
LINC02538-201ENST00000609107 ATP5J2-PTCD1G3V325 749 aa16.79■□□□□ 0.28
LINC02538-201ENST00000609107 CTAGE5O15320 804 aa16.78■□□□□ 0.28
LINC02538-201ENST00000609107 RRP9O43818 475 aaKnown RBP16.78■□□□□ 0.28
LINC02538-201ENST00000609107 CADPS2Q86UW7 1296 aa16.78■□□□□ 0.28
LINC02538-201ENST00000609107 USP25Q9UHP3 1055 aa16.78■□□□□ 0.28
LINC02538-201ENST00000609107 GCP02774 474 aa16.78■□□□□ 0.28
LINC02538-201ENST00000609107 WASF1Q92558 559 aa16.78■□□□□ 0.28
LINC02538-201ENST00000609107 PDE4CQ08493 712 aa16.78■□□□□ 0.28
LINC02538-201ENST00000609107 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
LINC02538-201ENST00000609107 E9PCH4 1651 aa16.78■□□□□ 0.28
LINC02538-201ENST00000609107 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
LINC02538-201ENST00000609107 RBM10P98175 930 aaKnown RBP16.77■□□□□ 0.28
LINC02538-201ENST00000609107 PDILTQ8N807 584 aa16.77■□□□□ 0.28
LINC02538-201ENST00000609107 GOLIM4O00461 696 aa16.77■□□□□ 0.28
LINC02538-201ENST00000609107 TEX13AQ9BXU3 409 aaPredicted RBP16.77■□□□□ 0.28
LINC02538-201ENST00000609107 DACH1Q9UI36 760 aa16.77■□□□□ 0.28
LINC02538-201ENST00000609107 PCMTD1Q96MG8 357 aaPredicted RBP16.77■□□□□ 0.27
LINC02538-201ENST00000609107 ZBTB3Q9H5J0 574 aa16.77■□□□□ 0.27
LINC02538-201ENST00000609107 TDO2P48775 406 aa16.76■□□□□ 0.27
LINC02538-201ENST00000609107 USP48Q86UV5 1035 aa16.76■□□□□ 0.27
LINC02538-201ENST00000609107 PHF23Q9BUL5 403 aaPredicted RBP16.76■□□□□ 0.27
LINC02538-201ENST00000609107 ANO10Q9NW15 660 aa16.76■□□□□ 0.27
LINC02538-201ENST00000609107 SERPINC1P01008 464 aa16.76■□□□□ 0.27
LINC02538-201ENST00000609107 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
LINC02538-201ENST00000609107 C8orf76Q96K31 380 aa16.76■□□□□ 0.27
LINC02538-201ENST00000609107 RTL1A6NKG5 1358 aa16.76■□□□□ 0.27
LINC02538-201ENST00000609107 SMTNL1A8MU46 457 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 CBFA2T2O43439 604 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 SLC39A6Q13433 755 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 CCDC112Q8NEF3 446 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 METP08581 1390 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 USP19O94966 1318 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 RAD50Q92878 1312 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 F13A1P00488 732 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 FILIP1LQ4L180 1135 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 CCDC70Q6NSX1 233 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 DDX21Q9NR30 783 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC02538-201ENST00000609107 IGHMBP2P38935 993 aaKnown RBP16.75■□□□□ 0.27
LINC02538-201ENST00000609107 AK2P54819 239 aa16.75■□□□□ 0.27
LINC02538-201ENST00000609107 UBAC1Q9BSL1 405 aa16.74■□□□□ 0.27
LINC02538-201ENST00000609107 ZSCAN16Q9H4T2 348 aaPredicted RBP16.74■□□□□ 0.27
LINC02538-201ENST00000609107 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
LINC02538-201ENST00000609107 ZNF213O14771 459 aa16.74■□□□□ 0.27
LINC02538-201ENST00000609107 EPB41L2O43491 1005 aaKnown RBP16.74■□□□□ 0.27
LINC02538-201ENST00000609107 ZNF853P0CG23 659 aa16.74■□□□□ 0.27
LINC02538-201ENST00000609107 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
LINC02538-201ENST00000609107 CWF19L2Q2TBE0 894 aaKnown RBP16.74■□□□□ 0.27
LINC02538-201ENST00000609107 NECAB1Q8N987 351 aa16.74■□□□□ 0.27
LINC02538-201ENST00000609107 CNPY2Q9Y2B0 182 aa16.74■□□□□ 0.27
LINC02538-201ENST00000609107 CAVIN2O95810 425 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms