RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PTPRMP28827 1452 aa14.85□□□□□ -0.03
CTCFL-218ENST00000608440 CAMK4Q16566 473 aa14.85□□□□□ -0.03
CTCFL-218ENST00000608440 FAM200AQ8TCP9 573 aa14.85□□□□□ -0.03
CTCFL-218ENST00000608440 RNF20Q5VTR2 975 aa14.85□□□□□ -0.03
CTCFL-218ENST00000608440 REXO1L1PQ8IX06 675 aa14.85□□□□□ -0.03
CTCFL-218ENST00000608440 WDR33Q9C0J8 1336 aaKnown RBP14.84□□□□□ -0.03
CTCFL-218ENST00000608440 HSP90B1P14625 803 aaKnown RBP14.84□□□□□ -0.03
CTCFL-218ENST00000608440 TTC22Q5TAA0 569 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 FOXR1Q6PIV2 292 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 AK7Q96M32 723 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 KDM5AP29375 1690 aaKnown RBP14.84□□□□□ -0.03
CTCFL-218ENST00000608440 APBB1O00213 710 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 DTNBO60941 627 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 ZNF75DP51815 510 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 TTLL5Q6EMB2 1281 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 NYAP1Q6ZVC0 841 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 SIRT2Q8IXJ6 389 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 OTUD7AQ8TE49 926 aaPredicted RBP14.84□□□□□ -0.03
CTCFL-218ENST00000608440 CCDC171Q6TFL3 1326 aa14.84□□□□□ -0.03
CTCFL-218ENST00000608440 EIF3CLB5ME19 914 aaKnown RBP14.83□□□□□ -0.04
CTCFL-218ENST00000608440 ZRANB2O95218 330 aaKnown RBP eCLIP14.83□□□□□ -0.04
CTCFL-218ENST00000608440 MAP2K2P36507 400 aa14.83□□□□□ -0.04
CTCFL-218ENST00000608440 EIF3CQ99613 913 aaKnown RBP14.83□□□□□ -0.04
CTCFL-218ENST00000608440 SDSP20132 328 aa14.83□□□□□ -0.04
CTCFL-218ENST00000608440 CASTP20810 708 aaKnown RBP14.83□□□□□ -0.04
CTCFL-218ENST00000608440 SMC1AQ14683 1233 aaKnown RBP14.83□□□□□ -0.04
CTCFL-218ENST00000608440 CASC1Q6TDU7 716 aa14.83□□□□□ -0.04
CTCFL-218ENST00000608440 SKILP12757 684 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 HSP90AB3PQ58FF7 597 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 ANKRD20A12PQ8NF67 263 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 PRAM1Q96QH2 718 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 NRXN3Q9Y4C0 1643 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 MYOM1P52179 1685 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 IPO8O15397 1037 aaKnown RBP14.82□□□□□ -0.04
CTCFL-218ENST00000608440 SASH3O75995 380 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 CUL4AQ13619 759 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 MCTP2Q6DN12 878 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 CKAP2LQ8IYA6 745 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 SGSM3Q96HU1 749 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 ARGLU1Q9NWB6 273 aaPredicted RBP14.82□□□□□ -0.04
CTCFL-218ENST00000608440 ADAM21Q9UKJ8 722 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 RAD50Q92878 1312 aa14.82□□□□□ -0.04
CTCFL-218ENST00000608440 ACTN2P35609 894 aa14.81□□□□□ -0.04
CTCFL-218ENST00000608440 ATP6V1AP38606 617 aa14.81□□□□□ -0.04
CTCFL-218ENST00000608440 GSCP56915 257 aaPredicted RBP14.81□□□□□ -0.04
CTCFL-218ENST00000608440 LRRC8AQ8IWT6 810 aa14.81□□□□□ -0.04
CTCFL-218ENST00000608440 CBX8Q9HC52 389 aa14.81□□□□□ -0.04
CTCFL-218ENST00000608440 PDRG1Q9NUG6 133 aa14.81□□□□□ -0.04
CTCFL-218ENST00000608440 LTKP29376 864 aa14.81□□□□□ -0.04
CTCFL-218ENST00000608440 CFAP44Q96MT7 982 aa14.81□□□□□ -0.04
CTCFL-218ENST00000608440 UPF3BQ9BZI7 483 aaKnown RBP14.81□□□□□ -0.04
CTCFL-218ENST00000608440 MRVI1Q9Y6F6 885 aa14.81□□□□□ -0.04
CTCFL-218ENST00000608440 METP08581 1390 aa14.81□□□□□ -0.04
CTCFL-218ENST00000608440 HDGFP51858 240 aaKnown RBP14.8□□□□□ -0.04
CTCFL-218ENST00000608440 PPP2R5AQ15172 486 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 ANO6Q4KMQ2 910 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 LEKR1Q6ZMV7 388 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 TMEM87AQ8NBN3 555 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 EPC1Q9H2F5 836 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 MED4Q9NPJ6 270 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 MINK1Q8N4C8 1332 aaPredicted RBP14.8□□□□□ -0.04
CTCFL-218ENST00000608440 CCDC189A1A4V9 331 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 ZBTB7BO15156 539 aaPredicted RBP14.8□□□□□ -0.04
CTCFL-218ENST00000608440 KIF1CO43896 1103 aaKnown RBP14.8□□□□□ -0.04
CTCFL-218ENST00000608440 TYRO3Q06418 890 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 PLA2G4DQ86XP0 818 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 CARD14Q9BXL6 1004 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 TULP4Q9NRJ4 1543 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 TCHHQ07283 1943 aa14.8□□□□□ -0.04
CTCFL-218ENST00000608440 SETD1AO15047 1707 aaKnown RBP14.79□□□□□ -0.04
CTCFL-218ENST00000608440 FILIP1Q7Z7B0 1213 aa14.79□□□□□ -0.04
CTCFL-218ENST00000608440 TXNDC2Q86VQ3 553 aa14.79□□□□□ -0.04
CTCFL-218ENST00000608440 PPM1EQ8WY54 764 aa14.79□□□□□ -0.04
CTCFL-218ENST00000608440 UBXN4Q92575 508 aa14.79□□□□□ -0.04
CTCFL-218ENST00000608440 MNS1Q8NEH6 495 aa14.79□□□□□ -0.04
CTCFL-218ENST00000608440 ZNF853P0CG23 659 aa14.79□□□□□ -0.04
CTCFL-218ENST00000608440 CWC27Q6UX04 472 aaKnown RBP14.79□□□□□ -0.04
CTCFL-218ENST00000608440 ADAMTSL3P82987 1691 aa14.78□□□□□ -0.04
CTCFL-218ENST00000608440 U2AF1L5P0DN76 240 aaPredicted RBP14.78□□□□□ -0.04
CTCFL-218ENST00000608440 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.04
CTCFL-218ENST00000608440 INTS4Q96HW7 963 aaKnown RBP14.78□□□□□ -0.04
CTCFL-218ENST00000608440 PALD1Q9ULE6 856 aa14.78□□□□□ -0.04
CTCFL-218ENST00000608440 RPAP1Q9BWH6 1393 aaPredicted RBP14.78□□□□□ -0.04
CTCFL-218ENST00000608440 EVC2Q86UK5 1308 aa14.78□□□□□ -0.04
CTCFL-218ENST00000608440 ERC2O15083 957 aa14.78□□□□□ -0.04
CTCFL-218ENST00000608440 LRCH2Q5VUJ6 765 aa14.78□□□□□ -0.04
CTCFL-218ENST00000608440 CCAR2Q8N163 923 aaKnown RBP14.78□□□□□ -0.04
CTCFL-218ENST00000608440 CEP120Q8N960 986 aa14.78□□□□□ -0.04
CTCFL-218ENST00000608440 POLR3AO14802 1390 aaPredicted RBP14.77□□□□□ -0.04
CTCFL-218ENST00000608440 CT47B1P0C2W7 299 aaPredicted RBP14.77□□□□□ -0.04
CTCFL-218ENST00000608440 MCM2P49736 904 aa14.77□□□□□ -0.04
CTCFL-218ENST00000608440 SKIDA1Q1XH10 827 aa14.77□□□□□ -0.04
CTCFL-218ENST00000608440 RPAINQ86UA6 219 aa14.77□□□□□ -0.04
CTCFL-218ENST00000608440 LARP6Q9BRS8 491 aaKnown RBP14.77□□□□□ -0.04
CTCFL-218ENST00000608440 CABP2Q9NPB3 220 aa14.77□□□□□ -0.04
CTCFL-218ENST00000608440 EID1Q9Y6B2 187 aa14.77□□□□□ -0.04
CTCFL-218ENST00000608440 TBC1D8O95759 1140 aa14.77□□□□□ -0.05
CTCFL-218ENST00000608440 DNM1Q05193 864 aaKnown RBP14.77□□□□□ -0.05
CTCFL-218ENST00000608440 SNW1Q13573 536 aaKnown RBP14.77□□□□□ -0.05
CTCFL-218ENST00000608440 SWT1Q5T5J6 900 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms