RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 CDK2AP1O14519 115 aa8.06□□□□□ -1.12
RNU4-89P-201ENST00000607443 ADGRE1Q14246 886 aa8.06□□□□□ -1.12
RNU4-89P-201ENST00000607443 OXLD1Q5BKU9 147 aa8.06□□□□□ -1.12
RNU4-89P-201ENST00000607443 NID1P14543 1247 aa8.05□□□□□ -1.12
RNU4-89P-201ENST00000607443 BANK1Q8NDB2 785 aa8.05□□□□□ -1.12
RNU4-89P-201ENST00000607443 SLC4A9Q96Q91 983 aa8.05□□□□□ -1.12
RNU4-89P-201ENST00000607443 CHIC2Q9UKJ5 165 aa8.05□□□□□ -1.12
RNU4-89P-201ENST00000607443 IQSEC3Q9UPP2 1182 aaPredicted RBP8.05□□□□□ -1.12
RNU4-89P-201ENST00000607443 ALBP02768 609 aa8.04□□□□□ -1.12
RNU4-89P-201ENST00000607443 MBTPS1Q14703 1052 aa8.04□□□□□ -1.12
RNU4-89P-201ENST00000607443 SLFNL1Q499Z3 407 aa8.04□□□□□ -1.12
RNU4-89P-201ENST00000607443 BICDL1Q6ZP65 573 aa8.04□□□□□ -1.12
RNU4-89P-201ENST00000607443 MTMR14Q8NCE2 650 aa8.04□□□□□ -1.12
RNU4-89P-201ENST00000607443 TNFRSF25Q93038 417 aa8.04□□□□□ -1.12
RNU4-89P-201ENST00000607443 SERTAD1Q9UHV2 236 aa8.04□□□□□ -1.12
RNU4-89P-201ENST00000607443 A6NJY4 79 aa8.03□□□□□ -1.12
RNU4-89P-201ENST00000607443 SELPP16109 830 aa8.03□□□□□ -1.12
RNU4-89P-201ENST00000607443 MTFR1Q15390 333 aa8.03□□□□□ -1.12
RNU4-89P-201ENST00000607443 CABP1Q9NZU7 370 aa8.03□□□□□ -1.12
RNU4-89P-201ENST00000607443 TXNRD3Q86VQ6 643 aa8.02□□□□□ -1.13
RNU4-89P-201ENST00000607443 USP3Q9Y6I4 520 aa8.02□□□□□ -1.13
RNU4-89P-201ENST00000607443 TRAPPC3LQ5T215 181 aa8.01□□□□□ -1.13
RNU4-89P-201ENST00000607443 C20orf204Q6ZNR8 217 aa8.01□□□□□ -1.13
RNU4-89P-201ENST00000607443 EIF4G2P78344 907 aaKnown RBP eCLIP8□□□□□ -1.13
RNU4-89P-201ENST00000607443 TP53INP1Q96A56 240 aa8□□□□□ -1.13
RNU4-89P-201ENST00000607443 LENG1Q96BZ8 264 aaPredicted RBP8□□□□□ -1.13
RNU4-89P-201ENST00000607443 SLC30A3Q99726 388 aa8□□□□□ -1.13
RNU4-89P-201ENST00000607443 PARP3Q9Y6F1 533 aa8□□□□□ -1.13
RNU4-89P-201ENST00000607443 TMEM229AB2RXF0 380 aa7.99□□□□□ -1.13
RNU4-89P-201ENST00000607443 APBB1O00213 710 aa7.99□□□□□ -1.13
RNU4-89P-201ENST00000607443 ELNP15502 786 aa7.99□□□□□ -1.13
RNU4-89P-201ENST00000607443 ADH7P40394 386 aa7.99□□□□□ -1.13
RNU4-89P-201ENST00000607443 SMARCA2P51531 1590 aa7.99□□□□□ -1.13
RNU4-89P-201ENST00000607443 NRG1Q02297 640 aaPredicted RBP7.99□□□□□ -1.13
RNU4-89P-201ENST00000607443 SFSWAPQ12872 951 aaKnown RBP7.99□□□□□ -1.13
RNU4-89P-201ENST00000607443 MCTP1Q6DN14 999 aa7.99□□□□□ -1.13
RNU4-89P-201ENST00000607443 SMARCA4P51532 1647 aa7.99□□□□□ -1.13
RNU4-89P-201ENST00000607443 TXLNAP40222 546 aa7.98□□□□□ -1.13
RNU4-89P-201ENST00000607443 LRRC69Q6ZNQ3 347 aa7.98□□□□□ -1.13
RNU4-89P-201ENST00000607443 SNRKQ9NRH2 765 aa7.98□□□□□ -1.13
RNU4-89P-201ENST00000607443 A0A0A0MRY4 1105 aa7.97□□□□□ -1.13
RNU4-89P-201ENST00000607443 SSBP4Q9BWG4 385 aaPredicted RBP7.97□□□□□ -1.13
RNU4-89P-201ENST00000607443 HMGXB3Q12766 1538 aa7.97□□□□□ -1.13
RNU4-89P-201ENST00000607443 BAZ1AQ9NRL2 1556 aaPredicted RBP7.97□□□□□ -1.13
RNU4-89P-201ENST00000607443 LILRB5O75023 590 aa7.96□□□□□ -1.14
RNU4-89P-201ENST00000607443 MAP7D1Q3KQU3 841 aa7.96□□□□□ -1.14
RNU4-89P-201ENST00000607443 SHISA2Q6UWI4 295 aa7.96□□□□□ -1.14
RNU4-89P-201ENST00000607443 C7orf43Q8WVR3 580 aa7.96□□□□□ -1.14
RNU4-89P-201ENST00000607443 RNF112Q9ULX5 631 aa7.96□□□□□ -1.14
RNU4-89P-201ENST00000607443 NCAPD3P42695 1498 aa7.95□□□□□ -1.14
RNU4-89P-201ENST00000607443 SPEM2Q0P670 501 aa7.95□□□□□ -1.14
RNU4-89P-201ENST00000607443 NEUROD1Q13562 356 aa7.95□□□□□ -1.14
RNU4-89P-201ENST00000607443 ZDHHC1Q8WTX9 485 aa7.95□□□□□ -1.14
RNU4-89P-201ENST00000607443 NEUROD4Q9HD90 331 aa7.95□□□□□ -1.14
RNU4-89P-201ENST00000607443 COL17A1Q9UMD9 1497 aaPredicted RBP7.94□□□□□ -1.14
RNU4-89P-201ENST00000607443 EML1O00423 815 aa7.94□□□□□ -1.14
RNU4-89P-201ENST00000607443 RAC1P63000 192 aa7.94□□□□□ -1.14
RNU4-89P-201ENST00000607443 L3MBTL2Q969R5 705 aa7.94□□□□□ -1.14
RNU4-89P-201ENST00000607443 ATAD2BQ9ULI0 1458 aa7.94□□□□□ -1.14
RNU4-89P-201ENST00000607443 RAB44Q7Z6P3 723 aaPredicted RBP7.93□□□□□ -1.14
RNU4-89P-201ENST00000607443 PLPP7Q8NBV4 271 aa7.93□□□□□ -1.14
RNU4-89P-201ENST00000607443 GPC6Q9Y625 555 aaPredicted RBP7.93□□□□□ -1.14
RNU4-89P-201ENST00000607443 PAX4O43316 350 aa7.92□□□□□ -1.14
RNU4-89P-201ENST00000607443 NOS2P35228 1153 aa7.92□□□□□ -1.14
RNU4-89P-201ENST00000607443 TXKP42681 527 aa7.92□□□□□ -1.14
RNU4-89P-201ENST00000607443 TEAD4Q15561 434 aa7.92□□□□□ -1.14
RNU4-89P-201ENST00000607443 IL27Q8NEV9 243 aa7.92□□□□□ -1.14
RNU4-89P-201ENST00000607443 SCHIP1Q9P0W5 487 aaPredicted RBP7.92□□□□□ -1.14
RNU4-89P-201ENST00000607443 PCDHGA11Q9Y5H2 935 aa7.92□□□□□ -1.14
RNU4-89P-201ENST00000607443 BACH1O14867 736 aa7.91□□□□□ -1.14
RNU4-89P-201ENST00000607443 USP21Q9UK80 565 aa7.91□□□□□ -1.14
RNU4-89P-201ENST00000607443 TBC1D2BQ9UPU7 963 aa7.91□□□□□ -1.14
RNU4-89P-201ENST00000607443 ERCC6Q03468 1493 aa7.91□□□□□ -1.14
RNU4-89P-201ENST00000607443 BAZ1BQ9UIG0 1483 aaKnown RBP7.91□□□□□ -1.14
RNU4-89P-201ENST00000607443 PEG3Q9GZU2 1588 aa7.9□□□□□ -1.14
RNU4-89P-201ENST00000607443 COBLO75128 1261 aa7.9□□□□□ -1.14
RNU4-89P-201ENST00000607443 IRF5Q13568 498 aa7.9□□□□□ -1.14
RNU4-89P-201ENST00000607443 ILDR2Q71H61 639 aa7.9□□□□□ -1.14
RNU4-89P-201ENST00000607443 KCNQ4P56696 695 aa7.89□□□□□ -1.15
RNU4-89P-201ENST00000607443 FMR1NBQ8N0W7 255 aaPredicted RBP7.89□□□□□ -1.15
RNU4-89P-201ENST00000607443 FMNL2Q96PY5 1086 aa7.89□□□□□ -1.15
RNU4-89P-201ENST00000607443 CUX2O14529 1486 aa7.88□□□□□ -1.15
RNU4-89P-201ENST00000607443 YBX3P16989 372 aaKnown RBP eCLIP7.88□□□□□ -1.15
RNU4-89P-201ENST00000607443 KRTAP4-7Q9BYR0 210 aa7.88□□□□□ -1.15
RNU4-89P-201ENST00000607443 JPH1Q9HDC5 661 aaPredicted RBP7.88□□□□□ -1.15
RNU4-89P-201ENST00000607443 BRD7Q9NPI1 651 aa7.88□□□□□ -1.15
RNU4-89P-201ENST00000607443 AFF1P51825 1210 aaKnown RBP7.87□□□□□ -1.15
RNU4-89P-201ENST00000607443 DMRTC2Q8IXT2 367 aaPredicted RBP7.87□□□□□ -1.15
RNU4-89P-201ENST00000607443 NUDT8Q8WV74 236 aa7.87□□□□□ -1.15
RNU4-89P-201ENST00000607443 WFDC12Q8WWY7 111 aa7.87□□□□□ -1.15
RNU4-89P-201ENST00000607443 CEP63Q96MT8 703 aa7.87□□□□□ -1.15
RNU4-89P-201ENST00000607443 ZNF232Q9UNY5 417 aa7.87□□□□□ -1.15
RNU4-89P-201ENST00000607443 KCNH4Q9UQ05 1017 aa7.87□□□□□ -1.15
RNU4-89P-201ENST00000607443 VAC14Q08AM6 782 aa7.86□□□□□ -1.15
RNU4-89P-201ENST00000607443 LCE1DQ5T752 114 aa7.86□□□□□ -1.15
RNU4-89P-201ENST00000607443 RHPN1Q8TCX5 695 aa7.86□□□□□ -1.15
RNU4-89P-201ENST00000607443 BHMTQ93088 406 aa7.86□□□□□ -1.15
RNU4-89P-201ENST00000607443 PCMTD2Q9NV79 361 aa7.86□□□□□ -1.15
RNU4-89P-201ENST00000607443 SLC6A14Q9UN76 642 aa7.86□□□□□ -1.15
RNU4-89P-201ENST00000607443 IREB2P48200 963 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms