RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 ELOA3BQ3SY89 546 aa9.41□□□□□ -0.9
UCHL3-205ENST00000607339 DEPDC4Q8N2C3 294 aa9.41□□□□□ -0.9
UCHL3-205ENST00000607339 ELOA3Q8NG57 546 aa9.41□□□□□ -0.9
UCHL3-205ENST00000607339 PARP3Q9Y6F1 533 aa9.41□□□□□ -0.9
UCHL3-205ENST00000607339 USP3Q9Y6I4 520 aa9.41□□□□□ -0.9
UCHL3-205ENST00000607339 KRBA1A5PL33 1030 aa9.4□□□□□ -0.9
UCHL3-205ENST00000607339 K7ELQ4 463 aaPredicted RBP9.4□□□□□ -0.9
UCHL3-205ENST00000607339 TXLNAP40222 546 aa9.4□□□□□ -0.9
UCHL3-205ENST00000607339 HDGFL1Q5TGJ6 251 aa9.4□□□□□ -0.9
UCHL3-205ENST00000607339 SIX5Q8N196 739 aa9.4□□□□□ -0.9
UCHL3-205ENST00000607339 GAS2L2Q8NHY3 880 aa9.4□□□□□ -0.9
UCHL3-205ENST00000607339 ZDHHC1Q8WTX9 485 aa9.4□□□□□ -0.9
UCHL3-205ENST00000607339 HOXB4P17483 251 aaPredicted RBP9.39□□□□□ -0.91
UCHL3-205ENST00000607339 COL8A1P27658 744 aa9.39□□□□□ -0.91
UCHL3-205ENST00000607339 LRRC69Q6ZNQ3 347 aa9.39□□□□□ -0.91
UCHL3-205ENST00000607339 FCHSD1Q86WN1 690 aa9.39□□□□□ -0.91
UCHL3-205ENST00000607339 TNS4Q8IZW8 715 aa9.39□□□□□ -0.91
UCHL3-205ENST00000607339 OGFOD1Q8N543 542 aa9.39□□□□□ -0.91
UCHL3-205ENST00000607339 EFCC1Q9HA90 598 aa9.39□□□□□ -0.91
UCHL3-205ENST00000607339 SPATA31C1P0DKV0 1188 aa9.38□□□□□ -0.91
UCHL3-205ENST00000607339 BAG6P46379 1132 aa9.38□□□□□ -0.91
UCHL3-205ENST00000607339 PCBP4P57723 403 aaKnown RBP9.38□□□□□ -0.91
UCHL3-205ENST00000607339 STAG2Q8N3U4 1231 aa9.38□□□□□ -0.91
UCHL3-205ENST00000607339 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
UCHL3-205ENST00000607339 ADARB2-AS1A8MUL3 147 aa9.37□□□□□ -0.91
UCHL3-205ENST00000607339 ITGB2P05107 769 aa9.37□□□□□ -0.91
UCHL3-205ENST00000607339 PRKCSHP14314 528 aaPredicted RBP9.37□□□□□ -0.91
UCHL3-205ENST00000607339 PRRT3Q5FWE3 981 aa9.37□□□□□ -0.91
UCHL3-205ENST00000607339 SYT9Q86SS6 491 aa9.37□□□□□ -0.91
UCHL3-205ENST00000607339 POTEAQ6S8J7 498 aa9.36□□□□□ -0.91
UCHL3-205ENST00000607339 POM121CA8CG34 1229 aa9.35□□□□□ -0.91
UCHL3-205ENST00000607339 CLDN10P78369 228 aa9.35□□□□□ -0.91
UCHL3-205ENST00000607339 PROSER2Q86WR7 435 aaPredicted RBP9.35□□□□□ -0.91
UCHL3-205ENST00000607339 TNFRSF25Q93038 417 aa9.35□□□□□ -0.91
UCHL3-205ENST00000607339 TSPAN10Q9H1Z9 355 aaPredicted RBP9.35□□□□□ -0.91
UCHL3-205ENST00000607339 SUV39H2Q9H5I1 410 aa9.35□□□□□ -0.91
UCHL3-205ENST00000607339 PPP1R12BO60237 982 aaPredicted RBP9.34□□□□□ -0.91
UCHL3-205ENST00000607339 KCNQ4P56696 695 aa9.34□□□□□ -0.91
UCHL3-205ENST00000607339 TMEM132AQ24JP5 1023 aa9.34□□□□□ -0.91
UCHL3-205ENST00000607339 ADAMTS19Q8TE59 1207 aa9.34□□□□□ -0.91
UCHL3-205ENST00000607339 CEP63Q96MT8 703 aa9.34□□□□□ -0.91
UCHL3-205ENST00000607339 NACC1Q96RE7 527 aa9.34□□□□□ -0.91
UCHL3-205ENST00000607339 UCN2Q96RP3 112 aa9.34□□□□□ -0.91
UCHL3-205ENST00000607339 BRD7Q9NPI1 651 aa9.34□□□□□ -0.91
UCHL3-205ENST00000607339 PRDM6Q9NQX0 595 aa9.34□□□□□ -0.91
UCHL3-205ENST00000607339 KLF15Q9UIH9 416 aa9.34□□□□□ -0.91
UCHL3-205ENST00000607339 ZBTB7BO15156 539 aaPredicted RBP9.33□□□□□ -0.92
UCHL3-205ENST00000607339 SEC13P55735 322 aa9.33□□□□□ -0.92
UCHL3-205ENST00000607339 SPEM2Q0P670 501 aa9.33□□□□□ -0.92
UCHL3-205ENST00000607339 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
UCHL3-205ENST00000607339 PHACTR1Q9C0D0 580 aa9.33□□□□□ -0.92
UCHL3-205ENST00000607339 STRN4Q9NRL3 753 aa9.33□□□□□ -0.92
UCHL3-205ENST00000607339 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
UCHL3-205ENST00000607339 APBA3O96018 575 aa9.32□□□□□ -0.92
UCHL3-205ENST00000607339 RASA1P20936 1047 aa9.32□□□□□ -0.92
UCHL3-205ENST00000607339 TBCELQ5QJ74 424 aa9.32□□□□□ -0.92
UCHL3-205ENST00000607339 GLMNQ92990 594 aa9.32□□□□□ -0.92
UCHL3-205ENST00000607339 ZNF594Q96JF6 807 aaPredicted RBP9.32□□□□□ -0.92
UCHL3-205ENST00000607339 PLVAPQ9BX97 442 aa9.32□□□□□ -0.92
UCHL3-205ENST00000607339 KCNH4Q9UQ05 1017 aa9.32□□□□□ -0.92
UCHL3-205ENST00000607339 C1QTNF9BB2RNN3 333 aa9.31□□□□□ -0.92
UCHL3-205ENST00000607339 EPB42P16452 691 aa9.3□□□□□ -0.92
UCHL3-205ENST00000607339 TYRO3Q06418 890 aa9.3□□□□□ -0.92
UCHL3-205ENST00000607339 IER5Q5VY09 327 aa9.3□□□□□ -0.92
UCHL3-205ENST00000607339 CD163Q86VB7 1156 aa9.3□□□□□ -0.92
UCHL3-205ENST00000607339 ADH7P40394 386 aa9.29□□□□□ -0.92
UCHL3-205ENST00000607339 TSEN2Q8NCE0 465 aaKnown RBP9.29□□□□□ -0.92
UCHL3-205ENST00000607339 C7orf43Q8WVR3 580 aa9.29□□□□□ -0.92
UCHL3-205ENST00000607339 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
UCHL3-205ENST00000607339 MDFIQ99750 246 aa9.29□□□□□ -0.92
UCHL3-205ENST00000607339 MAFBQ9Y5Q3 323 aaPredicted RBP9.29□□□□□ -0.92
UCHL3-205ENST00000607339 GATA4P43694 442 aa9.28□□□□□ -0.92
UCHL3-205ENST00000607339 SFSWAPQ12872 951 aaKnown RBP9.28□□□□□ -0.92
UCHL3-205ENST00000607339 PCSK7Q16549 785 aa9.28□□□□□ -0.92
UCHL3-205ENST00000607339 ALDH16A1Q8IZ83 802 aa9.28□□□□□ -0.92
UCHL3-205ENST00000607339 TRIM11Q96F44 468 aa9.28□□□□□ -0.92
UCHL3-205ENST00000607339 C2orf49Q9BVC5 232 aaPredicted RBP9.28□□□□□ -0.92
UCHL3-205ENST00000607339 HCN2Q9UL51 889 aa9.28□□□□□ -0.92
UCHL3-205ENST00000607339 HCN4Q9Y3Q4 1203 aa9.28□□□□□ -0.92
UCHL3-205ENST00000607339 ATAD2Q6PL18 1390 aa9.27□□□□□ -0.93
UCHL3-205ENST00000607339 SFI1A8K8P3 1242 aa9.27□□□□□ -0.93
UCHL3-205ENST00000607339 M0R082 166 aa9.27□□□□□ -0.93
UCHL3-205ENST00000607339 RTN1Q16799 776 aa9.27□□□□□ -0.93
UCHL3-205ENST00000607339 ZNF417Q8TAU3 575 aa9.27□□□□□ -0.93
UCHL3-205ENST00000607339 CALR3Q96L12 384 aaKnown RBP9.27□□□□□ -0.93
UCHL3-205ENST00000607339 ZNF587Q96SQ5 575 aaPredicted RBP9.27□□□□□ -0.93
UCHL3-205ENST00000607339 A6NJR5 290 aa9.26□□□□□ -0.93
UCHL3-205ENST00000607339 CHRNA4P43681 627 aa9.26□□□□□ -0.93
UCHL3-205ENST00000607339 TRIM28Q13263 835 aaKnown RBP9.26□□□□□ -0.93
UCHL3-205ENST00000607339 SH3PXD2AQ5TCZ1 1133 aa9.26□□□□□ -0.93
UCHL3-205ENST00000607339 SCG3Q8WXD2 468 aaKnown RBP9.26□□□□□ -0.93
UCHL3-205ENST00000607339 HSH2DQ96JZ2 352 aa9.26□□□□□ -0.93
UCHL3-205ENST00000607339 PNMA5Q96PV4 448 aa9.26□□□□□ -0.93
UCHL3-205ENST00000607339 SLC30A3Q99726 388 aa9.26□□□□□ -0.93
UCHL3-205ENST00000607339 TFIP11Q9UBB9 837 aaKnown RBP9.26□□□□□ -0.93
UCHL3-205ENST00000607339 FAM196BA6NMK8 535 aa9.25□□□□□ -0.93
UCHL3-205ENST00000607339 IGFBP4P22692 258 aa9.25□□□□□ -0.93
UCHL3-205ENST00000607339 BTLAQ7Z6A9 289 aa9.25□□□□□ -0.93
UCHL3-205ENST00000607339 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
UCHL3-205ENST00000607339 C11orf16Q9NQ32 467 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms