RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
PKNOX1-210ENST00000607049 SCN7AQ01118 1682 aa18.78■□□□□ 0.6
PKNOX1-210ENST00000607049 CHL1O00533 1208 aa18.77■□□□□ 0.6
PKNOX1-210ENST00000607049 ZNF622Q969S3 477 aaKnown RBP eCLIP18.77■□□□□ 0.6
PKNOX1-210ENST00000607049 TRIM35Q9UPQ4 493 aa18.77■□□□□ 0.6
PKNOX1-210ENST00000607049 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.6
PKNOX1-210ENST00000607049 ATP10DQ9P241 1426 aa18.76■□□□□ 0.59
PKNOX1-210ENST00000607049 APAF1O14727 1248 aa18.76■□□□□ 0.59
PKNOX1-210ENST00000607049 NYXQ9GZU5 481 aa18.76■□□□□ 0.59
PKNOX1-210ENST00000607049 MAP3K15Q6ZN16 1313 aa18.75■□□□□ 0.59
PKNOX1-210ENST00000607049 CFAP44Q96MT7 982 aa18.75■□□□□ 0.59
PKNOX1-210ENST00000607049 CNKSR1Q969H4 720 aa18.74■□□□□ 0.59
PKNOX1-210ENST00000607049 CHMP4AQ9BY43 222 aa18.74■□□□□ 0.59
PKNOX1-210ENST00000607049 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
PKNOX1-210ENST00000607049 KIAA1551Q9HCM1 1747 aa18.74■□□□□ 0.59
PKNOX1-210ENST00000607049 NRXN2Q9P2S2 1712 aa18.74■□□□□ 0.59
PKNOX1-210ENST00000607049 LAMB4A4D0S4 1761 aa18.73■□□□□ 0.59
PKNOX1-210ENST00000607049 HOXB7P09629 217 aa18.73■□□□□ 0.59
PKNOX1-210ENST00000607049 GNAI1P63096 354 aa18.73■□□□□ 0.59
PKNOX1-210ENST00000607049 CCDC24Q8N4L8 307 aa18.73■□□□□ 0.59
PKNOX1-210ENST00000607049 ZNF526Q8TF50 670 aaPredicted RBP18.73■□□□□ 0.59
PKNOX1-210ENST00000607049 ZBTB3Q9H5J0 574 aa18.73■□□□□ 0.59
PKNOX1-210ENST00000607049 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
PKNOX1-210ENST00000607049 FAM177BA6PVY3 158 aa18.72■□□□□ 0.59
PKNOX1-210ENST00000607049 HLFQ16534 295 aa18.72■□□□□ 0.59
PKNOX1-210ENST00000607049 STYK1Q6J9G0 422 aa18.72■□□□□ 0.59
PKNOX1-210ENST00000607049 MASTLQ96GX5 879 aa18.72■□□□□ 0.59
PKNOX1-210ENST00000607049 ADCY9O60503 1353 aa18.71■□□□□ 0.59
PKNOX1-210ENST00000607049 SOGA3Q5TF21 947 aa18.71■□□□□ 0.59
PKNOX1-210ENST00000607049 C9orf131Q5VYM1 1079 aa18.71■□□□□ 0.59
PKNOX1-210ENST00000607049 TTLL7Q6ZT98 887 aa18.71■□□□□ 0.59
PKNOX1-210ENST00000607049 IFT57Q9NWB7 429 aa18.71■□□□□ 0.59
PKNOX1-210ENST00000607049 HSP90AB3PQ58FF7 597 aa18.7■□□□□ 0.58
PKNOX1-210ENST00000607049 HDGFL1Q5TGJ6 251 aa18.7■□□□□ 0.58
PKNOX1-210ENST00000607049 DDX21Q9NR30 783 aaKnown RBP eCLIP18.7■□□□□ 0.58
PKNOX1-210ENST00000607049 RNF181Q9P0P0 153 aa18.7■□□□□ 0.58
PKNOX1-210ENST00000607049 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
PKNOX1-210ENST00000607049 SRGNP10124 158 aa18.69■□□□□ 0.58
PKNOX1-210ENST00000607049 NPR1P16066 1061 aa18.69■□□□□ 0.58
PKNOX1-210ENST00000607049 C1QTNF8P60827 252 aa18.69■□□□□ 0.58
PKNOX1-210ENST00000607049 PARP10Q53GL7 1025 aa18.69■□□□□ 0.58
PKNOX1-210ENST00000607049 GIGYF2Q6Y7W6 1299 aaKnown RBP18.69■□□□□ 0.58
PKNOX1-210ENST00000607049 PPP1R42Q7Z4L9 355 aa18.69■□□□□ 0.58
PKNOX1-210ENST00000607049 NECTIN2Q92692 538 aa18.69■□□□□ 0.58
PKNOX1-210ENST00000607049 GPTP24298 496 aa18.68■□□□□ 0.58
PKNOX1-210ENST00000607049 DBF4Q9UBU7 674 aaPredicted RBP18.68■□□□□ 0.58
PKNOX1-210ENST00000607049 BRCA1P38398 1863 aaKnown RBP18.68■□□□□ 0.58
PKNOX1-210ENST00000607049 ARFGEF1Q9Y6D6 1849 aa18.67■□□□□ 0.58
PKNOX1-210ENST00000607049 LMNB1P20700 586 aa18.67■□□□□ 0.58
PKNOX1-210ENST00000607049 AIMP1Q12904 312 aaKnown RBP18.67■□□□□ 0.58
PKNOX1-210ENST00000607049 PDIA6Q15084 440 aa18.67■□□□□ 0.58
PKNOX1-210ENST00000607049 MBIPQ9NS73 344 aa18.67■□□□□ 0.58
PKNOX1-210ENST00000607049 C21orf2O43822 256 aa18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 ALDH1B1P30837 517 aa18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 DUSP27Q5VZP5 1158 aa18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 PRPF40BQ6NWY9 871 aaKnown RBP18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 COPS6Q7L5N1 327 aa18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 HYPKQ9NX55 129 aa18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 KDM2BQ8NHM5 1336 aa18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 ZC3H4Q9UPT8 1303 aaKnown RBP18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 IBTKQ9P2D0 1353 aaPredicted RBP18.66■□□□□ 0.58
PKNOX1-210ENST00000607049 ANXA1P04083 346 aa18.65■□□□□ 0.58
PKNOX1-210ENST00000607049 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
PKNOX1-210ENST00000607049 KRT24Q2M2I5 525 aa18.65■□□□□ 0.58
PKNOX1-210ENST00000607049 ZNF34Q8IZ26 560 aa18.65■□□□□ 0.58
PKNOX1-210ENST00000607049 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
PKNOX1-210ENST00000607049 CHPF2Q9P2E5 772 aa18.65■□□□□ 0.58
PKNOX1-210ENST00000607049 KLRG2A4D1S0 409 aaPredicted RBP18.64■□□□□ 0.57
PKNOX1-210ENST00000607049 CCDC27Q2M243 656 aa18.64■□□□□ 0.57
PKNOX1-210ENST00000607049 PROSER3Q2NL68 480 aa18.64■□□□□ 0.57
PKNOX1-210ENST00000607049 CCDC184Q52MB2 194 aa18.64■□□□□ 0.57
PKNOX1-210ENST00000607049 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
PKNOX1-210ENST00000607049 UTP14AQ9BVJ6 771 aaKnown RBP18.64■□□□□ 0.57
PKNOX1-210ENST00000607049 RASSF7Q02833 373 aa18.63■□□□□ 0.57
PKNOX1-210ENST00000607049 NCBP3Q53F19 620 aaKnown RBP18.63■□□□□ 0.57
PKNOX1-210ENST00000607049 NUTM1Q86Y26 1132 aa18.63■□□□□ 0.57
PKNOX1-210ENST00000607049 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
PKNOX1-210ENST00000607049 TAOK3Q9H2K8 898 aa18.63■□□□□ 0.57
PKNOX1-210ENST00000607049 RNF123Q5XPI4 1314 aa18.63■□□□□ 0.57
PKNOX1-210ENST00000607049 DLEC1Q9Y238 1755 aa18.63■□□□□ 0.57
PKNOX1-210ENST00000607049 ERFEQ4G0M1 354 aa18.62■□□□□ 0.57
PKNOX1-210ENST00000607049 CCDC93Q567U6 631 aa18.62■□□□□ 0.57
PKNOX1-210ENST00000607049 SUSD4Q5VX71 490 aa18.62■□□□□ 0.57
PKNOX1-210ENST00000607049 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
PKNOX1-210ENST00000607049 C16orf71Q8IYS4 520 aaPredicted RBP18.62■□□□□ 0.57
PKNOX1-210ENST00000607049 UBN2Q6ZU65 1347 aa18.61■□□□□ 0.57
PKNOX1-210ENST00000607049 ANKRD13DQ6ZTN6 518 aa18.61■□□□□ 0.57
PKNOX1-210ENST00000607049 PLBD2Q8NHP8 589 aa18.61■□□□□ 0.57
PKNOX1-210ENST00000607049 NLRP3Q96P20 1036 aa18.61■□□□□ 0.57
PKNOX1-210ENST00000607049 NFKBIEO00221 500 aa18.6■□□□□ 0.57
PKNOX1-210ENST00000607049 ELL2O00472 640 aaPredicted RBP18.6■□□□□ 0.57
PKNOX1-210ENST00000607049 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
PKNOX1-210ENST00000607049 TCIRG1Q13488 830 aa18.6■□□□□ 0.57
PKNOX1-210ENST00000607049 CCDC30Q5VVM6 783 aa18.6■□□□□ 0.57
PKNOX1-210ENST00000607049 DPY19L2Q6NUT2 758 aa18.6■□□□□ 0.57
PKNOX1-210ENST00000607049 WWC1Q8IX03 1113 aa18.6■□□□□ 0.57
PKNOX1-210ENST00000607049 RTKN2Q8IZC4 609 aa18.6■□□□□ 0.57
PKNOX1-210ENST00000607049 RBM17Q96I25 401 aaKnown RBP18.6■□□□□ 0.57
PKNOX1-210ENST00000607049 ANKRD31Q8N7Z5 1873 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms