RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ATP10DQ9P241 1426 aa14.01□□□□□ -0.17
TUBE1-210ENST00000604967 UBN2Q6ZU65 1347 aa14.01□□□□□ -0.17
TUBE1-210ENST00000604967 EIF2S2P20042 333 aaKnown RBP14.01□□□□□ -0.17
TUBE1-210ENST00000604967 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
TUBE1-210ENST00000604967 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
TUBE1-210ENST00000604967 PIM2Q9P1W9 311 aa14.01□□□□□ -0.17
TUBE1-210ENST00000604967 LAS1LQ9Y4W2 734 aaKnown RBP14.01□□□□□ -0.17
TUBE1-210ENST00000604967 CLEC4GQ6UXB4 293 aa14□□□□□ -0.17
TUBE1-210ENST00000604967 SLC51AQ86UW1 340 aa14□□□□□ -0.17
TUBE1-210ENST00000604967 C2CD5Q86YS7 1000 aa14□□□□□ -0.17
TUBE1-210ENST00000604967 SETDB2Q96T68 719 aa14□□□□□ -0.17
TUBE1-210ENST00000604967 TNRC6CQ9HCJ0 1690 aaKnown RBP14□□□□□ -0.17
TUBE1-210ENST00000604967 ABCC12Q96J65 1359 aa13.99□□□□□ -0.17
TUBE1-210ENST00000604967 MAP3K15Q6ZN16 1313 aa13.99□□□□□ -0.17
TUBE1-210ENST00000604967 DALRD3Q5D0E6 543 aaKnown RBP13.99□□□□□ -0.17
TUBE1-210ENST00000604967 ARHGAP27Q6ZUM4 889 aa13.99□□□□□ -0.17
TUBE1-210ENST00000604967 CFAP44Q96MT7 982 aa13.99□□□□□ -0.17
TUBE1-210ENST00000604967 ZBTB3Q9H5J0 574 aa13.99□□□□□ -0.17
TUBE1-210ENST00000604967 RASSF7Q02833 373 aa13.98□□□□□ -0.17
TUBE1-210ENST00000604967 CNBD1Q8NA66 436 aa13.98□□□□□ -0.17
TUBE1-210ENST00000604967 BRIP1Q9BX63 1249 aa13.98□□□□□ -0.17
TUBE1-210ENST00000604967 NIP7Q9Y221 180 aaKnown RBP eCLIP13.98□□□□□ -0.17
TUBE1-210ENST00000604967 NUP98P52948 1817 aa13.98□□□□□ -0.17
TUBE1-210ENST00000604967 KLRG2A4D1S0 409 aaPredicted RBP13.97□□□□□ -0.17
TUBE1-210ENST00000604967 FAM177BA6PVY3 158 aa13.97□□□□□ -0.17
TUBE1-210ENST00000604967 ERVV-1B6SEH8 477 aa13.97□□□□□ -0.17
TUBE1-210ENST00000604967 C3orf67Q6ZVT6 689 aa13.97□□□□□ -0.17
TUBE1-210ENST00000604967 ZNF34Q8IZ26 560 aa13.97□□□□□ -0.17
TUBE1-210ENST00000604967 MRS2Q9HD23 443 aa13.97□□□□□ -0.17
TUBE1-210ENST00000604967 ERBB4Q15303 1308 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 NFKBIEO00221 500 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 RGL2O15211 777 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 SRGNP10124 158 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 GPTP24298 496 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 DUSP27Q5VZP5 1158 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 NBPF5PQ86XG9 351 aaPredicted RBP13.96□□□□□ -0.17
TUBE1-210ENST00000604967 NUTM1Q86Y26 1132 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 C8orf58Q8NAV2 365 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 XAGE3Q8WTP9 111 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 CHPF2Q9P2E5 772 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 SLX4Q8IY92 1834 aa13.96□□□□□ -0.17
TUBE1-210ENST00000604967 H0YIN7 160 aa13.95□□□□□ -0.18
TUBE1-210ENST00000604967 ANP32CO43423 234 aa13.95□□□□□ -0.18
TUBE1-210ENST00000604967 SUSD4Q5VX71 490 aa13.95□□□□□ -0.18
TUBE1-210ENST00000604967 OLFM4Q6UX06 510 aa13.95□□□□□ -0.18
TUBE1-210ENST00000604967 COPS6Q7L5N1 327 aa13.95□□□□□ -0.18
TUBE1-210ENST00000604967 TSPYL6Q8N831 410 aa13.95□□□□□ -0.18
TUBE1-210ENST00000604967 TTLL6Q8N841 843 aa13.95□□□□□ -0.18
TUBE1-210ENST00000604967 ZNF428Q96B54 188 aa13.95□□□□□ -0.18
TUBE1-210ENST00000604967 IFT57Q9NWB7 429 aa13.95□□□□□ -0.18
TUBE1-210ENST00000604967 SBF1O95248 1867 aa13.94□□□□□ -0.18
TUBE1-210ENST00000604967 ERFEQ4G0M1 354 aa13.94□□□□□ -0.18
TUBE1-210ENST00000604967 C9orf131Q5VYM1 1079 aa13.94□□□□□ -0.18
TUBE1-210ENST00000604967 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
TUBE1-210ENST00000604967 WWC1Q8IX03 1113 aa13.94□□□□□ -0.18
TUBE1-210ENST00000604967 SYNE4Q8N205 404 aa13.94□□□□□ -0.18
TUBE1-210ENST00000604967 ZNF526Q8TF50 670 aaPredicted RBP13.94□□□□□ -0.18
TUBE1-210ENST00000604967 C7orf43Q8WVR3 580 aa13.94□□□□□ -0.18
TUBE1-210ENST00000604967 TSR2Q969E8 191 aaKnown RBP13.94□□□□□ -0.18
TUBE1-210ENST00000604967 ZNF652Q9Y2D9 606 aa13.94□□□□□ -0.18
TUBE1-210ENST00000604967 ELL2O00472 640 aaPredicted RBP13.93□□□□□ -0.18
TUBE1-210ENST00000604967 NTSR2O95665 410 aa13.93□□□□□ -0.18
TUBE1-210ENST00000604967 PDE6BP35913 854 aa13.93□□□□□ -0.18
TUBE1-210ENST00000604967 AIMP1Q12904 312 aaKnown RBP13.93□□□□□ -0.18
TUBE1-210ENST00000604967 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
TUBE1-210ENST00000604967 ZNF622Q969S3 477 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■■□□□ 12
TUBE1-210ENST00000604967 SPINK5Q9NQ38 1064 aaPredicted RBP13.93□□□□□ -0.18
TUBE1-210ENST00000604967 DDX21Q9NR30 783 aaKnown RBP eCLIP13.93□□□□□ -0.18
TUBE1-210ENST00000604967 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
TUBE1-210ENST00000604967 C21orf2O43822 256 aa13.92□□□□□ -0.18
TUBE1-210ENST00000604967 CCDC27Q2M243 656 aa13.92□□□□□ -0.18
TUBE1-210ENST00000604967 HDGFL1Q5TGJ6 251 aa13.92□□□□□ -0.18
TUBE1-210ENST00000604967 KIF6Q6ZMV9 814 aa13.92□□□□□ -0.18
TUBE1-210ENST00000604967 SNED1Q8TER0 1413 aa13.91□□□□□ -0.18
TUBE1-210ENST00000604967 HOXB7P09629 217 aa13.91□□□□□ -0.18
TUBE1-210ENST00000604967 ST5P78524 1137 aa13.91□□□□□ -0.18
TUBE1-210ENST00000604967 CRY2Q49AN0 593 aa13.91□□□□□ -0.18
TUBE1-210ENST00000604967 STYK1Q6J9G0 422 aa13.91□□□□□ -0.18
TUBE1-210ENST00000604967 PRPF40BQ6NWY9 871 aaKnown RBP13.91□□□□□ -0.18
TUBE1-210ENST00000604967 CACNA1SQ13698 1873 aa13.91□□□□□ -0.18
TUBE1-210ENST00000604967 KIF3CO14782 793 aa13.9□□□□□ -0.18
TUBE1-210ENST00000604967 GNAI1P63096 354 aa13.9□□□□□ -0.18
TUBE1-210ENST00000604967 TPTE2Q6XPS3 522 aa13.9□□□□□ -0.18
TUBE1-210ENST00000604967 NLRP10Q86W26 655 aa13.9□□□□□ -0.18
TUBE1-210ENST00000604967 PHAXQ9H814 394 aaKnown RBP13.9□□□□□ -0.18
TUBE1-210ENST00000604967 SALL2Q9Y467 1007 aaPredicted RBP13.9□□□□□ -0.18
TUBE1-210ENST00000604967 IBTKQ9P2D0 1353 aaPredicted RBP13.9□□□□□ -0.18
TUBE1-210ENST00000604967 COL4A1P02462 1669 aa13.9□□□□□ -0.18
TUBE1-210ENST00000604967 ARFGEF2Q9Y6D5 1785 aa13.9□□□□□ -0.18
TUBE1-210ENST00000604967 FER1L6Q2WGJ9 1857 aa13.9□□□□□ -0.18
TUBE1-210ENST00000604967 ANKRD36CQ5JPF3 1778 aa13.89□□□□□ -0.19
TUBE1-210ENST00000604967 C1QTNF8P60827 252 aa13.89□□□□□ -0.19
TUBE1-210ENST00000604967 MASTLQ96GX5 879 aa13.89□□□□□ -0.19
TUBE1-210ENST00000604967 NMRK2Q9NPI5 230 aa13.89□□□□□ -0.19
TUBE1-210ENST00000604967 RNF181Q9P0P0 153 aa13.89□□□□□ -0.19
TUBE1-210ENST00000604967 TCERG1O14776 1098 aaKnown RBP13.88□□□□□ -0.19
TUBE1-210ENST00000604967 NPR1P16066 1061 aa13.88□□□□□ -0.19
TUBE1-210ENST00000604967 TCIRG1Q13488 830 aa13.88□□□□□ -0.19
TUBE1-210ENST00000604967 RIC1Q4ADV7 1423 aa13.88□□□□□ -0.19
TUBE1-210ENST00000604967 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 224.8 ms