RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 RFC4P35249 363 aa10.31□□□□□ -0.76
NOLC1-208ENST00000603946 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.762e-14■■■■■ 27.9
NOLC1-208ENST00000603946 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
NOLC1-208ENST00000603946 RTCBQ9Y3I0 505 aaKnown RBP10.31□□□□□ -0.76
NOLC1-208ENST00000603946 SCN11AQ9UI33 1791 aa10.31□□□□□ -0.76
NOLC1-208ENST00000603946 PKD1L3Q7Z443 1732 aa10.31□□□□□ -0.76
NOLC1-208ENST00000603946 CHMP3Q9Y3E7 222 aa10.31□□□□□ -0.76
NOLC1-208ENST00000603946 VIRMAQ69YN4 1812 aaKnown RBP10.31□□□□□ -0.76
NOLC1-208ENST00000603946 BAG6P46379 1132 aa10.3□□□□□ -0.76
NOLC1-208ENST00000603946 SLC51AQ86UW1 340 aa10.3□□□□□ -0.76
NOLC1-208ENST00000603946 KLHDC4Q8TBB5 520 aa10.3□□□□□ -0.76
NOLC1-208ENST00000603946 DNAAF4Q8WXU2 420 aa10.3□□□□□ -0.76
NOLC1-208ENST00000603946 TRAPPC3LQ5T215 181 aa10.3□□□□□ -0.76
NOLC1-208ENST00000603946 UBE3BQ7Z3V4 1068 aa10.3□□□□□ -0.76
NOLC1-208ENST00000603946 LRP10Q7Z4F1 713 aa10.3□□□□□ -0.76
NOLC1-208ENST00000603946 HCLS1P14317 486 aaPredicted RBP10.29□□□□□ -0.76
NOLC1-208ENST00000603946 COL23A1Q86Y22 540 aaPredicted RBP10.29□□□□□ -0.76
NOLC1-208ENST00000603946 CAMKK2Q96RR4 588 aa10.29□□□□□ -0.76
NOLC1-208ENST00000603946 HYPKQ9NX55 129 aa10.29□□□□□ -0.76
NOLC1-208ENST00000603946 C9orf78Q9NZ63 289 aaPredicted RBP10.29□□□□□ -0.76
NOLC1-208ENST00000603946 NIP7Q9Y221 180 aaKnown RBP eCLIP10.29□□□□□ -0.76
NOLC1-208ENST00000603946 IPO8O15397 1037 aaKnown RBP10.29□□□□□ -0.76
NOLC1-208ENST00000603946 ZPR1O75312 459 aa10.29□□□□□ -0.76
NOLC1-208ENST00000603946 IGKV5-2P06315 115 aa10.29□□□□□ -0.76
NOLC1-208ENST00000603946 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.29□□□□□ -0.76
NOLC1-208ENST00000603946 THSD7AQ9UPZ6 1657 aa10.29□□□□□ -0.76
NOLC1-208ENST00000603946 GTF2E1P29083 439 aaPredicted RBP10.29□□□□□ -0.76
NOLC1-208ENST00000603946 ALDH1L2Q3SY69 923 aa10.29□□□□□ -0.76
NOLC1-208ENST00000603946 KIF6Q6ZMV9 814 aa10.29□□□□□ -0.76
NOLC1-208ENST00000603946 A0A087WZG4 1122 aa10.28□□□□□ -0.76
NOLC1-208ENST00000603946 ADCY9O60503 1353 aa10.28□□□□□ -0.76
NOLC1-208ENST00000603946 EIF5P55010 431 aaKnown RBP10.28□□□□□ -0.76
NOLC1-208ENST00000603946 TBC1D9BQ66K14 1250 aa10.28□□□□□ -0.76
NOLC1-208ENST00000603946 KSR2Q6VAB6 950 aa10.28□□□□□ -0.76
NOLC1-208ENST00000603946 KCPQ6ZWJ8 1503 aa10.28□□□□□ -0.76
NOLC1-208ENST00000603946 PCDHB15Q9Y5E8 787 aa10.28□□□□□ -0.76
NOLC1-208ENST00000603946 MYH14Q7Z406 1995 aaKnown RBP10.28□□□□□ -0.76
NOLC1-208ENST00000603946 ZBTB22O15209 634 aa10.28□□□□□ -0.76
NOLC1-208ENST00000603946 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
NOLC1-208ENST00000603946 BABAM1Q9NWV8 329 aa10.28□□□□□ -0.76
NOLC1-208ENST00000603946 SRCIN1Q9C0H9 1055 aa10.27□□□□□ -0.77
NOLC1-208ENST00000603946 ZNF219Q9P2Y4 722 aaPredicted RBP10.27□□□□□ -0.77
NOLC1-208ENST00000603946 KIF16BQ96L93 1317 aa10.27□□□□□ -0.77
NOLC1-208ENST00000603946 CCDC136Q96JN2 1154 aa10.27□□□□□ -0.77
NOLC1-208ENST00000603946 TEX13AQ9BXU3 409 aaPredicted RBP10.27□□□□□ -0.77
NOLC1-208ENST00000603946 SIL1Q9H173 461 aa10.27□□□□□ -0.77
NOLC1-208ENST00000603946 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
NOLC1-208ENST00000603946 BTAF1O14981 1849 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 MVPQ14764 893 aaKnown RBP10.26□□□□□ -0.77
NOLC1-208ENST00000603946 VSIG10Q8N0Z9 540 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 USP44Q9H0E7 712 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 TRMT112Q9UI30 125 aaKnown RBP10.26□□□□□ -0.77
NOLC1-208ENST00000603946 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.26□□□□□ -0.77
NOLC1-208ENST00000603946 PLSCR1O15162 318 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 DDX58O95786 925 aaKnown RBP10.26□□□□□ -0.77
NOLC1-208ENST00000603946 IGHDP01880 384 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 EPHA10Q5JZY3 1008 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 BEND3Q5T5X7 828 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 SUSD4Q5VX71 490 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 API5Q9BZZ5 524 aaKnown RBP10.26□□□□□ -0.77
NOLC1-208ENST00000603946 RPS6KA4O75676 772 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 NEXNQ0ZGT2 675 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 BCL2L12Q9HB09 334 aa10.26□□□□□ -0.77
NOLC1-208ENST00000603946 C5P01031 1676 aa10.25□□□□□ -0.77
NOLC1-208ENST00000603946 IL6STP40189 918 aaPredicted RBP10.25□□□□□ -0.77
NOLC1-208ENST00000603946 PA2G4Q9UQ80 394 aaKnown RBP10.25□□□□□ -0.77
NOLC1-208ENST00000603946 COL15A1P39059 1388 aa10.25□□□□□ -0.77
NOLC1-208ENST00000603946 UBN2Q6ZU65 1347 aa10.25□□□□□ -0.77
NOLC1-208ENST00000603946 ZBTB7BO15156 539 aaPredicted RBP10.25□□□□□ -0.77
NOLC1-208ENST00000603946 SLC15A2Q16348 729 aa10.25□□□□□ -0.77
NOLC1-208ENST00000603946 PLBD2Q8NHP8 589 aa10.25□□□□□ -0.77
NOLC1-208ENST00000603946 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
NOLC1-208ENST00000603946 NEURL1BA8MQ27 555 aa10.24□□□□□ -0.77
NOLC1-208ENST00000603946 CAMTA2O94983 1202 aa10.24□□□□□ -0.77
NOLC1-208ENST00000603946 METTL22Q9BUU2 404 aaPredicted RBP10.24□□□□□ -0.77
NOLC1-208ENST00000603946 HOXB7P09629 217 aa10.24□□□□□ -0.77
NOLC1-208ENST00000603946 SOS1Q07889 1333 aaPredicted RBP10.24□□□□□ -0.77
NOLC1-208ENST00000603946 MAP3K15Q6ZN16 1313 aa10.24□□□□□ -0.77
NOLC1-208ENST00000603946 WNK3Q9BYP7 1800 aa10.24□□□□□ -0.77
NOLC1-208ENST00000603946 PNMA6EA0A0J9YXQ4 647 aa10.24□□□□□ -0.77
NOLC1-208ENST00000603946 SNAP23O00161 211 aa10.24□□□□□ -0.77
NOLC1-208ENST00000603946 CT47B1P0C2W7 299 aaPredicted RBP10.24□□□□□ -0.77
NOLC1-208ENST00000603946 C3orf67Q6ZVT6 689 aa10.24□□□□□ -0.77
NOLC1-208ENST00000603946 STK32BQ9NY57 414 aa10.24□□□□□ -0.77
NOLC1-208ENST00000603946 UBTFL1P0CB47 393 aaPredicted RBP10.23□□□□□ -0.77
NOLC1-208ENST00000603946 TCIRG1Q13488 830 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 NFIXQ14938 502 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 SUCLG2Q96I99 432 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 EXOC6BQ9Y2D4 811 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 MRC1P22897 1456 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 GYS1P13807 737 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 GCKRQ14397 625 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 ERFEQ4G0M1 354 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
NOLC1-208ENST00000603946 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 PNPLA7Q6ZV29 1317 aa10.23□□□□□ -0.77
NOLC1-208ENST00000603946 WTIPA6NIX2 430 aaPredicted RBP10.22□□□□□ -0.77
NOLC1-208ENST00000603946 SMARCA5O60264 1052 aaPredicted RBP10.22□□□□□ -0.77
NOLC1-208ENST00000603946 MMP10P09238 476 aa10.22□□□□□ -0.77
NOLC1-208ENST00000603946 NBPF5PQ86XG9 351 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 500.8 ms