RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 NAT1P18440 290 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 SSR1P43307 286 aaKnown RBP5.71□□□□□ -1.5
LINC01109-201ENST00000603837 GTF2A1P52655 376 aaPredicted RBP5.71□□□□□ -1.5
LINC01109-201ENST00000603837 RRP1P56182 461 aaKnown RBP5.71□□□□□ -1.5
LINC01109-201ENST00000603837 U2AF1Q01081 240 aaKnown RBP eCLIP5.71□□□□□ -1.5
LINC01109-201ENST00000603837 GABPB1Q06547 395 aaPredicted RBP5.71□□□□□ -1.5
LINC01109-201ENST00000603837 CT47A1Q5JQC4 288 aaPredicted RBP5.71□□□□□ -1.5
LINC01109-201ENST00000603837 NLGN1Q8N2Q7 840 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 MICALL1Q8N3F8 863 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 UBXN4Q92575 508 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 TBC1D2Q9BYX2 928 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 NUB1Q9Y5A7 615 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 CFAP74Q9C0B2 1584 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 RRM1P23921 792 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 COPS2P61201 443 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 C8orf34Q49A92 452 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 NBPF10Q6P3W6 841 aaKnown RBP5.7□□□□□ -1.5
LINC01109-201ENST00000603837 ENOX1Q8TC92 643 aaKnown RBP5.7□□□□□ -1.5
LINC01109-201ENST00000603837 DHX38Q92620 1227 aaKnown RBP5.7□□□□□ -1.5
LINC01109-201ENST00000603837 SPACA7Q96KW9 195 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 RPS6KC1Q96S38 1066 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 RBM47A0AV96 593 aaKnown RBP5.7□□□□□ -1.5
LINC01109-201ENST00000603837 PES1O00541 588 aaKnown RBP5.7□□□□□ -1.5
LINC01109-201ENST00000603837 CCT2P78371 535 aaKnown RBP5.7□□□□□ -1.5
LINC01109-201ENST00000603837 ZRSR2Q15696 482 aaKnown RBP5.7□□□□□ -1.5
LINC01109-201ENST00000603837 AMOTL1Q8IY63 956 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 MYRIPQ8NFW9 859 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 ANTXR1Q9H6X2 564 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 PANK3Q9H999 370 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 KDM6BO15054 1643 aa5.7□□□□□ -1.5
LINC01109-201ENST00000603837 HOXA2O43364 376 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 NAP1L1P55209 391 aaKnown RBP5.69□□□□□ -1.5
LINC01109-201ENST00000603837 HS1BP3Q53T59 392 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 GIPC2Q8TF65 315 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 MTRQ99707 1265 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 NCAPGQ9BPX3 1015 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 CENPOQ9BU64 300 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 SMC4Q9NTJ3 1288 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 COMMD10Q9Y6G5 202 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 MAGI3Q5TCQ9 1506 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 NINLQ9Y2I6 1382 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 E2F5Q15329 346 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 C4orf46Q504U0 113 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 BLOC1S3Q6QNY0 202 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 RPAINQ86UA6 219 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 IRF2BPLQ9H1B7 796 aa5.69□□□□□ -1.5
LINC01109-201ENST00000603837 NOL7Q9UMY1 257 aaKnown RBP5.69□□□□□ -1.5
LINC01109-201ENST00000603837 TCOF1Q13428 1488 aaKnown RBP5.69□□□□□ -1.5
LINC01109-201ENST00000603837 KTN1Q86UP2 1357 aaKnown RBP5.69□□□□□ -1.5
LINC01109-201ENST00000603837 MOXD2PA6NHM9 499 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 CCDC172P0C7W6 258 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 CALRP27797 417 aaKnown RBP5.68□□□□□ -1.5
LINC01109-201ENST00000603837 NASPP49321 788 aaPredicted RBP5.68□□□□□ -1.5
LINC01109-201ENST00000603837 BIRC2Q13490 618 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 CC2D1AQ6P1N0 951 aaPredicted RBP5.68□□□□□ -1.5
LINC01109-201ENST00000603837 PDCL2Q8N4E4 241 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 HLA-CQ95604 372 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 MPHOSPH6Q99547 160 aaKnown RBP5.68□□□□□ -1.5
LINC01109-201ENST00000603837 LNPKQ9C0E8 428 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 UPF2Q9HAU5 1272 aaKnown RBP5.68□□□□□ -1.5
LINC01109-201ENST00000603837 FEZ2Q9UHY8 353 aaPredicted RBP5.68□□□□□ -1.5
LINC01109-201ENST00000603837 SF3A1Q15459 793 aaKnown RBP5.68□□□□□ -1.5
LINC01109-201ENST00000603837 LONRF1Q17RB8 773 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 MORN1Q5T089 497 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 MYSM1Q5VVJ2 828 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 GAS2L3Q86XJ1 694 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 CACTIN-AS1Q8N1I8 211 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 HFM1A2PYH4 1435 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 ABCC2Q92887 1545 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 NR1I2O75469 434 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 LIG1P18858 919 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 NDUFV2P19404 249 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 MECOMQ03112 1051 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 SCUBE3Q8IX30 993 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 PDILTQ8N807 584 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 PIF1Q9H611 641 aa5.68□□□□□ -1.5
LINC01109-201ENST00000603837 IQSEC3Q9UPP2 1182 aaPredicted RBP5.68□□□□□ -1.5
LINC01109-201ENST00000603837 SUPT6HQ7KZ85 1726 aaKnown RBP5.68□□□□□ -1.5
LINC01109-201ENST00000603837 EHBP1L1Q8N3D4 1523 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 MPHOSPH10O00566 681 aaKnown RBP5.67□□□□□ -1.5
LINC01109-201ENST00000603837 TBX4P57082 545 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 GUCA2AQ02747 115 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 PTPROQ16827 1216 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 TJAP1Q5JTD0 557 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 TSC1Q92574 1164 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 CCDC85AQ96PX6 553 aaPredicted RBP5.67□□□□□ -1.5
LINC01109-201ENST00000603837 SLC27A5Q9Y2P5 690 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 DENND4BO75064 1496 aaPredicted RBP5.67□□□□□ -1.5
LINC01109-201ENST00000603837 ENOX2Q16206 610 aaKnown RBP5.67□□□□□ -1.5
LINC01109-201ENST00000603837 RSPH1Q8WYR4 309 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 TRERF1Q96PN7 1200 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 CXorf56Q9H5V9 222 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 IL21Q9HBE4 155 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 POLR3EQ9NVU0 708 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 RAI14Q9P0K7 980 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 IQGAP2Q13576 1575 aa5.67□□□□□ -1.5
LINC01109-201ENST00000603837 FGD6Q6ZV73 1430 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 SLFN14P0C7P3 912 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 FDX1P10109 184 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 U2AF2P26368 475 aaKnown RBP eCLIP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms