RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ANO10Q9NW15 660 aa10.02□□□□□ -0.81
CSMD1-216ENST00000602557 TSC1Q92574 1164 aa10.02□□□□□ -0.81
CSMD1-216ENST00000602557 NUP88Q99567 741 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-216ENST00000602557 CEP126Q9P2H0 1117 aa10.02□□□□□ -0.81
CSMD1-216ENST00000602557 ZEB2O60315 1214 aa10.02□□□□□ -0.81
CSMD1-216ENST00000602557 PLEKHH2Q8IVE3 1493 aa10.02□□□□□ -0.81
CSMD1-216ENST00000602557 NBPF11Q86T75 865 aa10.02□□□□□ -0.81
CSMD1-216ENST00000602557 NAP1L3Q99457 506 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-216ENST00000602557 CEP131Q9UPN4 1083 aa10.02□□□□□ -0.81
CSMD1-216ENST00000602557 SKILP12757 684 aa10.01□□□□□ -0.81
CSMD1-216ENST00000602557 MCM10Q7L590 875 aa10.01□□□□□ -0.81
CSMD1-216ENST00000602557 GSDMDP57764 484 aa10.01□□□□□ -0.81
CSMD1-216ENST00000602557 FBF1Q8TES7 1133 aa10.01□□□□□ -0.81
CSMD1-216ENST00000602557 SPECC1Q5M775 1068 aa10.01□□□□□ -0.81
CSMD1-216ENST00000602557 CC2D2AQ9P2K1 1620 aa10.01□□□□□ -0.81
CSMD1-216ENST00000602557 RBM28Q9NW13 759 aaKnown RBP10.01□□□□□ -0.81
CSMD1-216ENST00000602557 LRSAM1Q6UWE0 723 aa10.01□□□□□ -0.81
CSMD1-216ENST00000602557 PRIM1P49642 420 aaKnown RBP10.01□□□□□ -0.81
CSMD1-216ENST00000602557 GSTTP1A0A1W2PQM5 241 aa10.01□□□□□ -0.81
CSMD1-216ENST00000602557 BUB1BO60566 1050 aaPredicted RBP10□□□□□ -0.81
CSMD1-216ENST00000602557 BICDL1Q6ZP65 573 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 CDK13Q14004 1512 aaKnown RBP10□□□□□ -0.81
CSMD1-216ENST00000602557 PPP1R12BO60237 982 aaPredicted RBP10□□□□□ -0.81
CSMD1-216ENST00000602557 ZSCAN29Q8IWY8 852 aaPredicted RBP10□□□□□ -0.81
CSMD1-216ENST00000602557 DAPK1P53355 1430 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 TMPOP42166 694 aaKnown RBP10□□□□□ -0.81
CSMD1-216ENST00000602557 A0A1B0GUA9 196 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 CCDC186Q7Z3E2 898 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 FEZ1Q99689 392 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 UBA5Q9GZZ9 404 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 SLU7O95391 586 aaKnown RBP10□□□□□ -0.81
CSMD1-216ENST00000602557 GRIN2BQ13224 1484 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 GCOM1H8Y6P7 765 aaPredicted RBP10□□□□□ -0.81
CSMD1-216ENST00000602557 MYZAPP0CAP1 466 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 SETSIPP0DME0 302 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 KIF5BP33176 963 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 DESP17661 470 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 PTGS1P23219 599 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 GOLGA1Q92805 767 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 PPARDQ03181 441 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 KIF14Q15058 1648 aa10□□□□□ -0.81
CSMD1-216ENST00000602557 PRG4Q92954 1404 aaPredicted RBP10□□□□□ -0.81
CSMD1-216ENST00000602557 RHOXF2BP0C7M4 288 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 NFE2L2Q16236 605 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 METTL24Q5JXM2 366 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 FSIP1Q8NA03 581 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 RHOXF2Q9BQY4 288 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 RPAINQ86UA6 219 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 ABCF2Q9UG63 623 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 IGHMBP2P38935 993 aaKnown RBP9.99□□□□□ -0.81
CSMD1-216ENST00000602557 KLHL40Q2TBA0 621 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 DUSP27Q5VZP5 1158 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 CAPZA3Q96KX2 299 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 GOLGA8BA8MQT2 603 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 PRDM11Q9NQV5 511 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-216ENST00000602557 CTNNBL1Q8WYA6 563 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-216ENST00000602557 MACROD2A1Z1Q3 448 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 CCDC96Q2M329 555 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 GCKP35557 465 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 CCDC150Q8NCX0 1101 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 SCAND2PQ9GZW5 306 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-216ENST00000602557 PLEKHH1Q9ULM0 1364 aa9.99□□□□□ -0.81
CSMD1-216ENST00000602557 GNAT3A8MTJ3 354 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 RIOK3O14730 519 aaKnown RBP9.98□□□□□ -0.81
CSMD1-216ENST00000602557 DMTNQ08495 405 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 SSH1Q8WYL5 1049 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 C8orf76Q96K31 380 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 SH2B1Q9NRF2 756 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-216ENST00000602557 NUTM2BA6NNL0 878 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-216ENST00000602557 NUTM2EB1AL46 878 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-216ENST00000602557 UVSSAQ2YD98 709 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 NUTM2AQ8IVF1 878 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-216ENST00000602557 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.98□□□□□ -0.81
CSMD1-216ENST00000602557 MRVI1Q9Y6F6 885 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 PDE1CQ14123 709 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-216ENST00000602557 ANKS4BQ8N8V4 417 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 MINDY4BA8MYZ0 360 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 POTEJP0CG39 1038 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 SLFN5Q08AF3 891 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 JADE2Q9NQC1 790 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 CNPY2Q9Y2B0 182 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 FCHSD2O94868 740 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 GABPB1Q06547 395 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-216ENST00000602557 ELF2Q15723 593 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 BOLA2Q9H3K6 86 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 ATAD2Q6PL18 1390 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 FKBP15Q5T1M5 1219 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 SWAP70Q9UH65 585 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 PAFAH1B1P43034 410 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 KIF1BPQ96EK5 621 aa9.98□□□□□ -0.81
CSMD1-216ENST00000602557 ZNF165P49910 485 aa9.97□□□□□ -0.81
CSMD1-216ENST00000602557 ANAPC15P60006 121 aa9.97□□□□□ -0.81
CSMD1-216ENST00000602557 ANO6Q4KMQ2 910 aa9.97□□□□□ -0.81
CSMD1-216ENST00000602557 VPS36Q86VN1 386 aa9.97□□□□□ -0.81
CSMD1-216ENST00000602557 FAM114A2Q9NRY5 505 aa9.97□□□□□ -0.81
CSMD1-216ENST00000602557 GUCY1B3Q02153 619 aa9.97□□□□□ -0.81
CSMD1-216ENST00000602557 PPM1EQ8WY54 764 aa9.97□□□□□ -0.81
CSMD1-216ENST00000602557 CCDC82Q8N4S0 544 aa9.97□□□□□ -0.81
CSMD1-216ENST00000602557 NSRP1Q9H0G5 558 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms