RNA–Protein interactions for RNA: ENST00000601925.5

SMG9-212, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-212ENST00000601925 IFT57Q9NWB7 429 aa17.43■□□□□ 0.38
SMG9-212ENST00000601925 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
SMG9-212ENST00000601925 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
SMG9-212ENST00000601925 BABAM1Q9NWV8 329 aa17.42■□□□□ 0.38
SMG9-212ENST00000601925 TBC1D2BQ9UPU7 963 aa17.42■□□□□ 0.38
SMG9-212ENST00000601925 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
SMG9-212ENST00000601925 TOMM70O94826 608 aa17.41■□□□□ 0.38
SMG9-212ENST00000601925 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
SMG9-212ENST00000601925 RNF181Q9P0P0 153 aa17.41■□□□□ 0.38
SMG9-212ENST00000601925 USP16Q9Y5T5 823 aa17.41■□□□□ 0.38
SMG9-212ENST00000601925 ANKRD31Q8N7Z5 1873 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 E9PSI1 815 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 CHL1O00533 1208 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 CAMTA2O94983 1202 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 ZNF853P0CG23 659 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 PRELPP51888 382 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
SMG9-212ENST00000601925 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
SMG9-212ENST00000601925 C2CD5Q86YS7 1000 aa17.39■□□□□ 0.37
SMG9-212ENST00000601925 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
SMG9-212ENST00000601925 PCNTO95613 3336 aa17.38■□□□□ 0.37
SMG9-212ENST00000601925 H0YIN7 160 aa17.38■□□□□ 0.37
SMG9-212ENST00000601925 RASSF7Q02833 373 aa17.38■□□□□ 0.37
SMG9-212ENST00000601925 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
SMG9-212ENST00000601925 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
SMG9-212ENST00000601925 ZNF330Q9Y3S2 320 aaPredicted RBP17.38■□□□□ 0.37
SMG9-212ENST00000601925 PIP4K2AP48426 406 aaPredicted RBP17.37■□□□□ 0.37
SMG9-212ENST00000601925 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
SMG9-212ENST00000601925 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
SMG9-212ENST00000601925 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
SMG9-212ENST00000601925 SNRPA1P09661 255 aaKnown RBP17.36■□□□□ 0.37
SMG9-212ENST00000601925 CCDC24Q8N4L8 307 aa17.36■□□□□ 0.37
SMG9-212ENST00000601925 NFKBIEO00221 500 aa17.35■□□□□ 0.37
SMG9-212ENST00000601925 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
SMG9-212ENST00000601925 TRMT2AQ8IZ69 625 aaKnown RBP17.35■□□□□ 0.37
SMG9-212ENST00000601925 RBM46Q8TBY0 533 aaKnown RBP17.35■□□□□ 0.37
SMG9-212ENST00000601925 TSR2Q969E8 191 aaKnown RBP17.35■□□□□ 0.37
SMG9-212ENST00000601925 KDM2BQ8NHM5 1336 aa17.35■□□□□ 0.37
SMG9-212ENST00000601925 NBPF26B4DH59 902 aa17.34■□□□□ 0.37
SMG9-212ENST00000601925 COL11A2P13942 1736 aaPredicted RBP17.34■□□□□ 0.37
SMG9-212ENST00000601925 LMNB1P20700 586 aa17.34■□□□□ 0.37
SMG9-212ENST00000601925 CCDC88AQ3V6T2 1871 aa17.34■□□□□ 0.37
SMG9-212ENST00000601925 NBPF10Q6P3W6 841 aaKnown RBP17.34■□□□□ 0.37
SMG9-212ENST00000601925 NBPF15Q8N660 670 aa17.34■□□□□ 0.37
SMG9-212ENST00000601925 SETDB2Q96T68 719 aa17.34■□□□□ 0.37
SMG9-212ENST00000601925 FANCIQ9NVI1 1328 aa17.34■□□□□ 0.37
SMG9-212ENST00000601925 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
SMG9-212ENST00000601925 ZC3H4Q9UPT8 1303 aaKnown RBP17.34■□□□□ 0.37
SMG9-212ENST00000601925 PDE6BP35913 854 aa17.33■□□□□ 0.36
SMG9-212ENST00000601925 APLP1P51693 650 aa17.33■□□□□ 0.36
SMG9-212ENST00000601925 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
SMG9-212ENST00000601925 DNAJC5GQ8N7S2 189 aa17.33■□□□□ 0.36
SMG9-212ENST00000601925 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
SMG9-212ENST00000601925 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
SMG9-212ENST00000601925 CLEC4GQ6UXB4 293 aa17.32■□□□□ 0.36
SMG9-212ENST00000601925 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
SMG9-212ENST00000601925 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
SMG9-212ENST00000601925 CNBD1Q8NA66 436 aa17.31■□□□□ 0.36
SMG9-212ENST00000601925 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■□□□ 14.2
SMG9-212ENST00000601925 FER1L6Q2WGJ9 1857 aa17.31■□□□□ 0.36
SMG9-212ENST00000601925 GLTPD2A6NH11 291 aa17.3■□□□□ 0.36
SMG9-212ENST00000601925 C21orf2O43822 256 aa17.3■□□□□ 0.36
SMG9-212ENST00000601925 SRGNP10124 158 aa17.3■□□□□ 0.36
SMG9-212ENST00000601925 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
SMG9-212ENST00000601925 SLX4Q8IY92 1834 aa17.3■□□□□ 0.36
SMG9-212ENST00000601925 RGL2O15211 777 aa17.29■□□□□ 0.36
SMG9-212ENST00000601925 FSTL1Q12841 308 aa17.29■□□□□ 0.36
SMG9-212ENST00000601925 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
SMG9-212ENST00000601925 TIAM2Q8IVF5 1701 aa17.28■□□□□ 0.36
SMG9-212ENST00000601925 ST5P78524 1137 aa17.28■□□□□ 0.36
SMG9-212ENST00000601925 STYK1Q6J9G0 422 aa17.28■□□□□ 0.36
SMG9-212ENST00000601925 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
SMG9-212ENST00000601925 C8orf58Q8NAV2 365 aa17.28■□□□□ 0.36
SMG9-212ENST00000601925 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.36
SMG9-212ENST00000601925 KLRG2A4D1S0 409 aaPredicted RBP17.27■□□□□ 0.36
SMG9-212ENST00000601925 KRT24Q2M2I5 525 aa17.27■□□□□ 0.36
SMG9-212ENST00000601925 MASTLQ96GX5 879 aa17.27■□□□□ 0.36
SMG9-212ENST00000601925 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
SMG9-212ENST00000601925 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
SMG9-212ENST00000601925 WDR90Q96KV7 1748 aa17.27■□□□□ 0.35
SMG9-212ENST00000601925 LAMB4A4D0S4 1761 aa17.26■□□□□ 0.35
SMG9-212ENST00000601925 ARFGEF2Q9Y6D5 1785 aa17.26■□□□□ 0.35
SMG9-212ENST00000601925 POTECB2RU33 542 aa17.26■□□□□ 0.35
SMG9-212ENST00000601925 ELL2O00472 640 aaPredicted RBP17.26■□□□□ 0.35
SMG9-212ENST00000601925 HLFQ16534 295 aa17.26■□□□□ 0.35
SMG9-212ENST00000601925 TWISTNBQ3B726 338 aaPredicted RBP17.26■□□□□ 0.35
SMG9-212ENST00000601925 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
SMG9-212ENST00000601925 NBPF5PQ86XG9 351 aaPredicted RBP17.26■□□□□ 0.35
SMG9-212ENST00000601925 C7orf43Q8WVR3 580 aa17.26■□□□□ 0.35
SMG9-212ENST00000601925 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
SMG9-212ENST00000601925 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
SMG9-212ENST00000601925 CACNA1SQ13698 1873 aa17.25■□□□□ 0.35
SMG9-212ENST00000601925 NPHP1O15259 732 aa17.25■□□□□ 0.35
SMG9-212ENST00000601925 HOXB7P09629 217 aa17.25■□□□□ 0.35
SMG9-212ENST00000601925 CT47B1P0C2W7 299 aaPredicted RBP17.25■□□□□ 0.35
SMG9-212ENST00000601925 VEGFAP15692 232 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms