RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
DDX49-211ENST00000601772 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
DDX49-211ENST00000601772 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
DDX49-211ENST00000601772 TAF1DQ9H5J8 278 aaPredicted RBP11.28□□□□□ -0.6
DDX49-211ENST00000601772 RNMTO43148 476 aaKnown RBP11.27□□□□□ -0.61
DDX49-211ENST00000601772 AOC2O75106 756 aa11.27□□□□□ -0.61
DDX49-211ENST00000601772 U2AF1L5P0DN76 240 aaPredicted RBP11.27□□□□□ -0.61
DDX49-211ENST00000601772 PRKAR2BP31323 418 aa11.27□□□□□ -0.61
DDX49-211ENST00000601772 U2AF1Q01081 240 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDX49-211ENST00000601772 HABP4Q5JVS0 413 aaKnown RBP11.27□□□□□ -0.61
DDX49-211ENST00000601772 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
DDX49-211ENST00000601772 LGR6Q9HBX8 967 aa11.27□□□□□ -0.61
DDX49-211ENST00000601772 MRS2Q9HD23 443 aa11.27□□□□□ -0.61
DDX49-211ENST00000601772 POLRMTO00411 1230 aaKnown RBP11.26□□□□□ -0.61
DDX49-211ENST00000601772 RALBP1Q15311 655 aa11.26□□□□□ -0.61
DDX49-211ENST00000601772 GAS2L2Q8NHY3 880 aa11.26□□□□□ -0.61
DDX49-211ENST00000601772 PHACTR3Q96KR7 559 aa11.26□□□□□ -0.61
DDX49-211ENST00000601772 SLC52A2Q9HAB3 445 aa11.26□□□□□ -0.61
DDX49-211ENST00000601772 DICER1Q9UPY3 1922 aaKnown RBP11.25□□□□□ -0.61
DDX49-211ENST00000601772 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
DDX49-211ENST00000601772 DLL1O00548 723 aa11.25□□□□□ -0.61
DDX49-211ENST00000601772 RPS6KA4O75676 772 aa11.25□□□□□ -0.61
DDX49-211ENST00000601772 CNTROBQ8N137 903 aa11.25□□□□□ -0.61
DDX49-211ENST00000601772 NBPF15Q8N660 670 aa11.25□□□□□ -0.61
DDX49-211ENST00000601772 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
DDX49-211ENST00000601772 DLEC1Q9Y238 1755 aa11.24□□□□□ -0.61
DDX49-211ENST00000601772 CA12O43570 354 aa11.24□□□□□ -0.61
DDX49-211ENST00000601772 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
DDX49-211ENST00000601772 MYBBP1AQ9BQG0 1328 aaKnown RBP11.24□□□□□ -0.61
DDX49-211ENST00000601772 CNTNAP4Q9C0A0 1308 aa11.24□□□□□ -0.61
DDX49-211ENST00000601772 SCN4AP35499 1836 aa11.23□□□□□ -0.61
DDX49-211ENST00000601772 C21orf2O43822 256 aa11.23□□□□□ -0.61
DDX49-211ENST00000601772 PTCD1O75127 700 aaKnown RBP11.23□□□□□ -0.61
DDX49-211ENST00000601772 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
DDX49-211ENST00000601772 IL17REQ8NFR9 667 aa11.23□□□□□ -0.61
DDX49-211ENST00000601772 RNF123Q5XPI4 1314 aa11.23□□□□□ -0.61
DDX49-211ENST00000601772 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
DDX49-211ENST00000601772 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
DDX49-211ENST00000601772 SLC39A6Q13433 755 aa11.22□□□□□ -0.61
DDX49-211ENST00000601772 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
DDX49-211ENST00000601772 L3MBTL3Q96JM7 780 aaPredicted RBP11.22□□□□□ -0.61
DDX49-211ENST00000601772 TAOK3Q9H2K8 898 aa11.22□□□□□ -0.61
DDX49-211ENST00000601772 DDX21Q9NR30 783 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDX49-211ENST00000601772 HACL1Q9UJ83 578 aa11.22□□□□□ -0.61
DDX49-211ENST00000601772 CEMIPQ8WUJ3 1361 aa11.21□□□□□ -0.61
DDX49-211ENST00000601772 EPHX2P34913 555 aa11.21□□□□□ -0.61
DDX49-211ENST00000601772 FMR1Q06787 632 aaKnown RBP eCLIP11.21□□□□□ -0.61
DDX49-211ENST00000601772 TEFQ10587 303 aa11.21□□□□□ -0.61
DDX49-211ENST00000601772 ZNF622Q969S3 477 aaKnown RBP eCLIP11.21□□□□□ -0.61
DDX49-211ENST00000601772 ADAMTSL1Q8N6G6 1762 aa11.21□□□□□ -0.62
DDX49-211ENST00000601772 H0YIN7 160 aa11.2□□□□□ -0.62
DDX49-211ENST00000601772 MAP2K2P36507 400 aa11.2□□□□□ -0.62
DDX49-211ENST00000601772 AFDNP55196 1824 aaKnown RBP11.2□□□□□ -0.62
DDX49-211ENST00000601772 LAMB4A4D0S4 1761 aa11.2□□□□□ -0.62
DDX49-211ENST00000601772 FER1L6Q2WGJ9 1857 aa11.19□□□□□ -0.62
DDX49-211ENST00000601772 NEFMP07197 916 aa11.19□□□□□ -0.62
DDX49-211ENST00000601772 TM4SF1P30408 202 aa11.19□□□□□ -0.62
DDX49-211ENST00000601772 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
DDX49-211ENST00000601772 PNMA8AQ86V59 439 aaPredicted RBP11.19□□□□□ -0.62
DDX49-211ENST00000601772 PLEKHF1Q96S99 279 aa11.19□□□□□ -0.62
DDX49-211ENST00000601772 ZNF541Q9H0D2 1346 aa11.18□□□□□ -0.62
DDX49-211ENST00000601772 ZPR1O75312 459 aa11.18□□□□□ -0.62
DDX49-211ENST00000601772 CRKLP46109 303 aaKnown RBP11.18□□□□□ -0.62
DDX49-211ENST00000601772 FXR1P51114 621 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDX49-211ENST00000601772 CIAPIN1Q6FI81 312 aa11.18□□□□□ -0.62
DDX49-211ENST00000601772 MCM10Q7L590 875 aa11.18□□□□□ -0.62
DDX49-211ENST00000601772 DNAJC10Q8IXB1 793 aa11.18□□□□□ -0.62
DDX49-211ENST00000601772 TTC5Q8N0Z6 440 aa11.18□□□□□ -0.62
DDX49-211ENST00000601772 RTF1Q92541 710 aaKnown RBP11.18□□□□□ -0.62
DDX49-211ENST00000601772 CARMIL3Q8ND23 1372 aa11.17□□□□□ -0.62
DDX49-211ENST00000601772 MAPK8IP3Q9UPT6 1336 aa11.17□□□□□ -0.62
DDX49-211ENST00000601772 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
DDX49-211ENST00000601772 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
DDX49-211ENST00000601772 DCTN1Q14203 1278 aa11.17□□□□□ -0.62
DDX49-211ENST00000601772 ZNF790Q6PG37 636 aa11.17□□□□□ -0.62
DDX49-211ENST00000601772 FAM9BQ8IZU0 186 aa11.17□□□□□ -0.62
DDX49-211ENST00000601772 PNNQ9H307 717 aaKnown RBP11.17□□□□□ -0.62
DDX49-211ENST00000601772 TLL2Q9Y6L7 1015 aa11.17□□□□□ -0.62
DDX49-211ENST00000601772 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
DDX49-211ENST00000601772 LTBP3Q9NS15 1303 aa11.16□□□□□ -0.62
DDX49-211ENST00000601772 BTBD11A6QL63 1104 aa11.16□□□□□ -0.62
DDX49-211ENST00000601772 TRAF5O00463 557 aa11.16□□□□□ -0.62
DDX49-211ENST00000601772 SERPINB2P05120 415 aa11.16□□□□□ -0.62
DDX49-211ENST00000601772 CYP19A1P11511 503 aaPredicted RBP11.16□□□□□ -0.62
DDX49-211ENST00000601772 NFIXQ14938 502 aa11.16□□□□□ -0.62
DDX49-211ENST00000601772 NFE2L2Q16236 605 aa11.16□□□□□ -0.62
DDX49-211ENST00000601772 INTS5Q6P9B9 1019 aaKnown RBP11.16□□□□□ -0.62
DDX49-211ENST00000601772 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
DDX49-211ENST00000601772 BCORQ6W2J9 1755 aa11.16□□□□□ -0.62
DDX49-211ENST00000601772 SCN7AQ01118 1682 aa11.15□□□□□ -0.62
DDX49-211ENST00000601772 KCNQ3O43525 872 aa11.15□□□□□ -0.62
DDX49-211ENST00000601772 BICDL1Q6ZP65 573 aa11.15□□□□□ -0.62
DDX49-211ENST00000601772 SLC17A8Q8NDX2 589 aa11.15□□□□□ -0.62
DDX49-211ENST00000601772 ZNF496Q96IT1 587 aaPredicted RBP11.15□□□□□ -0.62
DDX49-211ENST00000601772 TRPM7Q96QT4 1865 aa11.15□□□□□ -0.63
DDX49-211ENST00000601772 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
DDX49-211ENST00000601772 CST9Q5W186 159 aa11.14□□□□□ -0.63
DDX49-211ENST00000601772 FMNL2Q96PY5 1086 aa11.14□□□□□ -0.63
DDX49-211ENST00000601772 NRXN2Q9P2S2 1712 aa11.14□□□□□ -0.63
DDX49-211ENST00000601772 CACNA1SQ13698 1873 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms