RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PHAXQ9H814 394 aaKnown RBP17.74■□□□□ 0.43
VRK3-219ENST00000600137 MAP3K15Q6ZN16 1313 aa17.73■□□□□ 0.43
VRK3-219ENST00000600137 NUP98P52948 1817 aa17.73■□□□□ 0.43
VRK3-219ENST00000600137 ERVV-1B6SEH8 477 aa17.73■□□□□ 0.43
VRK3-219ENST00000600137 RGL2O15211 777 aa17.73■□□□□ 0.43
VRK3-219ENST00000600137 MMP10P09238 476 aa17.73■□□□□ 0.43
VRK3-219ENST00000600137 NFIXQ14938 502 aa17.73■□□□□ 0.43
VRK3-219ENST00000600137 TBC1D9BQ66K14 1250 aa17.73■□□□□ 0.43
VRK3-219ENST00000600137 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
VRK3-219ENST00000600137 HYPKQ9NX55 129 aa17.73■□□□□ 0.43
VRK3-219ENST00000600137 G2E3Q7L622 706 aa17.72■□□□□ 0.43
VRK3-219ENST00000600137 ARXQ96QS3 562 aa17.72■□□□□ 0.43
VRK3-219ENST00000600137 CACNA1FO60840 1977 aa17.71■□□□□ 0.43
VRK3-219ENST00000600137 POLRMTO00411 1230 aaKnown RBP17.71■□□□□ 0.43
VRK3-219ENST00000600137 SLC4A2P04920 1241 aa17.7■□□□□ 0.42
VRK3-219ENST00000600137 POLD1P28340 1107 aa17.7■□□□□ 0.42
VRK3-219ENST00000600137 AIMP1Q12904 312 aaKnown RBP17.7■□□□□ 0.42
VRK3-219ENST00000600137 GIGYF2Q6Y7W6 1299 aaKnown RBP17.7■□□□□ 0.42
VRK3-219ENST00000600137 NPM2Q86SE8 214 aaKnown RBP17.7■□□□□ 0.42
VRK3-219ENST00000600137 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
VRK3-219ENST00000600137 ZBTB3Q9H5J0 574 aa17.7■□□□□ 0.42
VRK3-219ENST00000600137 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
VRK3-219ENST00000600137 NRXN2Q9P2S2 1712 aa17.69■□□□□ 0.42
VRK3-219ENST00000600137 ANKRD13DQ6ZTN6 518 aa17.68■□□□□ 0.42
VRK3-219ENST00000600137 ZNF34Q8IZ26 560 aa17.68■□□□□ 0.42
VRK3-219ENST00000600137 KIF6Q6ZMV9 814 aa17.67■□□□□ 0.42
VRK3-219ENST00000600137 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
VRK3-219ENST00000600137 PLBD2Q8NHP8 589 aa17.67■□□□□ 0.42
VRK3-219ENST00000600137 ATP10DQ9P241 1426 aa17.66■□□□□ 0.42
VRK3-219ENST00000600137 SERPINB2P05120 415 aa17.66■□□□□ 0.42
VRK3-219ENST00000600137 MRPL50Q8N5N7 158 aaKnown RBP17.66■□□□□ 0.42
VRK3-219ENST00000600137 SSH1Q8WYL5 1049 aa17.66■□□□□ 0.42
VRK3-219ENST00000600137 STK31Q9BXU1 1019 aa17.66■□□□□ 0.42
VRK3-219ENST00000600137 UBN2Q6ZU65 1347 aa17.66■□□□□ 0.42
VRK3-219ENST00000600137 KIF13BQ9NQT8 1826 aa17.65■□□□□ 0.42
VRK3-219ENST00000600137 CT47B1P0C2W7 299 aaPredicted RBP17.65■□□□□ 0.42
VRK3-219ENST00000600137 TCIRG1Q13488 830 aa17.65■□□□□ 0.42
VRK3-219ENST00000600137 FHDC1Q9C0D6 1143 aaPredicted RBP17.65■□□□□ 0.42
VRK3-219ENST00000600137 ZNF652Q9Y2D9 606 aa17.65■□□□□ 0.42
VRK3-219ENST00000600137 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
VRK3-219ENST00000600137 ADCY9O60503 1353 aa17.65■□□□□ 0.42
VRK3-219ENST00000600137 FLIIQ13045 1269 aa17.64■□□□□ 0.41
VRK3-219ENST00000600137 ZNF428Q96B54 188 aa17.64■□□□□ 0.41
VRK3-219ENST00000600137 SETDB2Q96T68 719 aa17.64■□□□□ 0.41
VRK3-219ENST00000600137 SYT17Q9BSW7 474 aa17.64■□□□□ 0.41
VRK3-219ENST00000600137 ISCA1Q9BUE6 129 aa17.64■□□□□ 0.41
VRK3-219ENST00000600137 NIP7Q9Y221 180 aaKnown RBP eCLIP17.64■□□□□ 0.41
VRK3-219ENST00000600137 ARFGEF2Q9Y6D5 1785 aa17.63■□□□□ 0.41
VRK3-219ENST00000600137 ALDH1L2Q3SY69 923 aa17.63■□□□□ 0.41
VRK3-219ENST00000600137 KSR2Q6VAB6 950 aa17.63■□□□□ 0.41
VRK3-219ENST00000600137 CARMIL3Q8ND23 1372 aa17.63■□□□□ 0.41
VRK3-219ENST00000600137 ANKRD36CQ5JPF3 1778 aa17.63■□□□□ 0.41
VRK3-219ENST00000600137 C10orf71Q711Q0 1435 aa17.63■□□□□ 0.41
VRK3-219ENST00000600137 KIAA1551Q9HCM1 1747 aa17.62■□□□□ 0.41
VRK3-219ENST00000600137 PI4KAP2A4QPH2 592 aa17.62■□□□□ 0.41
VRK3-219ENST00000600137 GPTP24298 496 aa17.62■□□□□ 0.41
VRK3-219ENST00000600137 RARSP54136 660 aaKnown RBP17.62■□□□□ 0.41
VRK3-219ENST00000600137 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
VRK3-219ENST00000600137 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
VRK3-219ENST00000600137 PRR5LQ6MZQ0 368 aa17.62■□□□□ 0.41
VRK3-219ENST00000600137 PI4KAP1Q8N8J0 262 aa17.62■□□□□ 0.41
VRK3-219ENST00000600137 PPP1R1BQ9UD71 204 aaPredicted RBP17.62■□□□□ 0.41
VRK3-219ENST00000600137 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
VRK3-219ENST00000600137 BRPF1P55201 1214 aaPredicted RBP17.61■□□□□ 0.41
VRK3-219ENST00000600137 RIC3Q7Z5B4 369 aa17.61■□□□□ 0.41
VRK3-219ENST00000600137 NLRP10Q86W26 655 aa17.61■□□□□ 0.41
VRK3-219ENST00000600137 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
VRK3-219ENST00000600137 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
VRK3-219ENST00000600137 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
VRK3-219ENST00000600137 CCDC24Q8N4L8 307 aa17.6■□□□□ 0.41
VRK3-219ENST00000600137 METTL22Q9BUU2 404 aaPredicted RBP17.6■□□□□ 0.41
VRK3-219ENST00000600137 MAP3K2Q9Y2U5 619 aa17.6■□□□□ 0.41
VRK3-219ENST00000600137 ATP5J2-PTCD1G3V325 749 aa17.59■□□□□ 0.41
VRK3-219ENST00000600137 NTSR2O95665 410 aa17.59■□□□□ 0.41
VRK3-219ENST00000600137 IGKV5-2P06315 115 aa17.59■□□□□ 0.41
VRK3-219ENST00000600137 KCNA3P22001 575 aa17.59■□□□□ 0.41
VRK3-219ENST00000600137 BCL2L13Q9BXK5 485 aa17.59■□□□□ 0.41
VRK3-219ENST00000600137 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
VRK3-219ENST00000600137 PARP10Q53GL7 1025 aa17.58■□□□□ 0.4
VRK3-219ENST00000600137 MYD88Q99836 296 aa17.58■□□□□ 0.4
VRK3-219ENST00000600137 IBTKQ9P2D0 1353 aaPredicted RBP17.57■□□□□ 0.4
VRK3-219ENST00000600137 FAM177BA6PVY3 158 aa17.57■□□□□ 0.4
VRK3-219ENST00000600137 F6X3S4 739 aa17.57■□□□□ 0.4
VRK3-219ENST00000600137 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
VRK3-219ENST00000600137 TPTE2Q6XPS3 522 aa17.57■□□□□ 0.4
VRK3-219ENST00000600137 NBPF5PQ86XG9 351 aaPredicted RBP17.57■□□□□ 0.4
VRK3-219ENST00000600137 SYNE4Q8N205 404 aa17.57■□□□□ 0.4
VRK3-219ENST00000600137 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
VRK3-219ENST00000600137 KLRG2A4D1S0 409 aaPredicted RBP17.56■□□□□ 0.4
VRK3-219ENST00000600137 TGFB2P61812 414 aa17.56■□□□□ 0.4
VRK3-219ENST00000600137 SLC10A5Q5PT55 438 aa17.56■□□□□ 0.4
VRK3-219ENST00000600137 NUTM1Q86Y26 1132 aa17.56■□□□□ 0.4
VRK3-219ENST00000600137 CNBD1Q8NA66 436 aa17.56■□□□□ 0.4
VRK3-219ENST00000600137 DNAAF4Q8WXU2 420 aa17.56■□□□□ 0.4
VRK3-219ENST00000600137 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
VRK3-219ENST00000600137 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
VRK3-219ENST00000600137 N4BP2Q86UW6 1770 aaPredicted RBP17.56■□□□□ 0.4
VRK3-219ENST00000600137 ABCC12Q96J65 1359 aa17.55■□□□□ 0.4
VRK3-219ENST00000600137 BCAR3O75815 825 aa17.55■□□□□ 0.4
VRK3-219ENST00000600137 ERFEQ4G0M1 354 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms