RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 KDRP35968 1356 aa23.09■■□□□ 1.29
ARHGEF1-218ENST00000599589 LIMCH1Q9UPQ0 1083 aa23.09■■□□□ 1.29
ARHGEF1-218ENST00000599589 PTGS1P23219 599 aa23.09■■□□□ 1.29
ARHGEF1-218ENST00000599589 NUTM1Q86Y26 1132 aa23.09■■□□□ 1.29
ARHGEF1-218ENST00000599589 EYA1Q99502 592 aa23.09■■□□□ 1.29
ARHGEF1-218ENST00000599589 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.29
ARHGEF1-218ENST00000599589 RASEFQ8IZ41 740 aa23.08■■□□□ 1.29
ARHGEF1-218ENST00000599589 RAD50Q92878 1312 aa23.08■■□□□ 1.29
ARHGEF1-218ENST00000599589 EPB41L2O43491 1005 aaKnown RBP23.08■■□□□ 1.28
ARHGEF1-218ENST00000599589 GNAI3P08754 354 aa23.08■■□□□ 1.28
ARHGEF1-218ENST00000599589 NUTM2GQ5VZR2 741 aa23.08■■□□□ 1.28
ARHGEF1-218ENST00000599589 CCDC192P0DO97 292 aa23.07■■□□□ 1.28
ARHGEF1-218ENST00000599589 TSPYL4Q9UJ04 414 aa23.07■■□□□ 1.28
ARHGEF1-218ENST00000599589 LARGE1O95461 756 aa23.07■■□□□ 1.28
ARHGEF1-218ENST00000599589 CPA1P15085 419 aa23.07■■□□□ 1.28
ARHGEF1-218ENST00000599589 LRRFIP2Q9Y608 721 aaKnown RBP23.06■■□□□ 1.28
ARHGEF1-218ENST00000599589 HOXC9P31274 260 aa23.06■■□□□ 1.28
ARHGEF1-218ENST00000599589 NCBP1Q09161 790 aaKnown RBP23.06■■□□□ 1.28
ARHGEF1-218ENST00000599589 MTHFSDQ2M296 383 aaKnown RBP23.06■■□□□ 1.28
ARHGEF1-218ENST00000599589 SGSM2O43147 1006 aa23.05■■□□□ 1.28
ARHGEF1-218ENST00000599589 GJB2P29033 226 aa23.05■■□□□ 1.28
ARHGEF1-218ENST00000599589 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
ARHGEF1-218ENST00000599589 AOX1Q06278 1338 aa23.05■■□□□ 1.28
ARHGEF1-218ENST00000599589 NPHP4O75161 1426 aaPredicted RBP23.05■■□□□ 1.28
ARHGEF1-218ENST00000599589 CCDC83Q8IWF9 413 aa23.05■■□□□ 1.28
ARHGEF1-218ENST00000599589 ADGRL3Q9HAR2 1447 aa23.05■■□□□ 1.28
ARHGEF1-218ENST00000599589 USP54Q70EL1 1684 aa23.04■■□□□ 1.28
ARHGEF1-218ENST00000599589 RTF1Q92541 710 aaKnown RBP23.04■■□□□ 1.28
ARHGEF1-218ENST00000599589 LSG1Q9H089 658 aaKnown RBP23.04■■□□□ 1.28
ARHGEF1-218ENST00000599589 MTMR6Q9Y217 621 aa23.04■■□□□ 1.28
ARHGEF1-218ENST00000599589 KLHL34Q8N239 644 aa23.04■■□□□ 1.28
ARHGEF1-218ENST00000599589 FEZ1Q99689 392 aa23.04■■□□□ 1.28
ARHGEF1-218ENST00000599589 FOXO3O43524 673 aa23.03■■□□□ 1.28
ARHGEF1-218ENST00000599589 STK31Q9BXU1 1019 aa23.03■■□□□ 1.28
ARHGEF1-218ENST00000599589 C14orf37Q86TY3 774 aa23.03■■□□□ 1.28
ARHGEF1-218ENST00000599589 FAM200AQ8TCP9 573 aa23.03■■□□□ 1.28
ARHGEF1-218ENST00000599589 CHMP3Q9Y3E7 222 aa23.03■■□□□ 1.28
ARHGEF1-218ENST00000599589 CASTP20810 708 aaKnown RBP23.02■■□□□ 1.28
ARHGEF1-218ENST00000599589 FLIIQ13045 1269 aa23.02■■□□□ 1.28
ARHGEF1-218ENST00000599589 LUZP1Q86V48 1076 aa23.02■■□□□ 1.28
ARHGEF1-218ENST00000599589 C16orf45Q96MC5 204 aaPredicted RBP23.02■■□□□ 1.28
ARHGEF1-218ENST00000599589 LRMPQ12912 555 aa23.02■■□□□ 1.28
ARHGEF1-218ENST00000599589 CCDC186Q7Z3E2 898 aa23.02■■□□□ 1.28
ARHGEF1-218ENST00000599589 NECTIN2Q92692 538 aa23.02■■□□□ 1.28
ARHGEF1-218ENST00000599589 OGFRQ9NZT2 677 aa23.02■■□□□ 1.28
ARHGEF1-218ENST00000599589 VPS37CA5D8V6 355 aaPredicted RBP23.01■■□□□ 1.27
ARHGEF1-218ENST00000599589 CAMK4Q16566 473 aa23.01■■□□□ 1.27
ARHGEF1-218ENST00000599589 ESCO1Q5FWF5 840 aa23.01■■□□□ 1.27
ARHGEF1-218ENST00000599589 MARF1Q9Y4F3 1742 aaKnown RBP23.01■■□□□ 1.27
ARHGEF1-218ENST00000599589 SPG7Q9UQ90 795 aa23.01■■□□□ 1.27
ARHGEF1-218ENST00000599589 MRVI1Q9Y6F6 885 aa23.01■■□□□ 1.27
ARHGEF1-218ENST00000599589 PSME1Q06323 249 aa23■■□□□ 1.27
ARHGEF1-218ENST00000599589 PI4K2BQ8TCG2 481 aa23■■□□□ 1.27
ARHGEF1-218ENST00000599589 HYPKQ9NX55 129 aa23■■□□□ 1.27
ARHGEF1-218ENST00000599589 HTATSF1O43719 755 aaKnown RBP22.99■■□□□ 1.27
ARHGEF1-218ENST00000599589 CWC27Q6UX04 472 aaKnown RBP22.99■■□□□ 1.27
ARHGEF1-218ENST00000599589 ZNF771Q7L3S4 317 aaPredicted RBP22.99■■□□□ 1.27
ARHGEF1-218ENST00000599589 NRBP1Q9UHY1 535 aa22.99■■□□□ 1.27
ARHGEF1-218ENST00000599589 TYRO3Q06418 890 aa22.99■■□□□ 1.27
ARHGEF1-218ENST00000599589 MAP3K11Q16584 847 aa22.99■■□□□ 1.27
ARHGEF1-218ENST00000599589 DRC7Q8IY82 874 aa22.99■■□□□ 1.27
ARHGEF1-218ENST00000599589 CTNNA3Q9UI47 895 aa22.99■■□□□ 1.27
ARHGEF1-218ENST00000599589 SOS1Q07889 1333 aaPredicted RBP22.99■■□□□ 1.27
ARHGEF1-218ENST00000599589 SMTNL1A8MU46 457 aa22.98■■□□□ 1.27
ARHGEF1-218ENST00000599589 NAA30Q147X3 362 aaPredicted RBP22.98■■□□□ 1.27
ARHGEF1-218ENST00000599589 NUP62CLQ9H1M0 184 aa22.98■■□□□ 1.27
ARHGEF1-218ENST00000599589 TTC6Q86TZ1 520 aa22.97■■□□□ 1.27
ARHGEF1-218ENST00000599589 TNNT1P13805 278 aa22.97■■□□□ 1.27
ARHGEF1-218ENST00000599589 LIG1P18858 919 aa22.97■■□□□ 1.27
ARHGEF1-218ENST00000599589 SURF6O75683 361 aaKnown RBP22.96■■□□□ 1.27
ARHGEF1-218ENST00000599589 SYCP1Q15431 976 aa22.96■■□□□ 1.27
ARHGEF1-218ENST00000599589 CKAP2LQ8IYA6 745 aa22.96■■□□□ 1.27
ARHGEF1-218ENST00000599589 USP44Q9H0E7 712 aa22.96■■□□□ 1.27
ARHGEF1-218ENST00000599589 CNTROBQ8N137 903 aa22.96■■□□□ 1.27
ARHGEF1-218ENST00000599589 PDRG1Q9NUG6 133 aa22.96■■□□□ 1.27
ARHGEF1-218ENST00000599589 UBTFL1P0CB47 393 aaPredicted RBP22.95■■□□□ 1.27
ARHGEF1-218ENST00000599589 ST3GAL1Q11201 340 aa22.95■■□□□ 1.27
ARHGEF1-218ENST00000599589 ADCK5Q3MIX3 580 aa22.95■■□□□ 1.27
ARHGEF1-218ENST00000599589 SSH3Q8TE77 659 aa22.95■■□□□ 1.27
ARHGEF1-218ENST00000599589 JAKMIP1Q96N16 626 aaKnown RBP22.95■■□□□ 1.27
ARHGEF1-218ENST00000599589 CBX8Q9HC52 389 aa22.95■■□□□ 1.27
ARHGEF1-218ENST00000599589 ANO6Q4KMQ2 910 aa22.95■■□□□ 1.26
ARHGEF1-218ENST00000599589 LTV1Q96GA3 475 aaPredicted RBP22.95■■□□□ 1.26
ARHGEF1-218ENST00000599589 ZSCAN25Q6NSZ9 544 aa22.95■■□□□ 1.26
ARHGEF1-218ENST00000599589 RHPN1Q8TCX5 695 aa22.95■■□□□ 1.26
ARHGEF1-218ENST00000599589 IP6K1Q92551 441 aa22.95■■□□□ 1.26
ARHGEF1-218ENST00000599589 CCDC30Q5VVM6 783 aa22.94■■□□□ 1.26
ARHGEF1-218ENST00000599589 FAM173BQ6P4H8 233 aa22.94■■□□□ 1.26
ARHGEF1-218ENST00000599589 FERMT3Q86UX7 667 aa22.94■■□□□ 1.26
ARHGEF1-218ENST00000599589 KCNH5Q8NCM2 988 aa22.94■■□□□ 1.26
ARHGEF1-218ENST00000599589 TRIM5Q9C035 493 aa22.94■■□□□ 1.26
ARHGEF1-218ENST00000599589 GNAT3A8MTJ3 354 aa22.94■■□□□ 1.26
ARHGEF1-218ENST00000599589 NECAB1Q8N987 351 aa22.94■■□□□ 1.26
ARHGEF1-218ENST00000599589 DDX54Q8TDD1 881 aaKnown RBP22.94■■□□□ 1.26
ARHGEF1-218ENST00000599589 NWD1Q149M9 1564 aa22.94■■□□□ 1.26
ARHGEF1-218ENST00000599589 RAB11FIP3O75154 756 aa22.93■■□□□ 1.26
ARHGEF1-218ENST00000599589 KRT85P78386 507 aa22.93■■□□□ 1.26
ARHGEF1-218ENST00000599589 VPS53Q5VIR6 699 aa22.93■■□□□ 1.26
ARHGEF1-218ENST00000599589 PPP1R42Q7Z4L9 355 aa22.93■■□□□ 1.26
ARHGEF1-218ENST00000599589 BCL11BQ9C0K0 894 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms