RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 HINFPQ9BQA5 517 aa12.03□□□□□ -0.48
LINC00343-208ENST00000599264 DNMT3AQ9Y6K1 912 aaPredicted RBP12.03□□□□□ -0.48
LINC00343-208ENST00000599264 CRTC2Q53ET0 693 aaPredicted RBP12.02□□□□□ -0.49
LINC00343-208ENST00000599264 AVENQ9NQS1 362 aaPredicted RBP12.02□□□□□ -0.49
LINC00343-208ENST00000599264 MARK1Q9P0L2 795 aa12.02□□□□□ -0.49
LINC00343-208ENST00000599264 GGA1Q9UJY5 639 aa12.02□□□□□ -0.49
LINC00343-208ENST00000599264 PRR12Q9ULL5 1215 aa12.02□□□□□ -0.49
LINC00343-208ENST00000599264 HCN4Q9Y3Q4 1203 aa12.02□□□□□ -0.49
LINC00343-208ENST00000599264 ATAD2Q6PL18 1390 aa12.02□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L15C9J2P7 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L10C9JJH3 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L13C9JLJ4 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L12C9JPN9 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L11C9JVI0 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L21D6R901 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L18D6R9N7 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L22D6RA61 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L17D6RBQ6 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L19D6RCP7 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L20D6RJB6 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 CD33P20138 364 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 GSK3AP49840 483 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 USP17L24Q0WX57 530 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 DPYDQ12882 1025 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 ANKMY2Q8IV38 441 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 STAG2Q8N3U4 1231 aa12.01□□□□□ -0.49
LINC00343-208ENST00000599264 AMPD1P23109 780 aa12□□□□□ -0.49
LINC00343-208ENST00000599264 ADH6P28332 368 aa12□□□□□ -0.49
LINC00343-208ENST00000599264 SH3PXD2AQ5TCZ1 1133 aa12□□□□□ -0.49
LINC00343-208ENST00000599264 POTEAQ6S8J7 498 aa12□□□□□ -0.49
LINC00343-208ENST00000599264 SCG3Q8WXD2 468 aaKnown RBP12□□□□□ -0.49
LINC00343-208ENST00000599264 PHACTR1Q9C0D0 580 aa12□□□□□ -0.49
LINC00343-208ENST00000599264 HIF1AQ16665 826 aa11.99□□□□□ -0.49
LINC00343-208ENST00000599264 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
LINC00343-208ENST00000599264 RRAGCQ9HB90 399 aa11.99□□□□□ -0.49
LINC00343-208ENST00000599264 CNTNAP5Q8WYK1 1306 aa11.99□□□□□ -0.49
LINC00343-208ENST00000599264 EFSO43281 561 aa11.98□□□□□ -0.49
LINC00343-208ENST00000599264 NEURL1BA8MQ27 555 aa11.97□□□□□ -0.49
LINC00343-208ENST00000599264 SHISA8B8ZZ34 492 aa11.97□□□□□ -0.49
LINC00343-208ENST00000599264 C21orf2O43822 256 aa11.97□□□□□ -0.49
LINC00343-208ENST00000599264 C7orf43Q8WVR3 580 aa11.97□□□□□ -0.49
LINC00343-208ENST00000599264 C2orf49Q9BVC5 232 aaPredicted RBP11.97□□□□□ -0.49
LINC00343-208ENST00000599264 MKL2Q9ULH7 1088 aa11.97□□□□□ -0.49
LINC00343-208ENST00000599264 PIK3R2O00459 728 aa11.96□□□□□ -0.49
LINC00343-208ENST00000599264 RFX1P22670 979 aa11.96□□□□□ -0.49
LINC00343-208ENST00000599264 CFAP70Q5T0N1 1121 aa11.96□□□□□ -0.49
LINC00343-208ENST00000599264 C1orf229Q6ZS94 237 aaPredicted RBP11.96□□□□□ -0.49
LINC00343-208ENST00000599264 EPXP11678 715 aa11.95□□□□□ -0.5
LINC00343-208ENST00000599264 ZNF468Q5VIY5 522 aaPredicted RBP11.95□□□□□ -0.5
LINC00343-208ENST00000599264 ALDH16A1Q8IZ83 802 aa11.95□□□□□ -0.5
LINC00343-208ENST00000599264 KCTD17Q8N5Z5 321 aa11.95□□□□□ -0.5
LINC00343-208ENST00000599264 ZMYND15Q9H091 742 aa11.95□□□□□ -0.5
LINC00343-208ENST00000599264 IGFBP4P22692 258 aa11.94□□□□□ -0.5
LINC00343-208ENST00000599264 NEUROD1Q13562 356 aa11.94□□□□□ -0.5
LINC00343-208ENST00000599264 FAM200AQ8TCP9 573 aa11.94□□□□□ -0.5
LINC00343-208ENST00000599264 CEP63Q96MT8 703 aa11.94□□□□□ -0.5
LINC00343-208ENST00000599264 BTBD6Q96KE9 485 aa11.93□□□□□ -0.5
LINC00343-208ENST00000599264 SUSD3Q96L08 255 aa11.93□□□□□ -0.5
LINC00343-208ENST00000599264 STRN4Q9NRL3 753 aa11.93□□□□□ -0.5
LINC00343-208ENST00000599264 NGLY1Q96IV0 654 aa11.92□□□□□ -0.5
LINC00343-208ENST00000599264 HCN2Q9UL51 889 aa11.92□□□□□ -0.5
LINC00343-208ENST00000599264 PCBP4P57723 403 aaKnown RBP11.91□□□□□ -0.5
LINC00343-208ENST00000599264 HSH2DQ96JZ2 352 aa11.91□□□□□ -0.5
LINC00343-208ENST00000599264 BRD7Q9NPI1 651 aa11.91□□□□□ -0.5
LINC00343-208ENST00000599264 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.5
LINC00343-208ENST00000599264 VTI1AQ96AJ9 217 aa11.9□□□□□ -0.5
LINC00343-208ENST00000599264 ARXQ96QS3 562 aa11.9□□□□□ -0.5
LINC00343-208ENST00000599264 ALAS2P22557 587 aa11.89□□□□□ -0.51
LINC00343-208ENST00000599264 SFSWAPQ12872 951 aaKnown RBP11.89□□□□□ -0.51
LINC00343-208ENST00000599264 RTN1Q16799 776 aa11.89□□□□□ -0.51
LINC00343-208ENST00000599264 CDCA8Q53HL2 280 aa11.89□□□□□ -0.51
LINC00343-208ENST00000599264 KLF15Q9UIH9 416 aa11.89□□□□□ -0.51
LINC00343-208ENST00000599264 IGHA1P01876 353 aa11.88□□□□□ -0.51
LINC00343-208ENST00000599264 SYT9Q86SS6 491 aa11.88□□□□□ -0.51
LINC00343-208ENST00000599264 ALYREFQ86V81 257 aaKnown RBP11.88□□□□□ -0.51
LINC00343-208ENST00000599264 FCHSD1Q86WN1 690 aa11.88□□□□□ -0.51
LINC00343-208ENST00000599264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00343-208ENST00000599264 KCNH4Q9UQ05 1017 aa11.88□□□□□ -0.51
LINC00343-208ENST00000599264 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
LINC00343-208ENST00000599264 FOXO3O43524 673 aa11.87□□□□□ -0.51
LINC00343-208ENST00000599264 SIN3BO75182 1162 aa11.87□□□□□ -0.51
LINC00343-208ENST00000599264 LGR5O75473 907 aa11.87□□□□□ -0.51
LINC00343-208ENST00000599264 KCNQ4P56696 695 aa11.87□□□□□ -0.51
LINC00343-208ENST00000599264 TYRO3Q06418 890 aa11.87□□□□□ -0.51
LINC00343-208ENST00000599264 CHSY3Q70JA7 882 aa11.87□□□□□ -0.51
LINC00343-208ENST00000599264 ZNF280CQ8ND82 737 aa11.87□□□□□ -0.51
LINC00343-208ENST00000599264 NOVA2Q9UNW9 492 aaKnown RBP11.87□□□□□ -0.51
LINC00343-208ENST00000599264 SPEM2Q0P670 501 aa11.86□□□□□ -0.51
LINC00343-208ENST00000599264 BTLAQ7Z6A9 289 aa11.86□□□□□ -0.51
LINC00343-208ENST00000599264 DCAF5Q96JK2 942 aa11.86□□□□□ -0.51
LINC00343-208ENST00000599264 ELOA3CA0A087WX78 387 aaPredicted RBP11.85□□□□□ -0.51
LINC00343-208ENST00000599264 ELOA3DA6NLF2 546 aaPredicted RBP11.85□□□□□ -0.51
LINC00343-208ENST00000599264 GNB5O14775 395 aa11.85□□□□□ -0.51
LINC00343-208ENST00000599264 WEE1P30291 646 aa11.85□□□□□ -0.51
LINC00343-208ENST00000599264 ELOA3BQ3SY89 546 aa11.85□□□□□ -0.51
LINC00343-208ENST00000599264 IER5Q5VY09 327 aa11.85□□□□□ -0.51
LINC00343-208ENST00000599264 ELOA3Q8NG57 546 aa11.85□□□□□ -0.51
LINC00343-208ENST00000599264 GPAT2Q6NUI2 795 aa11.84□□□□□ -0.51
LINC00343-208ENST00000599264 CCDC97Q96F63 343 aaPredicted RBP11.84□□□□□ -0.51
LINC00343-208ENST00000599264 NOP53Q9NZM5 478 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms