RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 CNBD1Q8NA66 436 aa20.87■□□□□ 0.93
SMG9-208ENST00000598886 SETDB2Q96T68 719 aa20.87■□□□□ 0.93
SMG9-208ENST00000598886 SRGNP10124 158 aa20.86■□□□□ 0.93
SMG9-208ENST00000598886 DNAJC5GQ8N7S2 189 aa20.86■□□□□ 0.93
SMG9-208ENST00000598886 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
SMG9-208ENST00000598886 APLP1P51693 650 aa20.85■□□□□ 0.93
SMG9-208ENST00000598886 LTBP3Q9NS15 1303 aa20.84■□□□□ 0.93
SMG9-208ENST00000598886 KLRG2A4D1S0 409 aaPredicted RBP20.84■□□□□ 0.93
SMG9-208ENST00000598886 NFE2L2Q16236 605 aa20.84■□□□□ 0.93
SMG9-208ENST00000598886 STYK1Q6J9G0 422 aa20.84■□□□□ 0.93
SMG9-208ENST00000598886 RRAGCQ9HB90 399 aa20.84■□□□□ 0.93
SMG9-208ENST00000598886 GLTPD2A6NH11 291 aa20.83■□□□□ 0.93
SMG9-208ENST00000598886 C21orf2O43822 256 aa20.83■□□□□ 0.93
SMG9-208ENST00000598886 ZNF622Q969S3 477 aaKnown RBP eCLIP20.83■□□□□ 0.93
SMG9-208ENST00000598886 THUMPD2Q9BTF0 503 aaKnown RBP20.83■□□□□ 0.93
SMG9-208ENST00000598886 SNED1Q8TER0 1413 aa20.82■□□□□ 0.92
SMG9-208ENST00000598886 POTECB2RU33 542 aa20.82■□□□□ 0.92
SMG9-208ENST00000598886 FSTL1Q12841 308 aa20.82■□□□□ 0.92
SMG9-208ENST00000598886 C7orf43Q8WVR3 580 aa20.82■□□□□ 0.92
SMG9-208ENST00000598886 EIF4A1P60842 406 aaKnown RBP20.81■□□□□ 0.92
SMG9-208ENST00000598886 ST5P78524 1137 aa20.81■□□□□ 0.92
SMG9-208ENST00000598886 HLFQ16534 295 aa20.81■□□□□ 0.92
SMG9-208ENST00000598886 PRPF40BQ6NWY9 871 aaKnown RBP20.81■□□□□ 0.92
SMG9-208ENST00000598886 ANKRD36CQ5JPF3 1778 aa20.8■□□□□ 0.92
SMG9-208ENST00000598886 ZNF652Q9Y2D9 606 aa20.8■□□□□ 0.92
SMG9-208ENST00000598886 NPM2Q86SE8 214 aaKnown RBP20.79■□□□□ 0.92
SMG9-208ENST00000598886 NBPF5PQ86XG9 351 aaPredicted RBP20.79■□□□□ 0.92
SMG9-208ENST00000598886 PNISRQ8TF01 805 aaKnown RBP20.79■□□□□ 0.92
SMG9-208ENST00000598886 CNKSR1Q969H4 720 aa20.79■□□□□ 0.92
SMG9-208ENST00000598886 MASTLQ96GX5 879 aa20.79■□□□□ 0.92
SMG9-208ENST00000598886 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
SMG9-208ENST00000598886 ABCC12Q96J65 1359 aa20.78■□□□□ 0.92
SMG9-208ENST00000598886 ZNF219Q9P2Y4 722 aaPredicted RBP20.78■□□□□ 0.92
SMG9-208ENST00000598886 NIP7Q9Y221 180 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMG9-208ENST00000598886 C16orf71Q8IYS4 520 aaPredicted RBP20.77■□□□□ 0.92
SMG9-208ENST00000598886 HTRA3P83110 453 aa20.76■□□□□ 0.91
SMG9-208ENST00000598886 LRP10Q7Z4F1 713 aa20.76■□□□□ 0.91
SMG9-208ENST00000598886 TAOK3Q9H2K8 898 aa20.76■□□□□ 0.91
SMG9-208ENST00000598886 LAMB2P55268 1798 aa20.76■□□□□ 0.91
SMG9-208ENST00000598886 SCN4AP35499 1836 aa20.76■□□□□ 0.91
SMG9-208ENST00000598886 IBTKQ9P2D0 1353 aaPredicted RBP20.75■□□□□ 0.91
SMG9-208ENST00000598886 ADAMTSL1Q8N6G6 1762 aa20.75■□□□□ 0.91
SMG9-208ENST00000598886 VEGFAP15692 232 aaPredicted RBP20.75■□□□□ 0.91
SMG9-208ENST00000598886 NPR1P16066 1061 aa20.75■□□□□ 0.91
SMG9-208ENST00000598886 TTLL7Q6ZT98 887 aa20.75■□□□□ 0.91
SMG9-208ENST00000598886 MAP3K15Q6ZN16 1313 aa20.75■□□□□ 0.91
SMG9-208ENST00000598886 ERVV-1B6SEH8 477 aa20.74■□□□□ 0.91
SMG9-208ENST00000598886 RALBP1Q15311 655 aa20.74■□□□□ 0.91
SMG9-208ENST00000598886 CRY2Q49AN0 593 aa20.74■□□□□ 0.91
SMG9-208ENST00000598886 TPTE2Q6XPS3 522 aa20.74■□□□□ 0.91
SMG9-208ENST00000598886 SMC1BQ8NDV3 1235 aa20.74■□□□□ 0.91
SMG9-208ENST00000598886 UBN2Q6ZU65 1347 aa20.74■□□□□ 0.91
SMG9-208ENST00000598886 MAPK8IP3Q9UPT6 1336 aa20.74■□□□□ 0.91
SMG9-208ENST00000598886 PCNTO95613 3336 aa20.73■□□□□ 0.91
SMG9-208ENST00000598886 NEFMP07197 916 aa20.73■□□□□ 0.91
SMG9-208ENST00000598886 ERFEQ4G0M1 354 aa20.73■□□□□ 0.91
SMG9-208ENST00000598886 COL4A5P29400 1685 aa20.73■□□□□ 0.91
SMG9-208ENST00000598886 ERBB4Q15303 1308 aa20.73■□□□□ 0.91
SMG9-208ENST00000598886 SOGA3Q5TF21 947 aa20.72■□□□□ 0.91
SMG9-208ENST00000598886 OLFM4Q6UX06 510 aa20.72■□□□□ 0.91
SMG9-208ENST00000598886 NPHP1O15259 732 aa20.71■□□□□ 0.91
SMG9-208ENST00000598886 PDIA6Q15084 440 aa20.71■□□□□ 0.91
SMG9-208ENST00000598886 JMYQ8N9B5 988 aa20.71■□□□□ 0.91
SMG9-208ENST00000598886 PNNQ9H307 717 aaKnown RBP20.71■□□□□ 0.91
SMG9-208ENST00000598886 CCDC93Q567U6 631 aa20.7■□□□□ 0.9
SMG9-208ENST00000598886 IFFO2Q5TF58 517 aa20.7■□□□□ 0.9
SMG9-208ENST00000598886 KLRG1Q96E93 195 aa20.7■□□□□ 0.9
SMG9-208ENST00000598886 FAM177BA6PVY3 158 aa20.69■□□□□ 0.9
SMG9-208ENST00000598886 TMPOP42166 694 aaKnown RBP20.69■□□□□ 0.9
SMG9-208ENST00000598886 ZNF34Q8IZ26 560 aa20.69■□□□□ 0.9
SMG9-208ENST00000598886 RRP7AQ9Y3A4 280 aaKnown RBP20.69■□□□□ 0.9
SMG9-208ENST00000598886 MYBBP1AQ9BQG0 1328 aaKnown RBP20.69■□□□□ 0.9
SMG9-208ENST00000598886 MYL6BP14649 208 aa20.68■□□□□ 0.9
SMG9-208ENST00000598886 RIPK4P57078 832 aa20.68■□□□□ 0.9
SMG9-208ENST00000598886 FKBP4Q02790 459 aaKnown RBP eCLIP20.68■□□□□ 0.9
SMG9-208ENST00000598886 NUTM1Q86Y26 1132 aa20.68■□□□□ 0.9
SMG9-208ENST00000598886 NGEFQ8N5V2 710 aa20.68■□□□□ 0.9
SMG9-208ENST00000598886 ZBTB3Q9H5J0 574 aa20.68■□□□□ 0.9
SMG9-208ENST00000598886 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
SMG9-208ENST00000598886 DDNO94850 711 aaPredicted RBP20.67■□□□□ 0.9
SMG9-208ENST00000598886 NTSR2O95665 410 aa20.67■□□□□ 0.9
SMG9-208ENST00000598886 PROSER3Q2NL68 480 aa20.67■□□□□ 0.9
SMG9-208ENST00000598886 DPY19L2Q6NUT2 758 aa20.67■□□□□ 0.9
SMG9-208ENST00000598886 TSPYL4Q9UJ04 414 aa20.67■□□□□ 0.9
SMG9-208ENST00000598886 LTBP1Q14766 1721 aa20.67■□□□□ 0.9
SMG9-208ENST00000598886 HOXA10P31260 410 aaPredicted RBP20.66■□□□□ 0.9
SMG9-208ENST00000598886 SUSD4Q5VX71 490 aa20.66■□□□□ 0.9
SMG9-208ENST00000598886 GIGYF2Q6Y7W6 1299 aaKnown RBP20.66■□□□□ 0.9
SMG9-208ENST00000598886 KIF6Q6ZMV9 814 aa20.66■□□□□ 0.9
SMG9-208ENST00000598886 SLC51AQ86UW1 340 aa20.66■□□□□ 0.9
SMG9-208ENST00000598886 L3MBTL3Q96JM7 780 aaPredicted RBP20.66■□□□□ 0.9
SMG9-208ENST00000598886 NYXQ9GZU5 481 aa20.66■□□□□ 0.9
SMG9-208ENST00000598886 DDX60Q8IY21 1712 aaKnown RBP20.66■□□□□ 0.9
SMG9-208ENST00000598886 ZNF541Q9H0D2 1346 aa20.65■□□□□ 0.9
SMG9-208ENST00000598886 POTEIP0CG38 1075 aa20.65■□□□□ 0.9
SMG9-208ENST00000598886 POTEJP0CG39 1038 aa20.65■□□□□ 0.9
SMG9-208ENST00000598886 GPTP24298 496 aa20.65■□□□□ 0.9
SMG9-208ENST00000598886 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
SMG9-208ENST00000598886 C3orf67Q6ZVT6 689 aa20.65■□□□□ 0.9
SMG9-208ENST00000598886 ZNF277Q9NRM2 450 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms