RNA–Protein interactions for RNA: ENST00000597646.5

COPE-207, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 868 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-207ENST00000597646 LMOD3Q0VAK6 560 aa26.21■■□□□ 1.79
COPE-207ENST00000597646 PDZRN3Q9UPQ7 1066 aa26.21■■□□□ 1.79
COPE-207ENST00000597646 NIP7Q9Y221 180 aaKnown RBP eCLIP26.21■■□□□ 1.79
COPE-207ENST00000597646 DLEC1Q9Y238 1755 aa26.2■■□□□ 1.79
COPE-207ENST00000597646 MYL6BP14649 208 aa26.2■■□□□ 1.78
COPE-207ENST00000597646 RASSF7Q02833 373 aa26.2■■□□□ 1.78
COPE-207ENST00000597646 LAMB4A4D0S4 1761 aa26.2■■□□□ 1.78
COPE-207ENST00000597646 ANKRD31Q8N7Z5 1873 aa26.19■■□□□ 1.78
COPE-207ENST00000597646 HLFQ16534 295 aa26.17■■□□□ 1.78
COPE-207ENST00000597646 KIF3CO14782 793 aa26.16■■□□□ 1.78
COPE-207ENST00000597646 GTF2E1P29083 439 aaPredicted RBP26.16■■□□□ 1.78
COPE-207ENST00000597646 TPTE2Q6XPS3 522 aa26.16■■□□□ 1.78
COPE-207ENST00000597646 KIF6Q6ZMV9 814 aa26.16■■□□□ 1.78
COPE-207ENST00000597646 RUNDC1Q96C34 613 aa26.16■■□□□ 1.78
COPE-207ENST00000597646 PRKRIP1Q9H875 184 aaPredicted RBP26.16■■□□□ 1.78
COPE-207ENST00000597646 LAS1LQ9Y4W2 734 aaKnown RBP26.16■■□□□ 1.78
COPE-207ENST00000597646 SBF1O95248 1867 aa26.15■■□□□ 1.78
COPE-207ENST00000597646 C21orf2O43822 256 aa26.15■■□□□ 1.78
COPE-207ENST00000597646 EIF2S2P20042 333 aaKnown RBP26.15■■□□□ 1.78
COPE-207ENST00000597646 NMRK2Q9NPI5 230 aa26.15■■□□□ 1.78
COPE-207ENST00000597646 ADAMTS8Q9UP79 889 aa26.15■■□□□ 1.78
COPE-207ENST00000597646 LMNB1P20700 586 aa26.13■■□□□ 1.77
COPE-207ENST00000597646 CNKSR1Q969H4 720 aa26.13■■□□□ 1.77
COPE-207ENST00000597646 MASTLQ96GX5 879 aa26.13■■□□□ 1.77
COPE-207ENST00000597646 KDM2BQ8NHM5 1336 aa26.13■■□□□ 1.77
COPE-207ENST00000597646 COL11A2P13942 1736 aaPredicted RBP26.12■■□□□ 1.77
COPE-207ENST00000597646 SRGNP10124 158 aa26.12■■□□□ 1.77
COPE-207ENST00000597646 STYK1Q6J9G0 422 aa26.12■■□□□ 1.77
COPE-207ENST00000597646 TTLL7Q6ZT98 887 aa26.12■■□□□ 1.77
COPE-207ENST00000597646 C16orf71Q8IYS4 520 aaPredicted RBP26.12■■□□□ 1.77
COPE-207ENST00000597646 ZBTB3Q9H5J0 574 aa26.12■■□□□ 1.77
COPE-207ENST00000597646 RGL2O15211 777 aa26.11■■□□□ 1.77
COPE-207ENST00000597646 MAP3K15Q6ZN16 1313 aa26.11■■□□□ 1.77
COPE-207ENST00000597646 CACNA1SQ13698 1873 aa26.11■■□□□ 1.77
COPE-207ENST00000597646 ERVV-1B6SEH8 477 aa26.1■■□□□ 1.77
COPE-207ENST00000597646 NECTIN2Q92692 538 aa26.1■■□□□ 1.77
COPE-207ENST00000597646 BABAM1Q9NWV8 329 aa26.1■■□□□ 1.77
COPE-207ENST00000597646 CCDC88AQ3V6T2 1871 aa26.09■■□□□ 1.77
COPE-207ENST00000597646 ZEB1P37275 1124 aaPredicted RBP26.09■■□□□ 1.77
COPE-207ENST00000597646 PRPF40BQ6NWY9 871 aaKnown RBP26.09■■□□□ 1.77
COPE-207ENST00000597646 NFKBIEO00221 500 aa26.08■■□□□ 1.77
COPE-207ENST00000597646 GPTP24298 496 aa26.08■■□□□ 1.77
COPE-207ENST00000597646 RRAGCQ9HB90 399 aa26.08■■□□□ 1.77
COPE-207ENST00000597646 NUP98P52948 1817 aa26.07■■□□□ 1.76
COPE-207ENST00000597646 TOMM70O94826 608 aa26.07■■□□□ 1.76
COPE-207ENST00000597646 NPR1P16066 1061 aa26.07■■□□□ 1.76
COPE-207ENST00000597646 NYXQ9GZU5 481 aa26.07■■□□□ 1.76
COPE-207ENST00000597646 ERBB4Q15303 1308 aa26.07■■□□□ 1.76
COPE-207ENST00000597646 HSPA6P17066 643 aa26.06■■□□□ 1.76
COPE-207ENST00000597646 PRELPP51888 382 aa26.06■■□□□ 1.76
COPE-207ENST00000597646 TRIM35Q9UPQ4 493 aa26.06■■□□□ 1.76
COPE-207ENST00000597646 SLX4Q8IY92 1834 aa26.06■■□□□ 1.76
COPE-207ENST00000597646 ANXA1P04083 346 aa26.05■■□□□ 1.76
COPE-207ENST00000597646 NUTM1Q86Y26 1132 aa26.05■■□□□ 1.76
COPE-207ENST00000597646 SOGA3Q5TF21 947 aa26.04■■□□□ 1.76
COPE-207ENST00000597646 CHL1O00533 1208 aa26.03■■□□□ 1.76
COPE-207ENST00000597646 AIMP1Q12904 312 aaKnown RBP26.03■■□□□ 1.76
COPE-207ENST00000597646 TAOK3Q9H2K8 898 aa26.03■■□□□ 1.76
COPE-207ENST00000597646 ZC3H4Q9UPT8 1303 aaKnown RBP26.03■■□□□ 1.76
COPE-207ENST00000597646 KRT24Q2M2I5 525 aa26.02■■□□□ 1.76
COPE-207ENST00000597646 ERFEQ4G0M1 354 aa26.02■■□□□ 1.76
COPE-207ENST00000597646 GIGYF2Q6Y7W6 1299 aaKnown RBP26.02■■□□□ 1.76
COPE-207ENST00000597646 PDIA6Q15084 440 aa26.01■■□□□ 1.75
COPE-207ENST00000597646 PROSER3Q2NL68 480 aa26.01■■□□□ 1.75
COPE-207ENST00000597646 FER1L6Q2WGJ9 1857 aa26■■□□□ 1.75
COPE-207ENST00000597646 KLRG2A4D1S0 409 aaPredicted RBP26■■□□□ 1.75
COPE-207ENST00000597646 GLTPD2A6NH11 291 aa26■■□□□ 1.75
COPE-207ENST00000597646 ALDH1B1P30837 517 aa26■■□□□ 1.75
COPE-207ENST00000597646 SUSD4Q5VX71 490 aa26■■□□□ 1.75
COPE-207ENST00000597646 DPY19L2Q6NUT2 758 aa26■■□□□ 1.75
COPE-207ENST00000597646 TIAM2Q8IVF5 1701 aa26■■□□□ 1.75
COPE-207ENST00000597646 UBN2Q6ZU65 1347 aa25.99■■□□□ 1.75
COPE-207ENST00000597646 APAF1O14727 1248 aa25.99■■□□□ 1.75
COPE-207ENST00000597646 CCDC93Q567U6 631 aa25.99■■□□□ 1.75
COPE-207ENST00000597646 PPP1R42Q7Z4L9 355 aa25.99■■□□□ 1.75
COPE-207ENST00000597646 ZNF34Q8IZ26 560 aa25.99■■□□□ 1.75
COPE-207ENST00000597646 ARFGEF2Q9Y6D5 1785 aa25.98■■□□□ 1.75
COPE-207ENST00000597646 COPS6Q7L5N1 327 aa25.98■■□□□ 1.75
COPE-207ENST00000597646 RBM46Q8TBY0 533 aaKnown RBP25.98■■□□□ 1.75
COPE-207ENST00000597646 RPGRQ92834 1020 aaKnown RBP25.98■■□□□ 1.75
COPE-207ENST00000597646 TNRC6CQ9HCJ0 1690 aaKnown RBP25.98■■□□□ 1.75
COPE-207ENST00000597646 ABCC12Q96J65 1359 aa25.97■■□□□ 1.75
COPE-207ENST00000597646 XAGE3Q8WTP9 111 aa25.97■■□□□ 1.75
COPE-207ENST00000597646 LTBP3Q9NS15 1303 aa25.96■■□□□ 1.75
COPE-207ENST00000597646 PARP10Q53GL7 1025 aa25.96■■□□□ 1.75
COPE-207ENST00000597646 LRP10Q7Z4F1 713 aa25.96■■□□□ 1.75
COPE-207ENST00000597646 CFAP44Q96MT7 982 aa25.96■■□□□ 1.75
COPE-207ENST00000597646 VEGFAP15692 232 aaPredicted RBP25.95■■□□□ 1.74
COPE-207ENST00000597646 HDGFL1Q5TGJ6 251 aa25.95■■□□□ 1.74
COPE-207ENST00000597646 OLFM4Q6UX06 510 aa25.95■■□□□ 1.74
COPE-207ENST00000597646 C7orf43Q8WVR3 580 aa25.95■■□□□ 1.74
COPE-207ENST00000597646 DDX21Q9NR30 783 aaKnown RBP eCLIP25.95■■□□□ 1.74
COPE-207ENST00000597646 UTP14AQ9BVJ6 771 aaKnown RBP25.94■■□□□ 1.74
COPE-207ENST00000597646 CHPF2Q9P2E5 772 aa25.94■■□□□ 1.74
COPE-207ENST00000597646 DICER1Q9UPY3 1922 aaKnown RBP25.94■■□□□ 1.74
COPE-207ENST00000597646 NTSR2O95665 410 aa25.93■■□□□ 1.74
COPE-207ENST00000597646 APLP1P51693 650 aa25.93■■□□□ 1.74
COPE-207ENST00000597646 RTKN2Q8IZC4 609 aa25.93■■□□□ 1.74
COPE-207ENST00000597646 MBIPQ9NS73 344 aa25.93■■□□□ 1.74
COPE-207ENST00000597646 FKBP4Q02790 459 aaKnown RBP eCLIP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms