RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 ZC3H4Q9UPT8 1303 aaKnown RBP21.41■■□□□ 1.02
LIM2-202ENST00000596399 SLX4Q8IY92 1834 aa21.41■■□□□ 1.02
LIM2-202ENST00000596399 SRGNP10124 158 aa21.4■■□□□ 1.02
LIM2-202ENST00000596399 ST5P78524 1137 aa21.4■■□□□ 1.02
LIM2-202ENST00000596399 TAF7Q15545 349 aaPredicted RBP21.4■■□□□ 1.02
LIM2-202ENST00000596399 CACNA1SQ13698 1873 aa21.39■■□□□ 1.02
LIM2-202ENST00000596399 FAM177BA6PVY3 158 aa21.39■■□□□ 1.01
LIM2-202ENST00000596399 POTECB2RU33 542 aa21.39■■□□□ 1.01
LIM2-202ENST00000596399 HTATSF1O43719 755 aaKnown RBP21.39■■□□□ 1.01
LIM2-202ENST00000596399 PRPF40BQ6NWY9 871 aaKnown RBP21.39■■□□□ 1.01
LIM2-202ENST00000596399 NBPF5PQ86XG9 351 aaPredicted RBP21.39■■□□□ 1.01
LIM2-202ENST00000596399 THUMPD2Q9BTF0 503 aaKnown RBP21.39■■□□□ 1.01
LIM2-202ENST00000596399 FER1L6Q2WGJ9 1857 aa21.39■■□□□ 1.01
LIM2-202ENST00000596399 VEGFAP15692 232 aaPredicted RBP21.38■■□□□ 1.01
LIM2-202ENST00000596399 HLFQ16534 295 aa21.38■■□□□ 1.01
LIM2-202ENST00000596399 PDZRN3Q9UPQ7 1066 aa21.38■■□□□ 1.01
LIM2-202ENST00000596399 ERFEQ4G0M1 354 aa21.37■■□□□ 1.01
LIM2-202ENST00000596399 STYK1Q6J9G0 422 aa21.37■■□□□ 1.01
LIM2-202ENST00000596399 CLEC4GQ6UXB4 293 aa21.37■■□□□ 1.01
LIM2-202ENST00000596399 NGEFQ8N5V2 710 aa21.37■■□□□ 1.01
LIM2-202ENST00000596399 SMC1BQ8NDV3 1235 aa21.37■■□□□ 1.01
LIM2-202ENST00000596399 CNKSR1Q969H4 720 aa21.37■■□□□ 1.01
LIM2-202ENST00000596399 MASTLQ96GX5 879 aa21.37■■□□□ 1.01
LIM2-202ENST00000596399 PLEKHF1Q96S99 279 aa21.37■■□□□ 1.01
LIM2-202ENST00000596399 DLG5Q8TDM6 1919 aa21.36■■□□□ 1.01
LIM2-202ENST00000596399 NIP7Q9Y221 180 aaKnown RBP eCLIP21.36■■□□□ 1.01
LIM2-202ENST00000596399 OLFM4Q6UX06 510 aa21.35■■□□□ 1.01
LIM2-202ENST00000596399 KLRG1Q96E93 195 aa21.35■■□□□ 1.01
LIM2-202ENST00000596399 TAOK3Q9H2K8 898 aa21.35■■□□□ 1.01
LIM2-202ENST00000596399 ZNF652Q9Y2D9 606 aa21.35■■□□□ 1.01
LIM2-202ENST00000596399 PCNTO95613 3336 aa21.34■■□□□ 1.01
LIM2-202ENST00000596399 C7orf43Q8WVR3 580 aa21.33■■□□□ 1.01
LIM2-202ENST00000596399 DICER1Q9UPY3 1922 aaKnown RBP21.32■■□□□ 1
LIM2-202ENST00000596399 NFE2L2Q16236 605 aa21.32■■□□□ 1
LIM2-202ENST00000596399 DPY19L2Q6NUT2 758 aa21.32■■□□□ 1
LIM2-202ENST00000596399 KDM3BQ7LBC6 1761 aa21.32■■□□□ 1
LIM2-202ENST00000596399 LTBP3Q9NS15 1303 aa21.31■■□□□ 1
LIM2-202ENST00000596399 LAMB4A4D0S4 1761 aa21.31■■□□□ 1
LIM2-202ENST00000596399 ARFGEF2Q9Y6D5 1785 aa21.31■■□□□ 1
LIM2-202ENST00000596399 KLRG2A4D1S0 409 aaPredicted RBP21.31■■□□□ 1
LIM2-202ENST00000596399 DDNO94850 711 aaPredicted RBP21.31■■□□□ 1
LIM2-202ENST00000596399 EIF4A1P60842 406 aaKnown RBP21.31■■□□□ 1
LIM2-202ENST00000596399 TPTE2Q6XPS3 522 aa21.31■■□□□ 1
LIM2-202ENST00000596399 RRP7AQ9Y3A4 280 aaKnown RBP21.31■■□□□ 1
LIM2-202ENST00000596399 NEFMP07197 916 aa21.3■■□□□ 1
LIM2-202ENST00000596399 POTEIP0CG38 1075 aa21.3■■□□□ 1
LIM2-202ENST00000596399 POTEJP0CG39 1038 aa21.3■■□□□ 1
LIM2-202ENST00000596399 NPR1P16066 1061 aa21.3■■□□□ 1
LIM2-202ENST00000596399 TTLL7Q6ZT98 887 aa21.3■■□□□ 1
LIM2-202ENST00000596399 MYL6BP14649 208 aa21.29■■□□□ 1
LIM2-202ENST00000596399 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
LIM2-202ENST00000596399 JMYQ8N9B5 988 aa21.29■■□□□ 1
LIM2-202ENST00000596399 ZNF277Q9NRM2 450 aaPredicted RBP21.28■■□□□ 1
LIM2-202ENST00000596399 ABCC12Q96J65 1359 aa21.27■■□□□ 1
LIM2-202ENST00000596399 CCDC93Q567U6 631 aa21.27■■□□□ 1
LIM2-202ENST00000596399 SOGA3Q5TF21 947 aa21.27■■□□□ 1
LIM2-202ENST00000596399 PNISRQ8TF01 805 aaKnown RBP21.27■■□□□ 1
LIM2-202ENST00000596399 GPTP24298 496 aa21.26■□□□□ 0.99
LIM2-202ENST00000596399 GTF2E1P29083 439 aaPredicted RBP21.26■□□□□ 0.99
LIM2-202ENST00000596399 SLC51AQ86UW1 340 aa21.26■□□□□ 0.99
LIM2-202ENST00000596399 ZBTB3Q9H5J0 574 aa21.26■□□□□ 0.99
LIM2-202ENST00000596399 MAPK8IP3Q9UPT6 1336 aa21.26■□□□□ 0.99
LIM2-202ENST00000596399 RGL2O15211 777 aa21.25■□□□□ 0.99
LIM2-202ENST00000596399 MAP3K15Q6ZN16 1313 aa21.25■□□□□ 0.99
LIM2-202ENST00000596399 NUP98P52948 1817 aa21.25■□□□□ 0.99
LIM2-202ENST00000596399 ERVV-1B6SEH8 477 aa21.24■□□□□ 0.99
LIM2-202ENST00000596399 FKBP4Q02790 459 aaKnown RBP eCLIP21.24■□□□□ 0.99
LIM2-202ENST00000596399 UBN2Q6ZU65 1347 aa21.24■□□□□ 0.99
LIM2-202ENST00000596399 ZNF541Q9H0D2 1346 aa21.24■□□□□ 0.99
LIM2-202ENST00000596399 COL13A1Q5TAT6 717 aaPredicted RBP21.22■□□□□ 0.99
LIM2-202ENST00000596399 SUSD4Q5VX71 490 aa21.22■□□□□ 0.99
LIM2-202ENST00000596399 CHADLQ6NUI6 762 aa21.22■□□□□ 0.99
LIM2-202ENST00000596399 KIF6Q6ZMV9 814 aa21.22■□□□□ 0.99
LIM2-202ENST00000596399 ANXA1P04083 346 aa21.21■□□□□ 0.99
LIM2-202ENST00000596399 ALDH1B1P30837 517 aa21.21■□□□□ 0.99
LIM2-202ENST00000596399 RIPK4P57078 832 aa21.21■□□□□ 0.99
LIM2-202ENST00000596399 SYNE4Q8N205 404 aa21.21■□□□□ 0.99
LIM2-202ENST00000596399 TSPYL4Q9UJ04 414 aa21.21■□□□□ 0.99
LIM2-202ENST00000596399 EIF2S2P20042 333 aaKnown RBP21.2■□□□□ 0.98
LIM2-202ENST00000596399 PROSER3Q2NL68 480 aa21.2■□□□□ 0.98
LIM2-202ENST00000596399 CRY2Q49AN0 593 aa21.2■□□□□ 0.98
LIM2-202ENST00000596399 C3orf67Q6ZVT6 689 aa21.2■□□□□ 0.98
LIM2-202ENST00000596399 NYXQ9GZU5 481 aa21.2■□□□□ 0.98
LIM2-202ENST00000596399 PNNQ9H307 717 aaKnown RBP21.2■□□□□ 0.98
LIM2-202ENST00000596399 TCERG1O14776 1098 aaKnown RBP21.19■□□□□ 0.98
LIM2-202ENST00000596399 PDIA6Q15084 440 aa21.19■□□□□ 0.98
LIM2-202ENST00000596399 LRP10Q7Z4F1 713 aa21.19■□□□□ 0.98
LIM2-202ENST00000596399 ZNF34Q8IZ26 560 aa21.19■□□□□ 0.98
LIM2-202ENST00000596399 RTKN2Q8IZC4 609 aa21.19■□□□□ 0.98
LIM2-202ENST00000596399 CCDC146Q8IYE0 955 aa21.18■□□□□ 0.98
LIM2-202ENST00000596399 NECTIN2Q92692 538 aa21.18■□□□□ 0.98
LIM2-202ENST00000596399 L3MBTL3Q96JM7 780 aaPredicted RBP21.18■□□□□ 0.98
LIM2-202ENST00000596399 TAF1DQ9H5J8 278 aaPredicted RBP21.18■□□□□ 0.98
LIM2-202ENST00000596399 SNED1Q8TER0 1413 aa21.18■□□□□ 0.98
LIM2-202ENST00000596399 NTSR2O95665 410 aa21.17■□□□□ 0.98
LIM2-202ENST00000596399 IARSP41252 1262 aaKnown RBP21.17■□□□□ 0.98
LIM2-202ENST00000596399 DDX10Q13206 875 aaKnown RBP21.17■□□□□ 0.98
LIM2-202ENST00000596399 GIGYF2Q6Y7W6 1299 aaKnown RBP21.17■□□□□ 0.98
LIM2-202ENST00000596399 COL4A5P29400 1685 aa21.16■□□□□ 0.98
LIM2-202ENST00000596399 TMPOP42166 694 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms