RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 DDB1Q16531 1140 aa11.15□□□□□ -0.62
LINC00347-204ENST00000596240 ZFRQ96KR1 1074 aaKnown RBP11.15□□□□□ -0.62
LINC00347-204ENST00000596240 LY75O60449 1722 aa11.15□□□□□ -0.63
LINC00347-204ENST00000596240 PKD1L3Q7Z443 1732 aa11.15□□□□□ -0.63
LINC00347-204ENST00000596240 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.63
LINC00347-204ENST00000596240 MEGF6O75095 1541 aa11.14□□□□□ -0.63
LINC00347-204ENST00000596240 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
LINC00347-204ENST00000596240 APBA3O96018 575 aa11.14□□□□□ -0.63
LINC00347-204ENST00000596240 R3HDM1Q15032 1099 aaKnown RBP11.14□□□□□ -0.63
LINC00347-204ENST00000596240 WNT2BQ93097 391 aa11.14□□□□□ -0.63
LINC00347-204ENST00000596240 CFAP53Q96M91 514 aa11.14□□□□□ -0.63
LINC00347-204ENST00000596240 ADGRG1Q9Y653 693 aa11.14□□□□□ -0.63
LINC00347-204ENST00000596240 QSER1Q2KHR3 1735 aa11.14□□□□□ -0.63
LINC00347-204ENST00000596240 RTL1A6NKG5 1358 aa11.14□□□□□ -0.63
LINC00347-204ENST00000596240 GOLGA8CPA6NN73 597 aa11.13□□□□□ -0.63
LINC00347-204ENST00000596240 GNPATO15228 680 aa11.13□□□□□ -0.63
LINC00347-204ENST00000596240 BCAMP50895 628 aa11.13□□□□□ -0.63
LINC00347-204ENST00000596240 LAPTM4BQ86VI4 370 aa11.13□□□□□ -0.63
LINC00347-204ENST00000596240 MAP2P11137 1827 aaKnown RBP11.13□□□□□ -0.63
LINC00347-204ENST00000596240 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
LINC00347-204ENST00000596240 CSB-PGBD3P0DP91 1061 aa11.12□□□□□ -0.63
LINC00347-204ENST00000596240 THSD4Q6ZMP0 1018 aa11.12□□□□□ -0.63
LINC00347-204ENST00000596240 ANKRD24Q8TF21 1146 aa11.12□□□□□ -0.63
LINC00347-204ENST00000596240 EYA1Q99502 592 aa11.12□□□□□ -0.63
LINC00347-204ENST00000596240 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
LINC00347-204ENST00000596240 FBLN1P23142 703 aa11.11□□□□□ -0.63
LINC00347-204ENST00000596240 COL24A1Q17RW2 1714 aa11.1□□□□□ -0.63
LINC00347-204ENST00000596240 FYB1O15117 783 aa11.1□□□□□ -0.63
LINC00347-204ENST00000596240 GGNBP2Q9H3C7 697 aa11.1□□□□□ -0.63
LINC00347-204ENST00000596240 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
LINC00347-204ENST00000596240 ITGB4P16144 1822 aa11.09□□□□□ -0.63
LINC00347-204ENST00000596240 HOXC9P31274 260 aa11.09□□□□□ -0.63
LINC00347-204ENST00000596240 TNNT2P45379 298 aaPredicted RBP11.09□□□□□ -0.63
LINC00347-204ENST00000596240 IP6K1Q92551 441 aa11.09□□□□□ -0.63
LINC00347-204ENST00000596240 TAF1LQ8IZX4 1826 aa11.08□□□□□ -0.64
LINC00347-204ENST00000596240 PLSCR1O15162 318 aa11.08□□□□□ -0.64
LINC00347-204ENST00000596240 PTPN5P54829 565 aa11.08□□□□□ -0.64
LINC00347-204ENST00000596240 SAMD7Q7Z3H4 446 aa11.08□□□□□ -0.64
LINC00347-204ENST00000596240 ANKK1Q8NFD2 765 aa11.08□□□□□ -0.64
LINC00347-204ENST00000596240 COG3Q96JB2 828 aa11.08□□□□□ -0.64
LINC00347-204ENST00000596240 NLRP2Q9NX02 1062 aa11.08□□□□□ -0.64
LINC00347-204ENST00000596240 GTF3C3Q9Y5Q9 886 aa11.08□□□□□ -0.64
LINC00347-204ENST00000596240 KCNQ2O43526 872 aa11.07□□□□□ -0.64
LINC00347-204ENST00000596240 IL2RBP14784 551 aa11.07□□□□□ -0.64
LINC00347-204ENST00000596240 MTHFSP49914 203 aa11.07□□□□□ -0.64
LINC00347-204ENST00000596240 RRS1Q15050 365 aaKnown RBP11.07□□□□□ -0.64
LINC00347-204ENST00000596240 NLRP7Q8WX94 980 aa11.07□□□□□ -0.64
LINC00347-204ENST00000596240 ADAMTS8Q9UP79 889 aa11.07□□□□□ -0.64
LINC00347-204ENST00000596240 NUDCQ9Y266 331 aa11.07□□□□□ -0.64
LINC00347-204ENST00000596240 C5P01031 1676 aa11.07□□□□□ -0.64
LINC00347-204ENST00000596240 ZC3H15Q8WU90 426 aaKnown RBP11.06□□□□□ -0.64
LINC00347-204ENST00000596240 FLT4P35916 1363 aa11.05□□□□□ -0.64
LINC00347-204ENST00000596240 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
LINC00347-204ENST00000596240 EXOC5O00471 708 aa11.05□□□□□ -0.64
LINC00347-204ENST00000596240 NGEFQ8N5V2 710 aa11.05□□□□□ -0.64
LINC00347-204ENST00000596240 PXYLP1Q8TE99 480 aa11.05□□□□□ -0.64
LINC00347-204ENST00000596240 LTV1Q96GA3 475 aaPredicted RBP11.05□□□□□ -0.64
LINC00347-204ENST00000596240 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
LINC00347-204ENST00000596240 PDGFDQ9GZP0 370 aaPredicted RBP11.05□□□□□ -0.64
LINC00347-204ENST00000596240 KIF24Q5T7B8 1368 aa11.04□□□□□ -0.64
LINC00347-204ENST00000596240 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
LINC00347-204ENST00000596240 NEFLP07196 543 aa11.04□□□□□ -0.64
LINC00347-204ENST00000596240 SWT1Q5T5J6 900 aaKnown RBP11.04□□□□□ -0.64
LINC00347-204ENST00000596240 METTL3Q86U44 580 aaKnown RBP11.04□□□□□ -0.64
LINC00347-204ENST00000596240 ACSBG1Q96GR2 724 aa11.04□□□□□ -0.64
LINC00347-204ENST00000596240 RCCD1A6NED2 376 aa11.03□□□□□ -0.64
LINC00347-204ENST00000596240 TXNRD1Q16881 649 aa11.03□□□□□ -0.64
LINC00347-204ENST00000596240 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
LINC00347-204ENST00000596240 LRCH3Q96II8 777 aa11.03□□□□□ -0.64
LINC00347-204ENST00000596240 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
LINC00347-204ENST00000596240 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
LINC00347-204ENST00000596240 PNNQ9H307 717 aaKnown RBP11.02□□□□□ -0.65
LINC00347-204ENST00000596240 WBP1LQ9NX94 342 aa11.02□□□□□ -0.65
LINC00347-204ENST00000596240 HCSTQ9UBK5 93 aa11.02□□□□□ -0.65
LINC00347-204ENST00000596240 EMILIN1Q9Y6C2 1016 aa11.02□□□□□ -0.65
LINC00347-204ENST00000596240 VIRMAQ69YN4 1812 aaKnown RBP11.02□□□□□ -0.65
LINC00347-204ENST00000596240 AMPHP49418 695 aa11.01□□□□□ -0.65
LINC00347-204ENST00000596240 HSP90AB2PQ58FF8 381 aa11.01□□□□□ -0.65
LINC00347-204ENST00000596240 NBPF14Q5TI25 921 aa11.01□□□□□ -0.65
LINC00347-204ENST00000596240 NBPF6Q5VWK0 638 aa11.01□□□□□ -0.65
LINC00347-204ENST00000596240 NBPF4Q96M43 638 aa11.01□□□□□ -0.65
LINC00347-204ENST00000596240 HPS5Q9UPZ3 1129 aa11.01□□□□□ -0.65
LINC00347-204ENST00000596240 UBR3Q6ZT12 1888 aa11.01□□□□□ -0.65
LINC00347-204ENST00000596240 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
LINC00347-204ENST00000596240 MAP2K5Q13163 448 aa11□□□□□ -0.65
LINC00347-204ENST00000596240 ZNF827Q17R98 1081 aa11□□□□□ -0.65
LINC00347-204ENST00000596240 RUNDC1Q96C34 613 aa11□□□□□ -0.65
LINC00347-204ENST00000596240 LRRC4BQ9NT99 713 aa11□□□□□ -0.65
LINC00347-204ENST00000596240 RNF40O75150 1001 aa10.99□□□□□ -0.65
LINC00347-204ENST00000596240 ZMYND10O75800 440 aa10.99□□□□□ -0.65
LINC00347-204ENST00000596240 U2AF1L5P0DN76 240 aaPredicted RBP10.99□□□□□ -0.65
LINC00347-204ENST00000596240 DNAJB2P25686 324 aa10.99□□□□□ -0.65
LINC00347-204ENST00000596240 U2AF1Q01081 240 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00347-204ENST00000596240 TMEM134Q9H6X4 195 aa10.99□□□□□ -0.65
LINC00347-204ENST00000596240 POLKQ9UBT6 870 aa10.99□□□□□ -0.65
LINC00347-204ENST00000596240 SALL2Q9Y467 1007 aaPredicted RBP10.99□□□□□ -0.65
LINC00347-204ENST00000596240 C4BP0C0L5 1744 aa10.98□□□□□ -0.65
LINC00347-204ENST00000596240 IRF6O14896 467 aa10.98□□□□□ -0.65
LINC00347-204ENST00000596240 U2SURPO15042 1029 aaKnown RBP10.98□□□□□ -0.65
LINC00347-204ENST00000596240 PPM1GO15355 546 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms