RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 PCNTO95613 3336 aa24.96■■□□□ 1.59
PDE4C-208ENST00000595343 DICER1Q9UPY3 1922 aaKnown RBP24.96■■□□□ 1.59
PDE4C-208ENST00000595343 SRGNP10124 158 aa24.95■■□□□ 1.58
PDE4C-208ENST00000595343 TAOK3Q9H2K8 898 aa24.95■■□□□ 1.58
PDE4C-208ENST00000595343 PIP4K2AP48426 406 aaPredicted RBP24.94■■□□□ 1.58
PDE4C-208ENST00000595343 PRPF40BQ6NWY9 871 aaKnown RBP24.94■■□□□ 1.58
PDE4C-208ENST00000595343 BCORQ6W2J9 1755 aa24.94■■□□□ 1.58
PDE4C-208ENST00000595343 SLX4Q8IY92 1834 aa24.93■■□□□ 1.58
PDE4C-208ENST00000595343 PRAMEF22A3QJZ6 481 aa24.93■■□□□ 1.58
PDE4C-208ENST00000595343 MASTLQ96GX5 879 aa24.93■■□□□ 1.58
PDE4C-208ENST00000595343 CLEC4GQ6UXB4 293 aa24.92■■□□□ 1.58
PDE4C-208ENST00000595343 NUDCQ9Y266 331 aa24.92■■□□□ 1.58
PDE4C-208ENST00000595343 SNRPA1P09661 255 aaKnown RBP24.91■■□□□ 1.58
PDE4C-208ENST00000595343 SOGA3Q5TF21 947 aa24.91■■□□□ 1.58
PDE4C-208ENST00000595343 MCM10Q7L590 875 aa24.91■■□□□ 1.58
PDE4C-208ENST00000595343 RTF1Q92541 710 aaKnown RBP24.91■■□□□ 1.58
PDE4C-208ENST00000595343 NBPF5PQ86XG9 351 aaPredicted RBP24.9■■□□□ 1.58
PDE4C-208ENST00000595343 CACNA1SQ13698 1873 aa24.89■■□□□ 1.58
PDE4C-208ENST00000595343 DDNO94850 711 aaPredicted RBP24.89■■□□□ 1.58
PDE4C-208ENST00000595343 U2AF1L5P0DN76 240 aaPredicted RBP24.89■■□□□ 1.58
PDE4C-208ENST00000595343 U2AF1Q01081 240 aaKnown RBP eCLIP24.89■■□□□ 1.58
PDE4C-208ENST00000595343 ZNF652Q9Y2D9 606 aa24.89■■□□□ 1.58
PDE4C-208ENST00000595343 ARFGEF2Q9Y6D5 1785 aa24.88■■□□□ 1.57
PDE4C-208ENST00000595343 CHADLQ6NUI6 762 aa24.87■■□□□ 1.57
PDE4C-208ENST00000595343 C7orf43Q8WVR3 580 aa24.87■■□□□ 1.57
PDE4C-208ENST00000595343 HSPA1AP0DMV8 641 aaKnown RBP24.86■■□□□ 1.57
PDE4C-208ENST00000595343 HSPA1BP0DMV9 641 aaKnown RBP24.86■■□□□ 1.57
PDE4C-208ENST00000595343 NBPF26B4DH59 902 aa24.85■■□□□ 1.57
PDE4C-208ENST00000595343 POTEIP0CG38 1075 aa24.85■■□□□ 1.57
PDE4C-208ENST00000595343 POTEJP0CG39 1038 aa24.85■■□□□ 1.57
PDE4C-208ENST00000595343 NPR1P16066 1061 aa24.85■■□□□ 1.57
PDE4C-208ENST00000595343 PPP2R1AP30153 589 aa24.85■■□□□ 1.57
PDE4C-208ENST00000595343 DCTN1Q14203 1278 aa24.85■■□□□ 1.57
PDE4C-208ENST00000595343 NBPF10Q6P3W6 841 aaKnown RBP24.85■■□□□ 1.57
PDE4C-208ENST00000595343 TNS4Q8IZW8 715 aa24.85■■□□□ 1.57
PDE4C-208ENST00000595343 NBPF15Q8N660 670 aa24.85■■□□□ 1.57
PDE4C-208ENST00000595343 KLRG2A4D1S0 409 aaPredicted RBP24.84■■□□□ 1.57
PDE4C-208ENST00000595343 CCDC93Q567U6 631 aa24.84■■□□□ 1.57
PDE4C-208ENST00000595343 TPTE2Q6XPS3 522 aa24.84■■□□□ 1.57
PDE4C-208ENST00000595343 NIP7Q9Y221 180 aaKnown RBP eCLIP24.84■■□□□ 1.57
PDE4C-208ENST00000595343 RGL2O15211 777 aa24.83■■□□□ 1.57
PDE4C-208ENST00000595343 HTATSF1O43719 755 aaKnown RBP24.83■■□□□ 1.57
PDE4C-208ENST00000595343 CREBZFQ9NS37 354 aa24.83■■□□□ 1.57
PDE4C-208ENST00000595343 IQCA1LA6NCM1 817 aa24.81■■□□□ 1.56
PDE4C-208ENST00000595343 CAPN15O75808 1086 aa24.81■■□□□ 1.56
PDE4C-208ENST00000595343 L3MBTL3Q96JM7 780 aaPredicted RBP24.81■■□□□ 1.56
PDE4C-208ENST00000595343 FAM177BA6PVY3 158 aa24.8■■□□□ 1.56
PDE4C-208ENST00000595343 FKBP4Q02790 459 aaKnown RBP eCLIP24.8■■□□□ 1.56
PDE4C-208ENST00000595343 TAF7Q15545 349 aaPredicted RBP24.8■■□□□ 1.56
PDE4C-208ENST00000595343 HLFQ16534 295 aa24.79■■□□□ 1.56
PDE4C-208ENST00000595343 OLFM4Q6UX06 510 aa24.79■■□□□ 1.56
PDE4C-208ENST00000595343 ZNF277Q9NRM2 450 aaPredicted RBP24.79■■□□□ 1.56
PDE4C-208ENST00000595343 LDHDQ86WU2 507 aa24.78■■□□□ 1.56
PDE4C-208ENST00000595343 TAF1DQ9H5J8 278 aaPredicted RBP24.78■■□□□ 1.56
PDE4C-208ENST00000595343 MIS18AQ9NYP9 233 aa24.78■■□□□ 1.56
PDE4C-208ENST00000595343 MKRN1Q9UHC7 482 aaKnown RBP24.78■■□□□ 1.56
PDE4C-208ENST00000595343 RTKN2Q8IZC4 609 aa24.77■■□□□ 1.56
PDE4C-208ENST00000595343 SCN4AP35499 1836 aa24.77■■□□□ 1.56
PDE4C-208ENST00000595343 PASKQ96RG2 1323 aa24.76■■□□□ 1.55
PDE4C-208ENST00000595343 ZNF541Q9H0D2 1346 aa24.76■■□□□ 1.55
PDE4C-208ENST00000595343 GTF2E1P29083 439 aaPredicted RBP24.75■■□□□ 1.55
PDE4C-208ENST00000595343 ALDH1B1P30837 517 aa24.75■■□□□ 1.55
PDE4C-208ENST00000595343 LAMB4A4D0S4 1761 aa24.72■■□□□ 1.55
PDE4C-208ENST00000595343 CNTNAP1P78357 1384 aa24.72■■□□□ 1.55
PDE4C-208ENST00000595343 EAPPQ56P03 285 aaPredicted RBP24.72■■□□□ 1.55
PDE4C-208ENST00000595343 SYNE4Q8N205 404 aa24.72■■□□□ 1.55
PDE4C-208ENST00000595343 NGEFQ8N5V2 710 aa24.72■■□□□ 1.55
PDE4C-208ENST00000595343 HACL1Q9UJ83 578 aa24.72■■□□□ 1.55
PDE4C-208ENST00000595343 ERVV-1B6SEH8 477 aa24.71■■□□□ 1.55
PDE4C-208ENST00000595343 FZD9O00144 591 aa24.71■■□□□ 1.55
PDE4C-208ENST00000595343 ITGBL1O95965 494 aaPredicted RBP24.71■■□□□ 1.55
PDE4C-208ENST00000595343 IARSP41252 1262 aaKnown RBP24.71■■□□□ 1.55
PDE4C-208ENST00000595343 CRY2Q49AN0 593 aa24.71■■□□□ 1.55
PDE4C-208ENST00000595343 PNISRQ8TF01 805 aaKnown RBP24.71■■□□□ 1.55
PDE4C-208ENST00000595343 NYXQ9GZU5 481 aa24.71■■□□□ 1.55
PDE4C-208ENST00000595343 ABCC12Q96J65 1359 aa24.7■■□□□ 1.55
PDE4C-208ENST00000595343 NUTM1Q86Y26 1132 aa24.7■■□□□ 1.54
PDE4C-208ENST00000595343 MAP3K15Q6ZN16 1313 aa24.69■■□□□ 1.54
PDE4C-208ENST00000595343 NEFMP07197 916 aa24.69■■□□□ 1.54
PDE4C-208ENST00000595343 EPHX2P34913 555 aa24.69■■□□□ 1.54
PDE4C-208ENST00000595343 RRP7AQ9Y3A4 280 aaKnown RBP24.69■■□□□ 1.54
PDE4C-208ENST00000595343 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
PDE4C-208ENST00000595343 KDM3BQ7LBC6 1761 aa24.68■■□□□ 1.54
PDE4C-208ENST00000595343 TMEM88BA6NKF7 163 aa24.68■■□□□ 1.54
PDE4C-208ENST00000595343 EIF4A1P60842 406 aaKnown RBP24.68■■□□□ 1.54
PDE4C-208ENST00000595343 TTLL7Q6ZT98 887 aa24.68■■□□□ 1.54
PDE4C-208ENST00000595343 PSMD1Q99460 953 aa24.68■■□□□ 1.54
PDE4C-208ENST00000595343 CLEC11AQ9Y240 323 aa24.68■■□□□ 1.54
PDE4C-208ENST00000595343 RNF123Q5XPI4 1314 aa24.67■■□□□ 1.54
PDE4C-208ENST00000595343 DLG5Q8TDM6 1919 aa24.67■■□□□ 1.54
PDE4C-208ENST00000595343 PNMA8AQ86V59 439 aaPredicted RBP24.67■■□□□ 1.54
PDE4C-208ENST00000595343 NUP98P52948 1817 aa24.67■■□□□ 1.54
PDE4C-208ENST00000595343 KIF6Q6ZMV9 814 aa24.66■■□□□ 1.54
PDE4C-208ENST00000595343 GPC2Q8N158 579 aa24.66■■□□□ 1.54
PDE4C-208ENST00000595343 JDP2Q8WYK2 163 aa24.66■■□□□ 1.54
PDE4C-208ENST00000595343 PLEKHF1Q96S99 279 aa24.66■■□□□ 1.54
PDE4C-208ENST00000595343 ADAMTSL1Q8N6G6 1762 aa24.66■■□□□ 1.54
PDE4C-208ENST00000595343 FOXN1O15353 648 aa24.65■■□□□ 1.54
PDE4C-208ENST00000595343 MYL6BP14649 208 aa24.65■■□□□ 1.54
PDE4C-208ENST00000595343 GPTP24298 496 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms